| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790487
Identifier: 91790487
GI number: 91790487
Start: 4948783
End: 4949652
Strand: Reverse
Name: 91790487
Synonym: Bpro_4658
Alternate gene names: NA
Gene position: 4949652-4948783 (Counterclockwise)
Preceding gene: 91790490
Following gene: 91790486
Centisome position: 95.18
GC content: 59.31
Gene sequence:
>870_bases ATGCTTTACCCTGAACTGTTCAAACAACTCGAATCCGTCCGCTGGGACATGGACAAAGACATTCCCTGGGCCAGCTTCGA CGCCTCCAAACTGTCCGATGAGCAGGCCCAGACCATCAAGATGAATGCCATCACCGAATGGGCGGCCTTGCCCGCCACGG AGATGTTCCTGCGGGACAACAAGGACGACAGTGATTTTTCCGCTTTCATGTCGATCTGGTTCTTTGAGGAGCAAAAGCAC TCGCTGGTGCTGATGGAATACCTGAAGCGATTTCGGCCCGACCTGGCCCCCACCGAAGAGGAGCTGCATGAGGTGCGTTT CGAGTTCGAGCCGGCGCCCGCGCTGGAAACCCTGATGCTGCATTTTTGCGGCGAGATTCGCCTGAACCACTGGTACCGCC GGGCCAGCGAGTGGCACACCGAGCCGGTCATCAAGCAGATTTACACCCAGCTCAGCCAGGATGAAGCGCGCCATGGCGGC GCTTACCTGCGCTACATGAAACGCGCTATCAACAATTTCGGCAACGAAGCCAAGGCAGCCTTTACCAAGGTAGGCGTGCT GATGGCCAGTGCCCGCCGGACGGCGCAGGCCCTGCACCCGACCAACCTGCATGTCAACAAAAGCCTGTTTCCGCGCGACA CCATCCAGAGCCGCCTGCCCAACCCCGAATGGCTGGAGCACTGGCTCGACACACAGATCAAGTTTGACGCGGTGTGGGAG GGCAAGGTGGTCGAGCGCATCCTGCACAACCTGAGCCTGCTGATGAACCAGAGCTTCAAGAGCGTCCAGGAGCTGAACCG CTACCGCAAGGAAATCGGCAAGGAACTGGCTGCCGTCATCACGCCGGACGGCAAGCCGCAACCAGTGTGA
Upstream 100 bases:
>100_bases GTCACTACTTGTCACATTCGCCGCCTAAAATCGCGGGATACCGGATGCAAGAGACATCCAGGGCAGATTTGTCTGCGTAT TCGCTGGCCAAGGAGTTCAC
Downstream 100 bases:
>100_bases GCCAGCCTGCCTTTCTGGACAAAATCGTTTCGCGCCAGGATGCCGCGGCCCGGGTGGCCATGCTGCCCCGGCCGGTCGTG TTCACCAATGGCGTGTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase Component Of ABC Transporter
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MLYPELFKQLESVRWDMDKDIPWASFDASKLSDEQAQTIKMNAITEWAALPATEMFLRDNKDDSDFSAFMSIWFFEEQKH SLVLMEYLKRFRPDLAPTEEELHEVRFEFEPAPALETLMLHFCGEIRLNHWYRRASEWHTEPVIKQIYTQLSQDEARHGG AYLRYMKRAINNFGNEAKAAFTKVGVLMASARRTAQALHPTNLHVNKSLFPRDTIQSRLPNPEWLEHWLDTQIKFDAVWE GKVVERILHNLSLLMNQSFKSVQELNRYRKEIGKELAAVITPDGKPQPV
Sequences:
>Translated_289_residues MLYPELFKQLESVRWDMDKDIPWASFDASKLSDEQAQTIKMNAITEWAALPATEMFLRDNKDDSDFSAFMSIWFFEEQKH SLVLMEYLKRFRPDLAPTEEELHEVRFEFEPAPALETLMLHFCGEIRLNHWYRRASEWHTEPVIKQIYTQLSQDEARHGG AYLRYMKRAINNFGNEAKAAFTKVGVLMASARRTAQALHPTNLHVNKSLFPRDTIQSRLPNPEWLEHWLDTQIKFDAVWE GKVVERILHNLSLLMNQSFKSVQELNRYRKEIGKELAAVITPDGKPQPV >Mature_289_residues MLYPELFKQLESVRWDMDKDIPWASFDASKLSDEQAQTIKMNAITEWAALPATEMFLRDNKDDSDFSAFMSIWFFEEQKH SLVLMEYLKRFRPDLAPTEEELHEVRFEFEPAPALETLMLHFCGEIRLNHWYRRASEWHTEPVIKQIYTQLSQDEARHGG AYLRYMKRAINNFGNEAKAAFTKVGVLMASARRTAQALHPTNLHVNKSLFPRDTIQSRLPNPEWLEHWLDTQIKFDAVWE GKVVERILHNLSLLMNQSFKSVQELNRYRKEIGKELAAVITPDGKPQPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33896; Mature: 33896
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYPELFKQLESVRWDMDKDIPWASFDASKLSDEQAQTIKMNAITEWAALPATEMFLRDN CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCC KDDSDFSAFMSIWFFEEQKHSLVLMEYLKRFRPDLAPTEEELHEVRFEFEPAPALETLML CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHH HFCGEIRLNHWYRRASEWHTEPVIKQIYTQLSQDEARHGGAYLRYMKRAINNFGNEAKAA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FTKVGVLMASARRTAQALHPTNLHVNKSLFPRDTIQSRLPNPEWLEHWLDTQIKFDAVWE HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHCCCEEEEEEEC GKVVERILHNLSLLMNQSFKSVQELNRYRKEIGKELAAVITPDGKPQPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLYPELFKQLESVRWDMDKDIPWASFDASKLSDEQAQTIKMNAITEWAALPATEMFLRDN CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCC KDDSDFSAFMSIWFFEEQKHSLVLMEYLKRFRPDLAPTEEELHEVRFEFEPAPALETLML CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHH HFCGEIRLNHWYRRASEWHTEPVIKQIYTQLSQDEARHGGAYLRYMKRAINNFGNEAKAA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FTKVGVLMASARRTAQALHPTNLHVNKSLFPRDTIQSRLPNPEWLEHWLDTQIKFDAVWE HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHCCCEEEEEEEC GKVVERILHNLSLLMNQSFKSVQELNRYRKEIGKELAAVITPDGKPQPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA