Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790232

Identifier: 91790232

GI number: 91790232

Start: 4642953

End: 4643252

Strand: Reverse

Name: 91790232

Synonym: Bpro_4399

Alternate gene names: NA

Gene position: 4643252-4642953 (Counterclockwise)

Preceding gene: 91790233

Following gene: 91790231

Centisome position: 89.29

GC content: 63.67

Gene sequence:

>300_bases
ATGCTACTTCCCGCAAACGAGCAGCGGCCCGTGGTCGATATATTTGTCGAAGGGCGGCGCATATCGGCCCGCGAGGGCGA
GACGATTGCAGCCGCACTACTTAACGCGGGCATTGTCCCATTCCGGCGAACGCCCGTATCGGGTCAGCCGCGCGCGCCGT
TGTGCCTCATGGGGGTGTGCTTCGAATGCCTGGTCGAAGTAGATGGTGCGCAGAACGTGCAATCCTGCATGGTCAGGGTG
AATGCCGGCATGCAGGTGGGGTTGCCCACCGGCGCGCGCCGCGCGGGAGATGGGAAATGA

Upstream 100 bases:

>100_bases
GCGTCTATGCATGCGGGTTCACTCGTGAACTGGATGAGAGGTGGCGTTGAGCCTTCCGAAATCAGGACCTTCAAAGCGGA
GCGCTTCGATGTTTAGGACG

Downstream 100 bases:

>100_bases
GCGCGTCGACACACGACCTCGTGATCATCGGTGCTGGTCCAGCTGGCATGTCGGCCGCGCTAACGGCGGCATCGCTCGGA
ATGAAGACACTGCTGCTGGA

Product: putative sarcosine oxidase subunit alpha

Products: NA

Alternate protein names: Proline Dehydrogenase Alpha Subunit; Sarcosine Oxidase Subunit Alpha; SoxA Protein; NAD(FAD)-Dependent Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MLLPANEQRPVVDIFVEGRRISAREGETIAAALLNAGIVPFRRTPVSGQPRAPLCLMGVCFECLVEVDGAQNVQSCMVRV
NAGMQVGLPTGARRAGDGK

Sequences:

>Translated_99_residues
MLLPANEQRPVVDIFVEGRRISAREGETIAAALLNAGIVPFRRTPVSGQPRAPLCLMGVCFECLVEVDGAQNVQSCMVRV
NAGMQVGLPTGARRAGDGK
>Mature_99_residues
MLLPANEQRPVVDIFVEGRRISAREGETIAAALLNAGIVPFRRTPVSGQPRAPLCLMGVCFECLVEVDGAQNVQSCMVRV
NAGMQVGLPTGARRAGDGK

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10505; Mature: 10505

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLPANEQRPVVDIFVEGRRISAREGETIAAALLNAGIVPFRRTPVSGQPRAPLCLMGVC
CCCCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
FECLVEVDGAQNVQSCMVRVNAGMQVGLPTGARRAGDGK
HHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLLPANEQRPVVDIFVEGRRISAREGETIAAALLNAGIVPFRRTPVSGQPRAPLCLMGVC
CCCCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
FECLVEVDGAQNVQSCMVRVNAGMQVGLPTGARRAGDGK
HHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA