| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is sglT [H]
Identifier: 92112390
GI number: 92112390
Start: 290655
End: 292283
Strand: Direct
Name: sglT [H]
Synonym: Csal_0255
Alternate gene names: 92112390
Gene position: 290655-292283 (Clockwise)
Preceding gene: 92112387
Following gene: 92112391
Centisome position: 7.86
GC content: 64.95
Gene sequence:
>1629_bases GTGAGCGAGTTTACCTGGCTGGATAGCGTCGTCTTGGTGGTGTACATCCTGCTCGTGGCGCTGATAGGCGCGCGTTTCGG GCGGAGCCAGCAGAGTACCCAGGATTATTTCCTGGGCGGTCGGCGAATTCCCGGCTGGGCGATCGGGCTGTCGGTGATGG CGACCCAGGCCAGCGCGATCACCTTCATCGGCGCTCCCGGCTGGGGGTTCGAGGGCGGCCTGGAGCGGCTGGTGACGTTC CTCAACGTGCCGCTGGCGATGGCGGTGCTGATCTTTCTGCTGGTGCCCGTGTTTCATCGCGCGGGCATCTACAGCATCTA CGAGCTTCTCGAGCGTCGCTTCGGGCCGGCCACGCGCAGCGTGAGCGCAGGTCTGTTCCTGGTGGCACGCGGCCTGGCGA CCGGCGTGGTGCTTTATGCGCCGGCACTGGTGCTCTCGGTGGTGACCGGCTGGAGCGTCAACCTGACCATCGTGGTCATG GCGGTGCTGGCGGTGAGCTACACGGTGCTGGGCGGTATCAGTGCAGTGATCTGGACCGACGTGATCCAGATGTTCGTGCT GTGGCTGGGCGCCCTGGTCAGCATGGGATTGATGGTGGCGAGTCTGCCCGGTGGCTGGAGCGATGTCTTTGCCTTCGGTG CAGCACAGGGGATGTTCGACACCCTGGACCTGTCGCTGGACCCCGGGGTGACTTATTCGCTGTGGGCCGGCCTGTTCGGC GGCATCTTCCTGCATATCGCGTATTTCGGCACCGACCAGAGCCAGATTCAGCGGGTCCTGACCAGCCCCGATGTGCAGCA GGGACAGCGCTCACTGTTGATCGGCGGGTACCTGCTGGTGCCGCAGATGTTGCTGTTCTTGTTCATCGGGGTGATGTTGG CGACCTACTACGACCAGCACGGCCTTGCCGCGCCGGACAACCTCAACGAGCTGTTCCCGCGCTATGTGGTCAGCGCCTTT CCGCCGGGTCTGGCCGGTCTGGTGATTGCCGGTGTCTTCGCGGCGGCGATGTCGAGTCTCGACTCGGCGCTCAATTCGCT GTCGGCGGTGAGCGTGCGCGATTTCTATACGCGATATGTCAGGCCCGACGCCAGCGAGGCGCATTATCTCAAGGCCTCGC GCTGGGCGACGGTCTTCTGGGGCCTGTATGCGACGGTCTTCGCGTTCTTCGCCGGTAACCTGGGGCCGGTGATCGAGGCG GTCAATCGTATCGGGTCCTGGTTCTACGGCGCCCTGCTGGGCACCTTCCTGCTGGCCATGCTCAGCCATCGCACCAATGC CCGCGGTGCGCTGAGCGGCCTGGTGCTGGGCATGGTCTCGGTGTGGGGCGTCGAAAGCCTCTTCGATATCTCCTGGCTTT ACAACAATCTGGTGGGAGTGGTGGTGTCGCTCGGCGTAGGGTATGTCGTCGGTCTGACGGCGCCTGCCCCGAGCGCGGCG CAATTGCGCGACGTGGTCATCGAGGAAACCGCCCCGGATATGCAGGCGTTGCTGGCGACGCGCGCCGCCCGTGCCCGGTC GATCACGCCGGCGGCACGCCTGACACGTCGCCGCTGTATCGGGCTGGTGGCATGGTTCTGTCTGTTGCTGGCGGGTCTGG CACTGTTGCAGGGGTGGGCCAATGCCTGA
Upstream 100 bases:
>100_bases ATGCGATTCGGGACCGGACGGCACCCATGGCGTGCCGATCGGCAGCCTGGAAAGAAGCCTGCTAATTTGGATAGCCAGGT GGATCACAAAGGGGCGGGTC
Downstream 100 bases:
>100_bases GGCGCTTCCCCTGAGACTGCCTCGGCGACTCGATGCCCTGCAGGCCGAGACGCGCCTGCGTCGCCTGCGCGCCGAGACCT TCGAGGCGGCGACGCTCACG
Product: SSS family solute/sodium (Na+) symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MSEFTWLDSVVLVVYILLVALIGARFGRSQQSTQDYFLGGRRIPGWAIGLSVMATQASAITFIGAPGWGFEGGLERLVTF LNVPLAMAVLIFLLVPVFHRAGIYSIYELLERRFGPATRSVSAGLFLVARGLATGVVLYAPALVLSVVTGWSVNLTIVVM AVLAVSYTVLGGISAVIWTDVIQMFVLWLGALVSMGLMVASLPGGWSDVFAFGAAQGMFDTLDLSLDPGVTYSLWAGLFG GIFLHIAYFGTDQSQIQRVLTSPDVQQGQRSLLIGGYLLVPQMLLFLFIGVMLATYYDQHGLAAPDNLNELFPRYVVSAF PPGLAGLVIAGVFAAAMSSLDSALNSLSAVSVRDFYTRYVRPDASEAHYLKASRWATVFWGLYATVFAFFAGNLGPVIEA VNRIGSWFYGALLGTFLLAMLSHRTNARGALSGLVLGMVSVWGVESLFDISWLYNNLVGVVVSLGVGYVVGLTAPAPSAA QLRDVVIEETAPDMQALLATRAARARSITPAARLTRRRCIGLVAWFCLLLAGLALLQGWANA
Sequences:
>Translated_542_residues MSEFTWLDSVVLVVYILLVALIGARFGRSQQSTQDYFLGGRRIPGWAIGLSVMATQASAITFIGAPGWGFEGGLERLVTF LNVPLAMAVLIFLLVPVFHRAGIYSIYELLERRFGPATRSVSAGLFLVARGLATGVVLYAPALVLSVVTGWSVNLTIVVM AVLAVSYTVLGGISAVIWTDVIQMFVLWLGALVSMGLMVASLPGGWSDVFAFGAAQGMFDTLDLSLDPGVTYSLWAGLFG GIFLHIAYFGTDQSQIQRVLTSPDVQQGQRSLLIGGYLLVPQMLLFLFIGVMLATYYDQHGLAAPDNLNELFPRYVVSAF PPGLAGLVIAGVFAAAMSSLDSALNSLSAVSVRDFYTRYVRPDASEAHYLKASRWATVFWGLYATVFAFFAGNLGPVIEA VNRIGSWFYGALLGTFLLAMLSHRTNARGALSGLVLGMVSVWGVESLFDISWLYNNLVGVVVSLGVGYVVGLTAPAPSAA QLRDVVIEETAPDMQALLATRAARARSITPAARLTRRRCIGLVAWFCLLLAGLALLQGWANA >Mature_541_residues SEFTWLDSVVLVVYILLVALIGARFGRSQQSTQDYFLGGRRIPGWAIGLSVMATQASAITFIGAPGWGFEGGLERLVTFL NVPLAMAVLIFLLVPVFHRAGIYSIYELLERRFGPATRSVSAGLFLVARGLATGVVLYAPALVLSVVTGWSVNLTIVVMA VLAVSYTVLGGISAVIWTDVIQMFVLWLGALVSMGLMVASLPGGWSDVFAFGAAQGMFDTLDLSLDPGVTYSLWAGLFGG IFLHIAYFGTDQSQIQRVLTSPDVQQGQRSLLIGGYLLVPQMLLFLFIGVMLATYYDQHGLAAPDNLNELFPRYVVSAFP PGLAGLVIAGVFAAAMSSLDSALNSLSAVSVRDFYTRYVRPDASEAHYLKASRWATVFWGLYATVFAFFAGNLGPVIEAV NRIGSWFYGALLGTFLLAMLSHRTNARGALSGLVLGMVSVWGVESLFDISWLYNNLVGVVVSLGVGYVVGLTAPAPSAAQ LRDVVIEETAPDMQALLATRAARARSITPAARLTRRRCIGLVAWFCLLLAGLALLQGWANA
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI256985183, Length=454, Percent_Identity=33.0396475770925, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI157671931, Length=457, Percent_Identity=29.3216630196937, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI167466278, Length=447, Percent_Identity=30.8724832214765, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI4507035, Length=416, Percent_Identity=30.7692307692308, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI14140236, Length=467, Percent_Identity=25.0535331905782, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI4507033, Length=469, Percent_Identity=27.9317697228145, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI17941285, Length=461, Percent_Identity=26.2472885032538, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI4507031, Length=460, Percent_Identity=26.5217391304348, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI206597483, Length=448, Percent_Identity=27.6785714285714, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI110835708, Length=557, Percent_Identity=25.1346499102334, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI109659836, Length=467, Percent_Identity=26.9807280513919, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI109659839, Length=483, Percent_Identity=26.0869565217391, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI206597487, Length=478, Percent_Identity=25.5230125523013, Blast_Score=111, Evalue=1e-24, Organism=Escherichia coli, GI1790113, Length=482, Percent_Identity=22.4066390041494, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI87082237, Length=463, Percent_Identity=25.4859611231102, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787251, Length=510, Percent_Identity=24.1176470588235, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1790503, Length=460, Percent_Identity=24.1304347826087, Blast_Score=63, Evalue=5e-11, Organism=Caenorhabditis elegans, GI32566512, Length=382, Percent_Identity=27.2251308900524, Blast_Score=131, Evalue=8e-31, Organism=Caenorhabditis elegans, GI115533094, Length=420, Percent_Identity=27.8571428571429, Blast_Score=131, Evalue=9e-31, Organism=Caenorhabditis elegans, GI115533096, Length=312, Percent_Identity=28.8461538461538, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17539284, Length=473, Percent_Identity=24.5243128964059, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI28573698, Length=450, Percent_Identity=31.3333333333333, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI24651739, Length=457, Percent_Identity=30.1969365426696, Blast_Score=206, Evalue=5e-53, Organism=Drosophila melanogaster, GI281362918, Length=452, Percent_Identity=30.5309734513274, Blast_Score=188, Evalue=7e-48, Organism=Drosophila melanogaster, GI24651741, Length=461, Percent_Identity=26.4642082429501, Blast_Score=185, Evalue=9e-47, Organism=Drosophila melanogaster, GI24645928, Length=448, Percent_Identity=31.6964285714286, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI221459588, Length=468, Percent_Identity=29.2735042735043, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI221459586, Length=466, Percent_Identity=28.755364806867, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI221459584, Length=467, Percent_Identity=28.6937901498929, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24641117, Length=444, Percent_Identity=30.4054054054054, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI28574994, Length=442, Percent_Identity=26.4705882352941, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI24640370, Length=479, Percent_Identity=27.348643006263, Blast_Score=155, Evalue=9e-38, Organism=Drosophila melanogaster, GI24650192, Length=448, Percent_Identity=27.0089285714286, Blast_Score=152, Evalue=7e-37, Organism=Drosophila melanogaster, GI221459582, Length=452, Percent_Identity=27.6548672566372, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI19920916, Length=425, Percent_Identity=26.1176470588235, Blast_Score=128, Evalue=9e-30, Organism=Drosophila melanogaster, GI221379702, Length=414, Percent_Identity=26.0869565217391, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI281362054, Length=364, Percent_Identity=28.8461538461538, Blast_Score=126, Evalue=5e-29, Organism=Drosophila melanogaster, GI281362052, Length=364, Percent_Identity=28.8461538461538, Blast_Score=126, Evalue=5e-29, Organism=Drosophila melanogaster, GI281362050, Length=364, Percent_Identity=28.8461538461538, Blast_Score=126, Evalue=5e-29, Organism=Drosophila melanogaster, GI24648056, Length=364, Percent_Identity=28.8461538461538, Blast_Score=126, Evalue=5e-29, Organism=Drosophila melanogaster, GI21356827, Length=364, Percent_Identity=28.8461538461538, Blast_Score=126, Evalue=5e-29, Organism=Drosophila melanogaster, GI161076631, Length=415, Percent_Identity=26.0240963855422, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI281364280, Length=336, Percent_Identity=26.1904761904762, Blast_Score=114, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 58141; Mature: 58010
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFTWLDSVVLVVYILLVALIGARFGRSQQSTQDYFLGGRRIPGWAIGLSVMATQASAI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHE TFIGAPGWGFEGGLERLVTFLNVPLAMAVLIFLLVPVFHRAGIYSIYELLERRFGPATRS EEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH VSAGLFLVARGLATGVVLYAPALVLSVVTGWSVNLTIVVMAVLAVSYTVLGGISAVIWTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VIQMFVLWLGALVSMGLMVASLPGGWSDVFAFGAAQGMFDTLDLSLDPGVTYSLWAGLFG HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHH GIFLHIAYFGTDQSQIQRVLTSPDVQQGQRSLLIGGYLLVPQMLLFLFIGVMLATYYDQH HHHHHHHHHCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLAAPDNLNELFPRYVVSAFPPGLAGLVIAGVFAAAMSSLDSALNSLSAVSVRDFYTRYV CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPDASEAHYLKASRWATVFWGLYATVFAFFAGNLGPVIEAVNRIGSWFYGALLGTFLLAM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSHRTNARGALSGLVLGMVSVWGVESLFDISWLYNNLVGVVVSLGVGYVVGLTAPAPSAA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH QLRDVVIEETAPDMQALLATRAARARSITPAARLTRRRCIGLVAWFCLLLAGLALLQGWA HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NA CC >Mature Secondary Structure SEFTWLDSVVLVVYILLVALIGARFGRSQQSTQDYFLGGRRIPGWAIGLSVMATQASAI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHE TFIGAPGWGFEGGLERLVTFLNVPLAMAVLIFLLVPVFHRAGIYSIYELLERRFGPATRS EEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHH VSAGLFLVARGLATGVVLYAPALVLSVVTGWSVNLTIVVMAVLAVSYTVLGGISAVIWTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VIQMFVLWLGALVSMGLMVASLPGGWSDVFAFGAAQGMFDTLDLSLDPGVTYSLWAGLFG HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHH GIFLHIAYFGTDQSQIQRVLTSPDVQQGQRSLLIGGYLLVPQMLLFLFIGVMLATYYDQH HHHHHHHHHCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLAAPDNLNELFPRYVVSAFPPGLAGLVIAGVFAAAMSSLDSALNSLSAVSVRDFYTRYV CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPDASEAHYLKASRWATVFWGLYATVFAFFAGNLGPVIEAVNRIGSWFYGALLGTFLLAM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LSHRTNARGALSGLVLGMVSVWGVESLFDISWLYNNLVGVVVSLGVGYVVGLTAPAPSAA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH QLRDVVIEETAPDMQALLATRAARARSITPAARLTRRRCIGLVAWFCLLLAGLALLQGWA HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]