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The map label for this gene is hspB [H]

Identifier: 92109672

GI number: 92109672

Start: 10019

End: 10480

Strand: Reverse

Name: hspB [H]

Synonym: Nham_4551

Alternate gene names: 92109672

Gene position: 10480-10019 (Counterclockwise)

Preceding gene: 92109673

Following gene: 92109671

Centisome position: 8.63

GC content: 61.47

Gene sequence:

>462_bases
ATGAGAACAACCTACGATTTTGCCCCCCTTTGGCGGTCGACCATCGGTTTTGACCGCCTGTTCGACCTCGTGGACGCAGC
GCAACAGGCCGGCGCGGAGGACAACTATCCACCATGCAACGTCGAGCGCCTAGGCGAAGACCGCTACCAGATCTCGCTCG
CGGTGGCGGGCTTCTCGGCCGATGAAATCGCAATTACCGCAGAACAAAGCGTGCTGACGGTCGAGGGCCGGAAGTCGGAA
AAGTACCAGCGCGAGTTCCTGTACCAGGGCATCTCGTCGCGGCCATTCAAGCGGCAGTTCAATCTGGCGGATTATGTCCA
GGTCAAGGGAGCCGCGTTCGACAACGGCTTGCTCCAGATCGAACTGGTGCGCGAGGTCCCCGAGGCCATGAAGCCGCGCC
GAATTTCGATCGACGGCTCGTCCGCTCCGAACGTCCGGCAGATCGACGACAAGGCGGCCTGA

Upstream 100 bases:

>100_bases
GCGATAAGCGGTCCGGGCGCCTTCTGGGGCTCGGCGAAGACGGGTTCCGGAGGTGTCCGGTGCCTACTCGTACCCATCTT
GCTCAACGGAGGATTTGGCT

Downstream 100 bases:

>100_bases
CCGCGAAGCAACGCTCGCATCGGCAAAGAACAGATTTCCGCAGCGGTTCGCGGCGGAAGTCGCTTGAATCGAGGAGAATA
ACGCTATGGGTATCAAAGAT

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MRTTYDFAPLWRSTIGFDRLFDLVDAAQQAGAEDNYPPCNVERLGEDRYQISLAVAGFSADEIAITAEQSVLTVEGRKSE
KYQREFLYQGISSRPFKRQFNLADYVQVKGAAFDNGLLQIELVREVPEAMKPRRISIDGSSAPNVRQIDDKAA

Sequences:

>Translated_153_residues
MRTTYDFAPLWRSTIGFDRLFDLVDAAQQAGAEDNYPPCNVERLGEDRYQISLAVAGFSADEIAITAEQSVLTVEGRKSE
KYQREFLYQGISSRPFKRQFNLADYVQVKGAAFDNGLLQIELVREVPEAMKPRRISIDGSSAPNVRQIDDKAA
>Mature_153_residues
MRTTYDFAPLWRSTIGFDRLFDLVDAAQQAGAEDNYPPCNVERLGEDRYQISLAVAGFSADEIAITAEQSVLTVEGRKSE
KYQREFLYQGISSRPFKRQFNLADYVQVKGAAFDNGLLQIELVREVPEAMKPRRISIDGSSAPNVRQIDDKAA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=136, Percent_Identity=48.5294117647059, Blast_Score=136, Evalue=6e-34,
Organism=Escherichia coli, GI87082316, Length=142, Percent_Identity=39.4366197183099, Blast_Score=113, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17211; Mature: 17211

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTYDFAPLWRSTIGFDRLFDLVDAAQQAGAEDNYPPCNVERLGEDRYQISLAVAGFSA
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEEEEECCCC
DEIAITAEQSVLTVEGRKSEKYQREFLYQGISSRPFKRQFNLADYVQVKGAAFDNGLLQI
CCEEEEECCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHCCCHHHEEECCCCCCCCCEEE
ELVREVPEAMKPRRISIDGSSAPNVRQIDDKAA
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTTYDFAPLWRSTIGFDRLFDLVDAAQQAGAEDNYPPCNVERLGEDRYQISLAVAGFSA
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEEEEECCCC
DEIAITAEQSVLTVEGRKSEKYQREFLYQGISSRPFKRQFNLADYVQVKGAAFDNGLLQI
CCEEEEECCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHCCCHHHEEECCCCCCCCCEEE
ELVREVPEAMKPRRISIDGSSAPNVRQIDDKAA
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8808920; 12597275 [H]