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The map label for this gene is xylB [H]

Identifier: 92112777

GI number: 92112777

Start: 721722

End: 723218

Strand: Direct

Name: xylB [H]

Synonym: Csal_0644

Alternate gene names: 92112777

Gene position: 721722-723218 (Clockwise)

Preceding gene: 92112776

Following gene: 92112778

Centisome position: 19.52

GC content: 66.93

Gene sequence:

>1497_bases
ATGTACGTTGGCGTGGATTGTGGAACGCAAAGCACCAAGGTGGTGATCGTCGACGTCCAGCGCGCGGCGATCCTGGGCGA
GGCCAGCCGCCCGCATCATCTGATGGAAGGTGACGGCGGCCGACGCGAACAGGACGTGAACGAGTGGACGCAGGCCTTGA
CCGAGGCGTTTCACGAGGCGGTCGCCAAGGCCGGGATCCAGGCGCGCGAGATACGCGCCATCGGCGTCTCGGGGCAGCAG
CACGGCATGGTGGCCCTGGACGCCGACGGCCTTCCGTTGCACCCCGCGAAGCTGTGGTGCGATACCGAGACGGCGCTTCA
CAACGAGGCGTTGATCGAGCAACTCGGTGGCCGCGAGGGCTGCCTGGACAAGCTGGGCCTGGTGCTGCAAACCGGTTACA
CCGCCTCGAAGGTGGCGTGGCTGCGGGAGACGCATCCCGAGGCGTATCGGCGCATCGACACCTTGCTGCTGCCCCACGAT
TACCTCAACTTCTGGCTCACCGGCGAGCGTGTCGCCGAATGCGGCGATGCCTCGGGCACCGGCTATTTCGACACGCGAGC
GCGCGAGTGGCGACTCGACGTGTTCGAGACGCTGGCGCCGGAGCTCTCGCCGACGCGGGTGCTGCCTCGTCTGATCGACT
CCCGCGAGCCGGTGGGCACGGTGCGTCCCGACCTGGCCCGCGAGCTGGGGCTGGCCGATGACGTGCTGGTGGCCAGCGGG
GGCGGCGACAACATGATGGCGGCGATCGGTACCGGTAACATCGCGCCCGGCATGGTGACCTTGAGCCTGGGCACCTCGGG
GACCGTGTATGCCCATTCGGACGCCCCGGTGGAAGCGGAGGACGCCCAGGTCGCCAATTTCTGCGCCAGCCACGGTGGCT
GGCTGCCGCTGATATGCACCATGAACGTCACCTCGGCGACGACCAAGGTACGCGAGTTGCTGGGGCTCGATCTGGAAGCC
TTTGGCGAGTGCGTGGCCAGGGCGCCGCTGGGTGCCGAGGGCGTGATGGCCTTGCCATTCTTCAACGGCGAGCGCGTGCC
GGCATTGCCGCATGCCTCGGCCAGTTTCGTGGGCATGACGAGTCTCAATACCACGCAGGACAATCTGTGCCGAGCGGTAG
TCGAAGGGACGACGTTCGGGCTACGCTATGGGTTCGAGCGATTGGGCGATCTGGCATCCCGGGCCAGCCAAGTGCGTCTG
GTCGGTGGTGGCGCCAAGAGTCCGGTATGGCGCCAGATCGTCGCCGATGTCTTGGATGTCGACGTGATCTGTCCCCGCAT
CACTGAAGCCGCCGCACTGGGCGGGGCGATTCAGGCCGCATGGTGCGATACCCTGGCACGCGGGACGGGCGAGTCGCTGT
CGGCGCTTACCGAACGGCTCGTCGAGGTGGATCTCGACACCCTCACCCGCCCGCGTGGCGAACCGGTGCGCCGTTATCAG
GAACTTTACCAGCGTTACCGTCAGGCGCTGGCCGAACGCTACGACGTCGCGCCATGA

Upstream 100 bases:

>100_bases
GCACGAGGTGGTCGAGGGGCGTATGGCGTCACGCGACTAGGCAGCGGATACTCGAGGTCTTGCCCCATGCGGGCCATACA
CTGCAGCGCAAGGAGAGAGC

Downstream 100 bases:

>100_bases
GACGCGACCCATGACCCTTTTCGTTACAGGACATTTGCCATGACGCAACTCGAGGCTCTCAAGCAACTTTCGATGGTGGT
CGCCGATACCGGCGATCTCG

Product: xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MYVGVDCGTQSTKVVIVDVQRAAILGEASRPHHLMEGDGGRREQDVNEWTQALTEAFHEAVAKAGIQAREIRAIGVSGQQ
HGMVALDADGLPLHPAKLWCDTETALHNEALIEQLGGREGCLDKLGLVLQTGYTASKVAWLRETHPEAYRRIDTLLLPHD
YLNFWLTGERVAECGDASGTGYFDTRAREWRLDVFETLAPELSPTRVLPRLIDSREPVGTVRPDLARELGLADDVLVASG
GGDNMMAAIGTGNIAPGMVTLSLGTSGTVYAHSDAPVEAEDAQVANFCASHGGWLPLICTMNVTSATTKVRELLGLDLEA
FGECVARAPLGAEGVMALPFFNGERVPALPHASASFVGMTSLNTTQDNLCRAVVEGTTFGLRYGFERLGDLASRASQVRL
VGGGAKSPVWRQIVADVLDVDVICPRITEAAALGGAIQAAWCDTLARGTGESLSALTERLVEVDLDTLTRPRGEPVRRYQ
ELYQRYRQALAERYDVAP

Sequences:

>Translated_498_residues
MYVGVDCGTQSTKVVIVDVQRAAILGEASRPHHLMEGDGGRREQDVNEWTQALTEAFHEAVAKAGIQAREIRAIGVSGQQ
HGMVALDADGLPLHPAKLWCDTETALHNEALIEQLGGREGCLDKLGLVLQTGYTASKVAWLRETHPEAYRRIDTLLLPHD
YLNFWLTGERVAECGDASGTGYFDTRAREWRLDVFETLAPELSPTRVLPRLIDSREPVGTVRPDLARELGLADDVLVASG
GGDNMMAAIGTGNIAPGMVTLSLGTSGTVYAHSDAPVEAEDAQVANFCASHGGWLPLICTMNVTSATTKVRELLGLDLEA
FGECVARAPLGAEGVMALPFFNGERVPALPHASASFVGMTSLNTTQDNLCRAVVEGTTFGLRYGFERLGDLASRASQVRL
VGGGAKSPVWRQIVADVLDVDVICPRITEAAALGGAIQAAWCDTLARGTGESLSALTERLVEVDLDTLTRPRGEPVRRYQ
ELYQRYRQALAERYDVAP
>Mature_498_residues
MYVGVDCGTQSTKVVIVDVQRAAILGEASRPHHLMEGDGGRREQDVNEWTQALTEAFHEAVAKAGIQAREIRAIGVSGQQ
HGMVALDADGLPLHPAKLWCDTETALHNEALIEQLGGREGCLDKLGLVLQTGYTASKVAWLRETHPEAYRRIDTLLLPHD
YLNFWLTGERVAECGDASGTGYFDTRAREWRLDVFETLAPELSPTRVLPRLIDSREPVGTVRPDLARELGLADDVLVASG
GGDNMMAAIGTGNIAPGMVTLSLGTSGTVYAHSDAPVEAEDAQVANFCASHGGWLPLICTMNVTSATTKVRELLGLDLEA
FGECVARAPLGAEGVMALPFFNGERVPALPHASASFVGMTSLNTTQDNLCRAVVEGTTFGLRYGFERLGDLASRASQVRL
VGGGAKSPVWRQIVADVLDVDVICPRITEAAALGGAIQAAWCDTLARGTGESLSALTERLVEVDLDTLTRPRGEPVRRYQ
ELYQRYRQALAERYDVAP

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI42794763, Length=453, Percent_Identity=23.841059602649, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI18860918, Length=480, Percent_Identity=22.2916666666667, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI189409120, Length=453, Percent_Identity=23.841059602649, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI4504007, Length=453, Percent_Identity=23.841059602649, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI41393575, Length=454, Percent_Identity=24.2290748898678, Blast_Score=82, Evalue=2e-15,
Organism=Escherichia coli, GI1789987, Length=501, Percent_Identity=31.7365269461078, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1787789, Length=521, Percent_Identity=26.295585412668, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1790005, Length=505, Percent_Identity=24.5544554455446, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1789168, Length=444, Percent_Identity=26.1261261261261, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1790361, Length=477, Percent_Identity=24.9475890985325, Blast_Score=89, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17554530, Length=475, Percent_Identity=22.5263157894737, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17535599, Length=454, Percent_Identity=22.2466960352423, Blast_Score=88, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6321633, Length=396, Percent_Identity=22.979797979798, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21356607, Length=539, Percent_Identity=22.2634508348794, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI19920476, Length=485, Percent_Identity=22.0618556701031, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24655555, Length=427, Percent_Identity=21.0772833723653, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24655560, Length=427, Percent_Identity=21.0772833723653, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24655570, Length=427, Percent_Identity=21.0772833723653, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24655574, Length=427, Percent_Identity=21.0772833723653, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24655565, Length=427, Percent_Identity=21.0772833723653, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 53643; Mature: 53643

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVGVDCGTQSTKVVIVDVQRAAILGEASRPHHLMEGDGGRREQDVNEWTQALTEAFHEA
CEEEEECCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VAKAGIQAREIRAIGVSGQQHGMVALDADGLPLHPAKLWCDTETALHNEALIEQLGGREG
HHHCCCCCHHEEEEECCCCCCCEEEECCCCCCCCCHHEEECCHHHHHHHHHHHHHCCCCC
CLDKLGLVLQTGYTASKVAWLRETHPEAYRRIDTLLLPHDYLNFWLTGERVAECGDASGT
CHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHEEECHHHHHHCCCCCCC
GYFDTRAREWRLDVFETLAPELSPTRVLPRLIDSREPVGTVRPDLARELGLADDVLVASG
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEECC
GGDNMMAAIGTGNIAPGMVTLSLGTSGTVYAHSDAPVEAEDAQVANFCASHGGWLPLICT
CCCCEEEEECCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEE
MNVTSATTKVRELLGLDLEAFGECVARAPLGAEGVMALPFFNGERVPALPHASASFVGMT
ECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEE
SLNTTQDNLCRAVVEGTTFGLRYGFERLGDLASRASQVRLVGGGAKSPVWRQIVADVLDV
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHH
DVICPRITEAAALGGAIQAAWCDTLARGTGESLSALTERLVEVDLDTLTRPRGEPVRRYQ
HHHCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ELYQRYRQALAERYDVAP
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYVGVDCGTQSTKVVIVDVQRAAILGEASRPHHLMEGDGGRREQDVNEWTQALTEAFHEA
CEEEEECCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VAKAGIQAREIRAIGVSGQQHGMVALDADGLPLHPAKLWCDTETALHNEALIEQLGGREG
HHHCCCCCHHEEEEECCCCCCCEEEECCCCCCCCCHHEEECCHHHHHHHHHHHHHCCCCC
CLDKLGLVLQTGYTASKVAWLRETHPEAYRRIDTLLLPHDYLNFWLTGERVAECGDASGT
CHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHEEECHHHHHHCCCCCCC
GYFDTRAREWRLDVFETLAPELSPTRVLPRLIDSREPVGTVRPDLARELGLADDVLVASG
CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEECC
GGDNMMAAIGTGNIAPGMVTLSLGTSGTVYAHSDAPVEAEDAQVANFCASHGGWLPLICT
CCCCEEEEECCCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEE
MNVTSATTKVRELLGLDLEAFGECVARAPLGAEGVMALPFFNGERVPALPHASASFVGMT
ECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEE
SLNTTQDNLCRAVVEGTTFGLRYGFERLGDLASRASQVRLVGGGAKSPVWRQIVADVLDV
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHH
DVICPRITEAAALGGAIQAAWCDTLARGTGESLSALTERLVEVDLDTLTRPRGEPVRRYQ
HHHCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ELYQRYRQALAERYDVAP
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]