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The map label for this gene is potD [C]

Identifier: 91790215

GI number: 91790215

Start: 4621821

End: 4622864

Strand: Reverse

Name: potD [C]

Synonym: Bpro_4380

Alternate gene names: 91790215

Gene position: 4622864-4621821 (Counterclockwise)

Preceding gene: 91790217

Following gene: 91790214

Centisome position: 88.9

GC content: 62.26

Gene sequence:

>1044_bases
ATGAAAGCAAAATTCCTGAGAGCATCGCTTGCCACGGCCGTCGCCCTGGCTTGTGCGGGCATCGTCCACGCGCAATCCGT
CCCTACCCTCTACGTCGGCGCCTACGGCGGCTCCACCGAAAAGGCGTTCAAGGAAAAAATCATCCCGGCCTTTGAGGCGG
CCCGCAAGGTCAAGATCGTCTATGTCGCGGGCAACTCCACCGACACCCTGGCCAAGCTGCAGGCGCAGAAAGACAAGCAG
GAGCTTGACCTCGTGCTGTTGGATGACGGCCCAATGCAGCAGGCCGTGCAGTTCGGTTTCTGCGACAAGGTCAAGGATGC
GCCTATCTACAAGGATATCTACCCCTTGGCCCGCATCGACGACCGCTCCATGGCTATCGGCGCCGTCGCCACGGGCCTGG
CCTACAACACCGAAGCCTTCAAGAAGGCCGGCTTGCCCAAGCCCGATTCATGGCAAATCCTCACGGACAAGAAGTTCAAG
CAGAAGCTGGCCATCCCGCCGATCTCCAACACCTACGGCCTGCAGACGCTGATCATGTACGCCAGGATGCGCGGCGGCGG
CGAAAAGGCCATCGACGCCGGCTTCGACGCCATGGCCAAGGAAGTCGCGCCCAACGTGCTGGCCTGGGAGCCATCGCCTG
GCAAGATGACCGAGCTTTTCCAGAACGGCGACATCAACCTCGCGGTGTGGGGCAGCGGGCGCACCGAGTCCTTCAGGGCC
ACCGGTTTCCCCATCGAATTCGTCTATCCCAAGGAAGGCGCGATGGCGCTGCTGATCGCGGCCTGCCCGGTTGTCAACAG
CGACGTGCCCGAGCAGGCCCAGGCCCTGCTGCAATACCTGATGACGCCTGAAGTGCAGGTCCTGCTGGCCGAGACCCAGG
GCTTTGGTCCTGTCAACAGCAAGGTCAAGCTTGACCCCGCCATCGCCGCCAAGGTCCCTTACGGCCCGGCGCAGATCGGC
AAGCTGCTGCCGACTAACTGGTCCGTCGTCAACGAGAAGCGCGGCGAGTGGACGAATCGCTGGAACCGCACGATTGAACG
TTAA

Upstream 100 bases:

>100_bases
GCGGGTTGTGCGGTCCATTATCGTCCCATAACCTGGTGTGTCAAATTAGTGCGTGATGCGCCCCAGAGTGGGCCGGATGC
ACCGTTATGGAGAAACCCCG

Downstream 100 bases:

>100_bases
GCCCTGACGTTTTTTGCCCCCGCGGCCCTTCGCCGCGGGATTGATGCCGTTCTTGCCTTCCTTGTCCGGCAGCCCATAGC
CACCAGAACACCATGACCTT

Product: extracellular solute-binding protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: Spermidine/Putrescine ABC Transporter; ABC Transporter

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MKAKFLRASLATAVALACAGIVHAQSVPTLYVGAYGGSTEKAFKEKIIPAFEAARKVKIVYVAGNSTDTLAKLQAQKDKQ
ELDLVLLDDGPMQQAVQFGFCDKVKDAPIYKDIYPLARIDDRSMAIGAVATGLAYNTEAFKKAGLPKPDSWQILTDKKFK
QKLAIPPISNTYGLQTLIMYARMRGGGEKAIDAGFDAMAKEVAPNVLAWEPSPGKMTELFQNGDINLAVWGSGRTESFRA
TGFPIEFVYPKEGAMALLIAACPVVNSDVPEQAQALLQYLMTPEVQVLLAETQGFGPVNSKVKLDPAIAAKVPYGPAQIG
KLLPTNWSVVNEKRGEWTNRWNRTIER

Sequences:

>Translated_347_residues
MKAKFLRASLATAVALACAGIVHAQSVPTLYVGAYGGSTEKAFKEKIIPAFEAARKVKIVYVAGNSTDTLAKLQAQKDKQ
ELDLVLLDDGPMQQAVQFGFCDKVKDAPIYKDIYPLARIDDRSMAIGAVATGLAYNTEAFKKAGLPKPDSWQILTDKKFK
QKLAIPPISNTYGLQTLIMYARMRGGGEKAIDAGFDAMAKEVAPNVLAWEPSPGKMTELFQNGDINLAVWGSGRTESFRA
TGFPIEFVYPKEGAMALLIAACPVVNSDVPEQAQALLQYLMTPEVQVLLAETQGFGPVNSKVKLDPAIAAKVPYGPAQIG
KLLPTNWSVVNEKRGEWTNRWNRTIER
>Mature_347_residues
MKAKFLRASLATAVALACAGIVHAQSVPTLYVGAYGGSTEKAFKEKIIPAFEAARKVKIVYVAGNSTDTLAKLQAQKDKQ
ELDLVLLDDGPMQQAVQFGFCDKVKDAPIYKDIYPLARIDDRSMAIGAVATGLAYNTEAFKKAGLPKPDSWQILTDKKFK
QKLAIPPISNTYGLQTLIMYARMRGGGEKAIDAGFDAMAKEVAPNVLAWEPSPGKMTELFQNGDINLAVWGSGRTESFRA
TGFPIEFVYPKEGAMALLIAACPVVNSDVPEQAQALLQYLMTPEVQVLLAETQGFGPVNSKVKLDPAIAAKVPYGPAQIG
KLLPTNWSVVNEKRGEWTNRWNRTIER

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. Polyamine Binding Protein. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 460 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37755; Mature: 37755

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKFLRASLATAVALACAGIVHAQSVPTLYVGAYGGSTEKAFKEKIIPAFEAARKVKIV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHHHCCCEEEEE
YVAGNSTDTLAKLQAQKDKQELDLVLLDDGPMQQAVQFGFCDKVKDAPIYKDIYPLARID
EEECCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCHHHHCHHHCCC
DRSMAIGAVATGLAYNTEAFKKAGLPKPDSWQILTDKKFKQKLAIPPISNTYGLQTLIMY
CCCEEHHHHHHCCCCCHHHHHHCCCCCCCCEEEEECHHHHHHCCCCCCCCCHHHHHHHHH
ARMRGGGEKAIDAGFDAMAKEVAPNVLAWEPSPGKMTELFQNGDINLAVWGSGRTESFRA
HHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCCEEEEEECCCCCCCEEE
TGFPIEFVYPKEGAMALLIAACPVVNSDVPEQAQALLQYLMTPEVQVLLAETQGFGPVNS
CCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
KVKLDPAIAAKVPYGPAQIGKLLPTNWSVVNEKRGEWTNRWNRTIER
CEEECCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKAKFLRASLATAVALACAGIVHAQSVPTLYVGAYGGSTEKAFKEKIIPAFEAARKVKIV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHHHCCCEEEEE
YVAGNSTDTLAKLQAQKDKQELDLVLLDDGPMQQAVQFGFCDKVKDAPIYKDIYPLARID
EEECCCCHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCHHHHCHHHCCC
DRSMAIGAVATGLAYNTEAFKKAGLPKPDSWQILTDKKFKQKLAIPPISNTYGLQTLIMY
CCCEEHHHHHHCCCCCHHHHHHCCCCCCCCEEEEECHHHHHHCCCCCCCCCHHHHHHHHH
ARMRGGGEKAIDAGFDAMAKEVAPNVLAWEPSPGKMTELFQNGDINLAVWGSGRTESFRA
HHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCCEEEEEECCCCCCCEEE
TGFPIEFVYPKEGAMALLIAACPVVNSDVPEQAQALLQYLMTPEVQVLLAETQGFGPVNS
CCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
KVKLDPAIAAKVPYGPAQIGKLLPTNWSVVNEKRGEWTNRWNRTIER
CEEECCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA