Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790257

Identifier: 91790257

GI number: 91790257

Start: 4670813

End: 4671124

Strand: Direct

Name: 91790257

Synonym: Bpro_4424

Alternate gene names: NA

Gene position: 4670813-4671124 (Clockwise)

Preceding gene: 91790256

Following gene: 91790258

Centisome position: 89.82

GC content: 66.67

Gene sequence:

>312_bases
ATGTTCAAACCAATTGATCTTCCCGCTGCAGAGCAGCAAAAAGCCGTGCTCATCCGCGTGGAGGGCCGCGAGGTCCATGC
CCGCGAAGGCCAGACCCTGGCCATGGCCCTGCTGGGCGCAGGGGTCGTCCCATTTCGCCGCACGGCCGTGTCCGGTGCGC
CGCGCGCGCCGCTGTGCCTGATGGGTGTGTGTTTCGATTGCCTGGTCGAAGTGGATGGCTCGCAGAATGTGCAGTCTTGC
CTCGTCGAGGTGCGCGAAGGCATGCAGGTGCGGCTTCCCTCCGGCGCGCGGCGCGCAGGGGGTGCAGCATGA

Upstream 100 bases:

>100_bases
GGGATCACGCTCGCGCCCGCCCATGCCGGCCCTTTGGTGGATTGGATGCGAACCGGCACCGAACCGGCGGAAATCCGGGG
TTTCAAAGCGGAGCGTTTCG

Downstream 100 bases:

>100_bases
ATGGCCCCCACGAGCTGAGCGAGGTGGACGACGCCAACGCGGGAGCAGATTTCACCCATGACCTCGTCATCATCGGCTCC
GGCCCGGCCGGCATGTCCGC

Product: putative sarcosine oxidase subunit alpha

Products: NA

Alternate protein names: Sarcosine Oxidase Subunit Alpha; Proline Dehydrogenase Alpha Subunit; SoxA Protein; Proline Dehydrogenase; NAD(FAD)-Dependent Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; FAD Dependent Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MFKPIDLPAAEQQKAVLIRVEGREVHAREGQTLAMALLGAGVVPFRRTAVSGAPRAPLCLMGVCFDCLVEVDGSQNVQSC
LVEVREGMQVRLPSGARRAGGAA

Sequences:

>Translated_103_residues
MFKPIDLPAAEQQKAVLIRVEGREVHAREGQTLAMALLGAGVVPFRRTAVSGAPRAPLCLMGVCFDCLVEVDGSQNVQSC
LVEVREGMQVRLPSGARRAGGAA
>Mature_103_residues
MFKPIDLPAAEQQKAVLIRVEGREVHAREGQTLAMALLGAGVVPFRRTAVSGAPRAPLCLMGVCFDCLVEVDGSQNVQSC
LVEVREGMQVRLPSGARRAGGAA

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10887; Mature: 10887

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPIDLPAAEQQKAVLIRVEGREVHAREGQTLAMALLGAGVVPFRRTAVSGAPRAPLCL
CCCCCCCCCCCCCCEEEEEECCCEEECCCCCCHHHHHHHCCCCCHHHHHCCCCCCCCHHH
MGVCFDCLVEVDGSQNVQSCLVEVREGMQVRLPSGARRAGGAA
HHHHHHHHEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MFKPIDLPAAEQQKAVLIRVEGREVHAREGQTLAMALLGAGVVPFRRTAVSGAPRAPLCL
CCCCCCCCCCCCCCEEEEEECCCEEECCCCCCHHHHHHHCCCCCHHHHHCCCCCCCCHHH
MGVCFDCLVEVDGSQNVQSCLVEVREGMQVRLPSGARRAGGAA
HHHHHHHHEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA