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The map label for this gene is ydjA [C]

Identifier: 91790416

GI number: 91790416

Start: 4858113

End: 4858799

Strand: Reverse

Name: ydjA [C]

Synonym: Bpro_4587

Alternate gene names: 91790416

Gene position: 4858799-4858113 (Counterclockwise)

Preceding gene: 91790417

Following gene: 91790414

Centisome position: 93.43

GC content: 67.25

Gene sequence:

>687_bases
ATGAGCCTGCGTGCTGTCCCTGTCCCGCTCCCGCTTGTTGCGTCCGCACTGGCGGACAACGATGCGGCGGCCTTTGCGGC
GGCGCTGATGCAATCGCGCCAAACCATTTTGCCCAAACGCCTGGTGGCGCCCGGCCCCGATGCGAAACAGCTCGGCATGA
TCCTCAATGCCGCGGCCACCGCCCCCGACCACGGGCAGCTGCTGCCTTGGCGCTTTGTGCTTGTACCCCATGCTGCGCGC
GACCGGCTCGCCGAGGTGTTTGGTGCCGCGCTGATGGCGCGTGACGCACAGGCCACCCCCGAACAGGTCGGCCAGGCGCG
CGAAAAGGCGCATCGCGCCCCTCTGCTGATGCTGGTGGTGGTTGATGGCCGGCGCGGCGATGCAGCGGTTGACCTGTCCG
AACGCATCGTTTCTGCCGGCTGTGCGGTGCAGAACATGCTGCTCATGGCCACGGCGCTGGGTTATGGTTCGGCGCTGACG
AGCGGCAAGGCCCTGAAGTCCAGTGGACTGCGTGCGCTGTTTGGCCTGGCAGACGGCGAACAGGCGCTGTGTTTTGTCAG
CATCGGCACCGCGCAGTCGCGCAAACCCGCCCGCTTGCGCCCGGTGCCCGGCAATTTTGTGACCTGCCTTGCTGCCGAGG
GGGCTGCGCCGGGTCGCGACCCGGCGGACTCTTTTTATTCCCTGTGA

Upstream 100 bases:

>100_bases
CATCTGGGCGTTTGCGGATGAGCGGCCAGGCGAAGGTTGACTGTCGCTGGCGCGTTGGCCGCCTGCGTGCCGATGGATGC
TCCGACGGAGGTGAGCCCTG

Downstream 100 bases:

>100_bases
CTGGAACTACCCATGGACATCCTGAGTTTTGACGACCTGCTGCAGGCGGCCCGGGCCCAGCCCGAGCCGCAGCGCCTGCT
GTTTGTGTTTGCCGGTGTGG

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSLRAVPVPLPLVASALADNDAAAFAAALMQSRQTILPKRLVAPGPDAKQLGMILNAAATAPDHGQLLPWRFVLVPHAAR
DRLAEVFGAALMARDAQATPEQVGQAREKAHRAPLLMLVVVDGRRGDAAVDLSERIVSAGCAVQNMLLMATALGYGSALT
SGKALKSSGLRALFGLADGEQALCFVSIGTAQSRKPARLRPVPGNFVTCLAAEGAAPGRDPADSFYSL

Sequences:

>Translated_228_residues
MSLRAVPVPLPLVASALADNDAAAFAAALMQSRQTILPKRLVAPGPDAKQLGMILNAAATAPDHGQLLPWRFVLVPHAAR
DRLAEVFGAALMARDAQATPEQVGQAREKAHRAPLLMLVVVDGRRGDAAVDLSERIVSAGCAVQNMLLMATALGYGSALT
SGKALKSSGLRALFGLADGEQALCFVSIGTAQSRKPARLRPVPGNFVTCLAAEGAAPGRDPADSFYSL
>Mature_227_residues
SLRAVPVPLPLVASALADNDAAAFAAALMQSRQTILPKRLVAPGPDAKQLGMILNAAATAPDHGQLLPWRFVLVPHAARD
RLAEVFGAALMARDAQATPEQVGQAREKAHRAPLLMLVVVDGRRGDAAVDLSERIVSAGCAVQNMLLMATALGYGSALTS
GKALKSSGLRALFGLADGEQALCFVSIGTAQSRKPARLRPVPGNFVTCLAAEGAAPGRDPADSFYSL

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=172, Percent_Identity=33.1395348837209, Blast_Score=88, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 23670; Mature: 23539

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRAVPVPLPLVASALADNDAAAFAAALMQSRQTILPKRLVAPGPDAKQLGMILNAAAT
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCC
APDHGQLLPWRFVLVPHAARDRLAEVFGAALMARDAQATPEQVGQAREKAHRAPLLMLVV
CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEE
VDGRRGDAAVDLSERIVSAGCAVQNMLLMATALGYGSALTSGKALKSSGLRALFGLADGE
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCEEEEECCCCC
QALCFVSIGTAQSRKPARLRPVPGNFVTCLAAEGAAPGRDPADSFYSL
CEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCC
>Mature Secondary Structure 
SLRAVPVPLPLVASALADNDAAAFAAALMQSRQTILPKRLVAPGPDAKQLGMILNAAAT
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCC
APDHGQLLPWRFVLVPHAARDRLAEVFGAALMARDAQATPEQVGQAREKAHRAPLLMLVV
CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEE
VDGRRGDAAVDLSERIVSAGCAVQNMLLMATALGYGSALTSGKALKSSGLRALFGLADGE
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCEEEEECCCCC
QALCFVSIGTAQSRKPARLRPVPGNFVTCLAAEGAAPGRDPADSFYSL
CEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]