| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91790261
Identifier: 91790261
GI number: 91790261
Start: 4673434
End: 4673973
Strand: Reverse
Name: 91790261
Synonym: Bpro_4428
Alternate gene names: NA
Gene position: 4673973-4673434 (Counterclockwise)
Preceding gene: 91790262
Following gene: 91790260
Centisome position: 89.88
GC content: 58.33
Gene sequence:
>540_bases GTGGATCCACGACCTCTTATTGCCCTTGACGGTGACGGAGTCCTGCTGGACTACAACCTGGCCTACGCCAAGGCCTGGGA GAGAGCGACTGGCAGGTATCCCGCGGAACGAGACATCCAGGCTTACTGGGCAATGGATCGATGGGATGTCGAAAAGCTTA GCGGAGAAAAGCTGGAGCAGTTCCGGGCTTGCTTCGATGTCGATTTCTGGAGCACGATTCCGCCACTGGCCTCTGCTGTC GAAGCCTGCCATCGCTTACGCAATCAGGGTTACGACCTGGTCTGCGTGACGGCGTTAGCAGAAGATCTTGCGGATGCTCG GCTCCGGAATTTGCGCCAGCACGACTTCCCTATTGAGAGGGTGTTTGCTACCGCGCATTCCCTGGGAGGGCGCAGTCCGA AAGCCGACGTGCTGGATCGGCTGAAGCCGGTAGCCTTTGTAGATGACTATCTCCCCTACCTGGTGGGTGTGGATGGAGGC ATTCACAAGGCGCTGGTTCTCCGGGGCCCAAGGGTAGTCCGAACATCGGACAGCACTTAA
Upstream 100 bases:
>100_bases CCTCAACCTCCAGATGGTGATCGAAAGGCACGACGTCAAAGATGGGCTCTTTCCTGGCATTGAAGTGCCCGCGAAGTTTT CGGTCTAAGGGGTTTTAGCT
Downstream 100 bases:
>100_bases GTGCTGTCGACTCCATGCATGCCGATCTATCGGATTTCGTCCAGTGGTGGCTAAGCAGGCATTAAACGGGCGTGCACGCA GTCGTTTGTTATTTCACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MDPRPLIALDGDGVLLDYNLAYAKAWERATGRYPAERDIQAYWAMDRWDVEKLSGEKLEQFRACFDVDFWSTIPPLASAV EACHRLRNQGYDLVCVTALAEDLADARLRNLRQHDFPIERVFATAHSLGGRSPKADVLDRLKPVAFVDDYLPYLVGVDGG IHKALVLRGPRVVRTSDST
Sequences:
>Translated_179_residues MDPRPLIALDGDGVLLDYNLAYAKAWERATGRYPAERDIQAYWAMDRWDVEKLSGEKLEQFRACFDVDFWSTIPPLASAV EACHRLRNQGYDLVCVTALAEDLADARLRNLRQHDFPIERVFATAHSLGGRSPKADVLDRLKPVAFVDDYLPYLVGVDGG IHKALVLRGPRVVRTSDST >Mature_179_residues MDPRPLIALDGDGVLLDYNLAYAKAWERATGRYPAERDIQAYWAMDRWDVEKLSGEKLEQFRACFDVDFWSTIPPLASAV EACHRLRNQGYDLVCVTALAEDLADARLRNLRQHDFPIERVFATAHSLGGRSPKADVLDRLKPVAFVDDYLPYLVGVDGG IHKALVLRGPRVVRTSDST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20144; Mature: 20144
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPRPLIALDGDGVLLDYNLAYAKAWERATGRYPAERDIQAYWAMDRWDVEKLSGEKLEQ CCCCCEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHCHHHHHH FRACFDVDFWSTIPPLASAVEACHRLRNQGYDLVCVTALAEDLADARLRNLRQHDFPIER HHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHH VFATAHSLGGRSPKADVLDRLKPVAFVDDYLPYLVGVDGGIHKALVLRGPRVVRTSDST HHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHEECCCEEEECCCCC >Mature Secondary Structure MDPRPLIALDGDGVLLDYNLAYAKAWERATGRYPAERDIQAYWAMDRWDVEKLSGEKLEQ CCCCCEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHCHHHHHH FRACFDVDFWSTIPPLASAVEACHRLRNQGYDLVCVTALAEDLADARLRNLRQHDFPIER HHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHH VFATAHSLGGRSPKADVLDRLKPVAFVDDYLPYLVGVDGGIHKALVLRGPRVVRTSDST HHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHEECCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA