Definition Nitrobacter hamburgensis X14 plasmid 3, complete sequence.
Accession NC_007961
Length 121,408

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The map label for this gene is 92109709

Identifier: 92109709

GI number: 92109709

Start: 46083

End: 46616

Strand: Reverse

Name: 92109709

Synonym: Nham_4593

Alternate gene names: NA

Gene position: 46616-46083 (Counterclockwise)

Preceding gene: 92109710

Following gene: 92109708

Centisome position: 38.4

GC content: 56.18

Gene sequence:

>534_bases
TTGGCAGCGCTTCCAGCGTGCAAAGGCGTATGGCTGGTCCGGCAGTTTCCCAAGCTTCGGCCTGTCGATCTCGACGAAGA
GTTCGACGCGGCTGGAGCCGAAGCCGCGCATCTGGCGACCATTGAGTTCGGCGACGAGCACGCGGATGGCGGCGTTCAGC
TCTGCCAGGTAAAAGAAGCGCTGATTGCGCAGACGCGCCAGGACCCAGCGCTGGGCAATTTGCACGGCGACTTCGACTTT
GGCCTTATGCGGCGCAAAGTATCTTTGGACATACCGAAAGATGACGGAACAATACTCGAGGTTCCGAATAGGCCCGCCTG
CGCCCTCGATGGGCGTTTTTGGTGGAGCGTGCGGGTGGTTGTTCGGATGATGCGAACTCGAGACCATAGAAAAGGGACTT
TAAAGAGGGGGCGGATGACGTGCATCCTCTGGCCGGTTGCTGATGAAATATGCATTGCTATCGATCCTTTTCAGAATTTT
GTAATCCCATTGCGCAACACTGCCCTTTCTCACAAGGGATATTGCCATGGATGA

Upstream 100 bases:

>100_bases
CGGCAAGATTCTCGCGACAAGGATGACGCTTGTGCCCTGAACGACTTCCTACCGCAAATGACTCCGTCGTTGCCGGGGAG
CGACGATCTGCTAAGCGTCG

Downstream 100 bases:

>100_bases
CAAGGTGAAAATCCGCTGCCCAGCCTGCACTCATATTTTCAGGGAGAATGCCAGCCGCGTCCGCGATGGAGCACAGGTTA
ATTGCCTCAACTGCAACAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MAALPACKGVWLVRQFPKLRPVDLDEEFDAAGAEAAHLATIEFGDEHADGGVQLCQVKEALIAQTRQDPALGNLHGDFDF
GLMRRKVSLDIPKDDGTILEVPNRPACALDGRFWWSVRVVVRMMRTRDHRKGTLKRGRMTCILWPVADEICIAIDPFQNF
VIPLRNTALSHKGYCHG

Sequences:

>Translated_177_residues
MAALPACKGVWLVRQFPKLRPVDLDEEFDAAGAEAAHLATIEFGDEHADGGVQLCQVKEALIAQTRQDPALGNLHGDFDF
GLMRRKVSLDIPKDDGTILEVPNRPACALDGRFWWSVRVVVRMMRTRDHRKGTLKRGRMTCILWPVADEICIAIDPFQNF
VIPLRNTALSHKGYCHG
>Mature_176_residues
AALPACKGVWLVRQFPKLRPVDLDEEFDAAGAEAAHLATIEFGDEHADGGVQLCQVKEALIAQTRQDPALGNLHGDFDFG
LMRRKVSLDIPKDDGTILEVPNRPACALDGRFWWSVRVVVRMMRTRDHRKGTLKRGRMTCILWPVADEICIAIDPFQNFV
IPLRNTALSHKGYCHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19803; Mature: 19672

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALPACKGVWLVRQFPKLRPVDLDEEFDAAGAEAAHLATIEFGDEHADGGVQLCQVKEA
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
LIAQTRQDPALGNLHGDFDFGLMRRKVSLDIPKDDGTILEVPNRPACALDGRFWWSVRVV
HHHHCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCCEEECCCCCCEEECCCHHHHHHHH
VRMMRTRDHRKGTLKRGRMTCILWPVADEICIAIDPFQNFVIPLRNTALSHKGYCHG
HHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEECCCCEECCCCCCCC
>Mature Secondary Structure 
AALPACKGVWLVRQFPKLRPVDLDEEFDAAGAEAAHLATIEFGDEHADGGVQLCQVKEA
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
LIAQTRQDPALGNLHGDFDFGLMRRKVSLDIPKDDGTILEVPNRPACALDGRFWWSVRVV
HHHHCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCCEEECCCCCCEEECCCHHHHHHHH
VRMMRTRDHRKGTLKRGRMTCILWPVADEICIAIDPFQNFVIPLRNTALSHKGYCHG
HHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEECCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA