| Definition | Nitrobacter hamburgensis X14 plasmid 3, complete sequence. |
|---|---|
| Accession | NC_007961 |
| Length | 121,408 |
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The map label for this gene is 92109709
Identifier: 92109709
GI number: 92109709
Start: 46083
End: 46616
Strand: Reverse
Name: 92109709
Synonym: Nham_4593
Alternate gene names: NA
Gene position: 46616-46083 (Counterclockwise)
Preceding gene: 92109710
Following gene: 92109708
Centisome position: 38.4
GC content: 56.18
Gene sequence:
>534_bases TTGGCAGCGCTTCCAGCGTGCAAAGGCGTATGGCTGGTCCGGCAGTTTCCCAAGCTTCGGCCTGTCGATCTCGACGAAGA GTTCGACGCGGCTGGAGCCGAAGCCGCGCATCTGGCGACCATTGAGTTCGGCGACGAGCACGCGGATGGCGGCGTTCAGC TCTGCCAGGTAAAAGAAGCGCTGATTGCGCAGACGCGCCAGGACCCAGCGCTGGGCAATTTGCACGGCGACTTCGACTTT GGCCTTATGCGGCGCAAAGTATCTTTGGACATACCGAAAGATGACGGAACAATACTCGAGGTTCCGAATAGGCCCGCCTG CGCCCTCGATGGGCGTTTTTGGTGGAGCGTGCGGGTGGTTGTTCGGATGATGCGAACTCGAGACCATAGAAAAGGGACTT TAAAGAGGGGGCGGATGACGTGCATCCTCTGGCCGGTTGCTGATGAAATATGCATTGCTATCGATCCTTTTCAGAATTTT GTAATCCCATTGCGCAACACTGCCCTTTCTCACAAGGGATATTGCCATGGATGA
Upstream 100 bases:
>100_bases CGGCAAGATTCTCGCGACAAGGATGACGCTTGTGCCCTGAACGACTTCCTACCGCAAATGACTCCGTCGTTGCCGGGGAG CGACGATCTGCTAAGCGTCG
Downstream 100 bases:
>100_bases CAAGGTGAAAATCCGCTGCCCAGCCTGCACTCATATTTTCAGGGAGAATGCCAGCCGCGTCCGCGATGGAGCACAGGTTA ATTGCCTCAACTGCAACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MAALPACKGVWLVRQFPKLRPVDLDEEFDAAGAEAAHLATIEFGDEHADGGVQLCQVKEALIAQTRQDPALGNLHGDFDF GLMRRKVSLDIPKDDGTILEVPNRPACALDGRFWWSVRVVVRMMRTRDHRKGTLKRGRMTCILWPVADEICIAIDPFQNF VIPLRNTALSHKGYCHG
Sequences:
>Translated_177_residues MAALPACKGVWLVRQFPKLRPVDLDEEFDAAGAEAAHLATIEFGDEHADGGVQLCQVKEALIAQTRQDPALGNLHGDFDF GLMRRKVSLDIPKDDGTILEVPNRPACALDGRFWWSVRVVVRMMRTRDHRKGTLKRGRMTCILWPVADEICIAIDPFQNF VIPLRNTALSHKGYCHG >Mature_176_residues AALPACKGVWLVRQFPKLRPVDLDEEFDAAGAEAAHLATIEFGDEHADGGVQLCQVKEALIAQTRQDPALGNLHGDFDFG LMRRKVSLDIPKDDGTILEVPNRPACALDGRFWWSVRVVVRMMRTRDHRKGTLKRGRMTCILWPVADEICIAIDPFQNFV IPLRNTALSHKGYCHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19803; Mature: 19672
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALPACKGVWLVRQFPKLRPVDLDEEFDAAGAEAAHLATIEFGDEHADGGVQLCQVKEA CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH LIAQTRQDPALGNLHGDFDFGLMRRKVSLDIPKDDGTILEVPNRPACALDGRFWWSVRVV HHHHCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCCEEECCCCCCEEECCCHHHHHHHH VRMMRTRDHRKGTLKRGRMTCILWPVADEICIAIDPFQNFVIPLRNTALSHKGYCHG HHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEECCCCEECCCCCCCC >Mature Secondary Structure AALPACKGVWLVRQFPKLRPVDLDEEFDAAGAEAAHLATIEFGDEHADGGVQLCQVKEA CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH LIAQTRQDPALGNLHGDFDFGLMRRKVSLDIPKDDGTILEVPNRPACALDGRFWWSVRVV HHHHCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCCEEECCCCCCEEECCCHHHHHHHH VRMMRTRDHRKGTLKRGRMTCILWPVADEICIAIDPFQNFVIPLRNTALSHKGYCHG HHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEECCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA