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The map label for this gene is ygcJ [H]

Identifier: 92112364

GI number: 92112364

Start: 260737

End: 261843

Strand: Direct

Name: ygcJ [H]

Synonym: Csal_0229

Alternate gene names: 92112364

Gene position: 260737-261843 (Clockwise)

Preceding gene: 92112363

Following gene: 92112365

Centisome position: 7.05

GC content: 57.0

Gene sequence:

>1107_bases
ATGAGCCACTTCATTCAGTTGCATCTACTAACTTCTTATCCGCCCTCCAACCTCAACCGTGACGATCTGGGCCGTCCCAA
GACGGCGTTCATGGGTGGCGCGCGCCGTTTGCGCGTCTCCTCCCAGAGTCTCAAGCGGAATTGGCGCACCTCGACGCTCT
TCGAGGAAGCGGTCGATGGTCACAGGGGAACGCGCACCAAGCGATTGGGTAAGCAGGTATTCGATCGCATGAAAGATGCT
GGTGCTGACGACAAAATCGCCGGTAGTAGTGCTGAAAAGATCGCGAGTATCTTCGGTACGCTGCGCAAGGTTGGAAAGGG
TGAGAAGCACGAATTCGAGATCGAGCAGCTCGTTCATGTCGGGCCGGAAGAGATTGCGGCGCTGGAAACACTGGCCAATA
CATTGGGGGCAGAAAAGCGCGAGCCGACTGACGAAGAGATCACGAATGTTCTCCTGCGACGCCCGACAGCCGTCGATATT
GCGCTCTTTGGACGTATGCTCACCGGGGAAAAAAATAAGCTCGTCAAATACAGTGTAGAGGCTGCCTGCCAGGTCGCGCA
CGCTATTACCGTCCATGCCGCCGAGGTCGAGGACGACTACTTCACCGCAGTCGACGATCTCAATACCGGCGATGAGGATC
GTGGCGCAGCGCATATCGGTGAGGCCGGTTTTGCCGCCGGGCTGTTTTATCTCTACCTCTGCATTGATCGCGATCTACTG
GTCGAGAATCTGCAAGGCAATGCGGACTTGGCCGATCGCGCCATTGCTGCGCTGGTTGAATCCGCCGTCAAGGTTTCGCC
CAAGGGCAAGCAGAACAGTTTCGGCTCTCGCGCCCACGCCAGTTATCTGCTGGCAGAAAAAGGCGATCAGCAGCCGCGCT
CGTTGTCGGCCTCCTTCCTGCAGCCGGTCAATGGTGAAGGACAAGCGATCAAGGCCATCAGCAAACTGGAACGCCAGGCT
CAGGCTTTCGATGATGCTTATGGTGCCGGCGCCGACAGTCGCTTTGTTCTCTCTGCCGAGCCGGATTATGAAAAGCCTCC
GCTGAAGGGTGACGTCCAAACGGGAAATCTGCAGGACCTGCTGACTTTCCTCAAGGGCGATGACTAA

Upstream 100 bases:

>100_bases
ACTTCAAGGCGCGCTCTCAGAAAATGGCAACGAGCGACTGATCCTTCGGCCAAGGACGCCATCGGCCACTACCCATCATT
ACCATTGCAGGGGACCTTTC

Downstream 100 bases:

>100_bases
GCGGAGGCGATATGACGGGACATCTGGTCTTTCGGCTCTATGCGCCGATGGCGAGCTGGGGCGAAGCTGCGGTAGGGGAG
GCGCGGCCGACCGCGACGTA

Product: CRISPR-associated Cse4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSHFIQLHLLTSYPPSNLNRDDLGRPKTAFMGGARRLRVSSQSLKRNWRTSTLFEEAVDGHRGTRTKRLGKQVFDRMKDA
GADDKIAGSSAEKIASIFGTLRKVGKGEKHEFEIEQLVHVGPEEIAALETLANTLGAEKREPTDEEITNVLLRRPTAVDI
ALFGRMLTGEKNKLVKYSVEAACQVAHAITVHAAEVEDDYFTAVDDLNTGDEDRGAAHIGEAGFAAGLFYLYLCIDRDLL
VENLQGNADLADRAIAALVESAVKVSPKGKQNSFGSRAHASYLLAEKGDQQPRSLSASFLQPVNGEGQAIKAISKLERQA
QAFDDAYGAGADSRFVLSAEPDYEKPPLKGDVQTGNLQDLLTFLKGDD

Sequences:

>Translated_368_residues
MSHFIQLHLLTSYPPSNLNRDDLGRPKTAFMGGARRLRVSSQSLKRNWRTSTLFEEAVDGHRGTRTKRLGKQVFDRMKDA
GADDKIAGSSAEKIASIFGTLRKVGKGEKHEFEIEQLVHVGPEEIAALETLANTLGAEKREPTDEEITNVLLRRPTAVDI
ALFGRMLTGEKNKLVKYSVEAACQVAHAITVHAAEVEDDYFTAVDDLNTGDEDRGAAHIGEAGFAAGLFYLYLCIDRDLL
VENLQGNADLADRAIAALVESAVKVSPKGKQNSFGSRAHASYLLAEKGDQQPRSLSASFLQPVNGEGQAIKAISKLERQA
QAFDDAYGAGADSRFVLSAEPDYEKPPLKGDVQTGNLQDLLTFLKGDD
>Mature_367_residues
SHFIQLHLLTSYPPSNLNRDDLGRPKTAFMGGARRLRVSSQSLKRNWRTSTLFEEAVDGHRGTRTKRLGKQVFDRMKDAG
ADDKIAGSSAEKIASIFGTLRKVGKGEKHEFEIEQLVHVGPEEIAALETLANTLGAEKREPTDEEITNVLLRRPTAVDIA
LFGRMLTGEKNKLVKYSVEAACQVAHAITVHAAEVEDDYFTAVDDLNTGDEDRGAAHIGEAGFAAGLFYLYLCIDRDLLV
ENLQGNADLADRAIAALVESAVKVSPKGKQNSFGSRAHASYLLAEKGDQQPRSLSASFLQPVNGEGQAIKAISKLERQAQ
AFDDAYGAGADSRFVLSAEPDYEKPPLKGDVQTGNLQDLLTFLKGDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789116, Length=396, Percent_Identity=31.3131313131313, Blast_Score=131, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010148 [H]

Pfam domain/function: PF09344 Cas_CT1975 [H]

EC number: NA

Molecular weight: Translated: 40099; Mature: 39968

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFIQLHLLTSYPPSNLNRDDLGRPKTAFMGGARRLRVSSQSLKRNWRTSTLFEEAVDG
CCCEEEEEEEECCCCCCCCHHHCCCCHHHHHCCCHHEEECHHHHHHCCCHHHHHHHHHCC
HRGTRTKRLGKQVFDRMKDAGADDKIAGSSAEKIASIFGTLRKVGKGEKHEFEIEQLVHV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
GPEEIAALETLANTLGAEKREPTDEEITNVLLRRPTAVDIALFGRMLTGEKNKLVKYSVE
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEHHHH
AACQVAHAITVHAAEVEDDYFTAVDDLNTGDEDRGAAHIGEAGFAAGLFYLYLCIDRDLL
HHHHHHHHHHEEEECCCCCHHHHHHCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHH
VENLQGNADLADRAIAALVESAVKVSPKGKQNSFGSRAHASYLLAEKGDQQPRSLSASFL
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
QPVNGEGQAIKAISKLERQAQAFDDAYGAGADSRFVLSAEPDYEKPPLKGDVQTGNLQDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHH
LTFLKGDD
HHHHCCCC
>Mature Secondary Structure 
SHFIQLHLLTSYPPSNLNRDDLGRPKTAFMGGARRLRVSSQSLKRNWRTSTLFEEAVDG
CCEEEEEEEECCCCCCCCHHHCCCCHHHHHCCCHHEEECHHHHHHCCCHHHHHHHHHCC
HRGTRTKRLGKQVFDRMKDAGADDKIAGSSAEKIASIFGTLRKVGKGEKHEFEIEQLVHV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
GPEEIAALETLANTLGAEKREPTDEEITNVLLRRPTAVDIALFGRMLTGEKNKLVKYSVE
CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEHHHH
AACQVAHAITVHAAEVEDDYFTAVDDLNTGDEDRGAAHIGEAGFAAGLFYLYLCIDRDLL
HHHHHHHHHHEEEECCCCCHHHHHHCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHH
VENLQGNADLADRAIAALVESAVKVSPKGKQNSFGSRAHASYLLAEKGDQQPRSLSASFL
HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
QPVNGEGQAIKAISKLERQAQAFDDAYGAGADSRFVLSAEPDYEKPPLKGDVQTGNLQDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHH
LTFLKGDD
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]