| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790177
Identifier: 91790177
GI number: 91790177
Start: 4579510
End: 4579806
Strand: Reverse
Name: 91790177
Synonym: Bpro_4342
Alternate gene names: NA
Gene position: 4579806-4579510 (Counterclockwise)
Preceding gene: 91790178
Following gene: 91790176
Centisome position: 88.07
GC content: 62.63
Gene sequence:
>297_bases ATGTTCAAAAAGCTGCATGAGTCCGGCGCTTGCGCGCTGACTTTCTATATAGACGGCCACGCCGTCGCCGCTGAAAGCGG CGAAACCGTGGCCGCCGTGCTATTGCGCCAGCAGACGCCAGTCTGTCGGACCACACCCGTGCATGAAAGCCCGCGAGCAC CGTACTGCATGATGGGCGTGTGCTTCGATTGCCTGGCCATCATCGACGGCGTGGCGTCCACGCAGTCTTGTCTGGTCACG GTGCGCGAAGGCATGCGCGTGGAACGTCAGTTCGGCCGCCGGAGTGTGACGCCATGA
Upstream 100 bases:
>100_bases GGCGTGACGCTGGCCTCGTTCCACGCGGGCACCTATGCCCGTGCGCTGGCTGGCGGCTCGCTGCCCGACACCCTGAATGT TTTTCACCATGAGCGTTTCA
Downstream 100 bases:
>100_bases CGCGCGAATTCGATGTAGTAGTGATCGGAGCGGGGCCAGCTGGCATGAGCGCGGCTATCGGCCTCAGGGGTCAGGGACTC TCCGTGCTGGTAGTGGACGA
Product: putative sarcosine oxidase subunit alpha
Products: NA
Alternate protein names: SoxA Protein; Proline Dehydrogenase Alpha Subunit; Sarcosine Oxidase Subunit Alpha; NAD(FAD)-Dependent Dehydrogenase; Ferredoxin; Pyridine Nucleotide-Disulfide Oxidoreductase
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MFKKLHESGACALTFYIDGHAVAAESGETVAAVLLRQQTPVCRTTPVHESPRAPYCMMGVCFDCLAIIDGVASTQSCLVT VREGMRVERQFGRRSVTP
Sequences:
>Translated_98_residues MFKKLHESGACALTFYIDGHAVAAESGETVAAVLLRQQTPVCRTTPVHESPRAPYCMMGVCFDCLAIIDGVASTQSCLVT VREGMRVERQFGRRSVTP >Mature_98_residues MFKKLHESGACALTFYIDGHAVAAESGETVAAVLLRQQTPVCRTTPVHESPRAPYCMMGVCFDCLAIIDGVASTQSCLVT VREGMRVERQFGRRSVTP
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10662; Mature: 10662
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKLHESGACALTFYIDGHAVAAESGETVAAVLLRQQTPVCRTTPVHESPRAPYCMMGV CCCCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH CFDCLAIIDGVASTQSCLVTVREGMRVERQFGRRSVTP HHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHCCCCCCC >Mature Secondary Structure MFKKLHESGACALTFYIDGHAVAAESGETVAAVLLRQQTPVCRTTPVHESPRAPYCMMGV CCCCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH CFDCLAIIDGVASTQSCLVTVREGMRVERQFGRRSVTP HHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA