| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fixG [H]
Identifier: 91790139
GI number: 91790139
Start: 4534043
End: 4535473
Strand: Reverse
Name: fixG [H]
Synonym: Bpro_4301
Alternate gene names: 91790139
Gene position: 4535473-4534043 (Counterclockwise)
Preceding gene: 91790140
Following gene: 91790138
Centisome position: 87.22
GC content: 65.76
Gene sequence:
>1431_bases TTGCAATCTTCCACACGTCGCAAAGTCATACCCATCGTGCCCGAAGCGGCGCATGGGCAGACGGAGTCGCTGTACGAGGC GCAGAAGAAGGTCTATCCGCGCTCGGTCACGGGCCTGTTCGCTCGCTGGCGCGTGGCTTGCGTCATCCTGACCCAGCTGG TGTTCTACGGCCTGCCCTGGCTGGAGTGGGGCCAGCGGCAGGCGGTGCTGTTTGACCTGGGCGCGCGGCGCTTCTACATC TTCGGCTACGTCCTGTACCCGCAGGATTTCATCTACCTCACCGGGCTGCTGGTGGTCAGCGCACTCACGCTGTTCCTGTT CACCGCCGTCGCCGGACGCCTGTGGTGCGGCTTCGCCTGCCCCCAGACCGTGTACACCGAAATCTTCCTGTGGATAGAGC GCAAGGTCGAGGGCGACCGCACCCTGCGGATGCGGCTGGACGGCTCGCCGATGTCGCTGGAAAAACTGGTCAAGAAGTGG TTCAAGCACATCCTGTGGCTGGGGCTGGCGATGTGGACCGGTTTCACCTTCGTCGGTTATTTCGTGCCGGTCCGCGAGCT CGGAATGCAGTTCCTGCAAACCCGCATGAGCGGCTGGGAGGTGTTCTGGGTGTGCTTCTATGGCCTGGCCACTTACGGCA ATGCCGGATTCCTGCGCGAGCAGGTGTGCAAGTACATGTGTCCCTATGCGCGCTTTCAGAGCGCCATGTTCGACCGCGAC ACCCTGATCGTCAGCTATGACGGCGGCCGGGGTGAACCGCGCGGTGCGCGTTCCCGCACGGCCGACCTCGCCGCCCTGTC GCTGGGTGCCTGCGTGGACTGCACCCTGTGCGTGCAGGTCTGCCCGACCGGCATCGACATCCGCAACGGCCTGCAGTACG AGTGCATCGGTTGCGCCGCCTGCATCGACGCCTGCGATGGCGTGATGGACAAGATGAACTACCCGCGCGGCCTGATTCGC TTCACCACCCAGAACGCGCTGGCCCAACACTGGAACCGGCTGCAGATGTGGCGGCAGGTCCTGCGTCCGCGCGTGCTCGT CTACGGCGCCATCCTGCTGGCCCTGTGCGTGGGCCTGCTGTGGAGCCTGGTCGCCCGCATGCCGCTCAAGGTCGACGTGG TGCGCGACCGCGCGGCGCTGTCACGCATCGTGGCTGGCGGCAAGCTGGAGAACGTGTACCGGCTGCAGATCATGAACGCC ACCGAGCAGCCGCAGCACTACCGCATTGCCGCCGACGGACTTGACGGCCTGGCGCTGGCCTCGGATGCCGAGGTCGTGGT CGGCCCGGCAGAATCCCGCTGGGTCGCCGTGCGGCTGCAAATCCCCTACGGCTCGGCCACCCCCGGCTCGCACCCCATCC AGTTCAGCATCGGCGACATCGCGGGTGATGCCCATGTGAGCGAGAAGTCCGTGTTCCTTGTGCCCCGCTAG
Upstream 100 bases:
>100_bases GCTTCATGTGCTGACGGCTTACATCTGGGGCATGTCCAACAAGCCCCTTCCGGCCAAACCCTGAAGAGACCCTGAAAAGA TCCTGAAGAGAAAGTTTCGC
Downstream 100 bases:
>100_bases GAGATATTTCATGAACGACCTGCCCCAAGCCATTCCTCCTCCCTGGTGGAGGCACGGCCTTGTCTGGCTGGTGATCGCCG GCCCCGTGGCGGTGGTCGTT
Product: 4Fe-4S ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MQSSTRRKVIPIVPEAAHGQTESLYEAQKKVYPRSVTGLFARWRVACVILTQLVFYGLPWLEWGQRQAVLFDLGARRFYI FGYVLYPQDFIYLTGLLVVSALTLFLFTAVAGRLWCGFACPQTVYTEIFLWIERKVEGDRTLRMRLDGSPMSLEKLVKKW FKHILWLGLAMWTGFTFVGYFVPVRELGMQFLQTRMSGWEVFWVCFYGLATYGNAGFLREQVCKYMCPYARFQSAMFDRD TLIVSYDGGRGEPRGARSRTADLAALSLGACVDCTLCVQVCPTGIDIRNGLQYECIGCAACIDACDGVMDKMNYPRGLIR FTTQNALAQHWNRLQMWRQVLRPRVLVYGAILLALCVGLLWSLVARMPLKVDVVRDRAALSRIVAGGKLENVYRLQIMNA TEQPQHYRIAADGLDGLALASDAEVVVGPAESRWVAVRLQIPYGSATPGSHPIQFSIGDIAGDAHVSEKSVFLVPR
Sequences:
>Translated_476_residues MQSSTRRKVIPIVPEAAHGQTESLYEAQKKVYPRSVTGLFARWRVACVILTQLVFYGLPWLEWGQRQAVLFDLGARRFYI FGYVLYPQDFIYLTGLLVVSALTLFLFTAVAGRLWCGFACPQTVYTEIFLWIERKVEGDRTLRMRLDGSPMSLEKLVKKW FKHILWLGLAMWTGFTFVGYFVPVRELGMQFLQTRMSGWEVFWVCFYGLATYGNAGFLREQVCKYMCPYARFQSAMFDRD TLIVSYDGGRGEPRGARSRTADLAALSLGACVDCTLCVQVCPTGIDIRNGLQYECIGCAACIDACDGVMDKMNYPRGLIR FTTQNALAQHWNRLQMWRQVLRPRVLVYGAILLALCVGLLWSLVARMPLKVDVVRDRAALSRIVAGGKLENVYRLQIMNA TEQPQHYRIAADGLDGLALASDAEVVVGPAESRWVAVRLQIPYGSATPGSHPIQFSIGDIAGDAHVSEKSVFLVPR >Mature_476_residues MQSSTRRKVIPIVPEAAHGQTESLYEAQKKVYPRSVTGLFARWRVACVILTQLVFYGLPWLEWGQRQAVLFDLGARRFYI FGYVLYPQDFIYLTGLLVVSALTLFLFTAVAGRLWCGFACPQTVYTEIFLWIERKVEGDRTLRMRLDGSPMSLEKLVKKW FKHILWLGLAMWTGFTFVGYFVPVRELGMQFLQTRMSGWEVFWVCFYGLATYGNAGFLREQVCKYMCPYARFQSAMFDRD TLIVSYDGGRGEPRGARSRTADLAALSLGACVDCTLCVQVCPTGIDIRNGLQYECIGCAACIDACDGVMDKMNYPRGLIR FTTQNALAQHWNRLQMWRQVLRPRVLVYGAILLALCVGLLWSLVARMPLKVDVVRDRAALSRIVAGGKLENVYRLQIMNA TEQPQHYRIAADGLDGLALASDAEVVVGPAESRWVAVRLQIPYGSATPGSHPIQFSIGDIAGDAHVSEKSVFLVPR
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53618; Mature: 53618
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSTRRKVIPIVPEAAHGQTESLYEAQKKVYPRSVTGLFARWRVACVILTQLVFYGLPW CCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC LEWGQRQAVLFDLGARRFYIFGYVLYPQDFIYLTGLLVVSALTLFLFTAVAGRLWCGFAC HHCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PQTVYTEIFLWIERKVEGDRTLRMRLDGSPMSLEKLVKKWFKHILWLGLAMWTGFTFVGY HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVPVRELGMQFLQTRMSGWEVFWVCFYGLATYGNAGFLREQVCKYMCPYARFQSAMFDRD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCC TLIVSYDGGRGEPRGARSRTADLAALSLGACVDCTLCVQVCPTGIDIRNGLQYECIGCAA EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH CIDACDGVMDKMNYPRGLIRFTTQNALAQHWNRLQMWRQVLRPRVLVYGAILLALCVGLL HHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WSLVARMPLKVDVVRDRAALSRIVAGGKLENVYRLQIMNATEQPQHYRIAADGLDGLALA HHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEC SDAEVVVGPAESRWVAVRLQIPYGSATPGSHPIQFSIGDIAGDAHVSEKSVFLVPR CCCCEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECC >Mature Secondary Structure MQSSTRRKVIPIVPEAAHGQTESLYEAQKKVYPRSVTGLFARWRVACVILTQLVFYGLPW CCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC LEWGQRQAVLFDLGARRFYIFGYVLYPQDFIYLTGLLVVSALTLFLFTAVAGRLWCGFAC HHCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PQTVYTEIFLWIERKVEGDRTLRMRLDGSPMSLEKLVKKWFKHILWLGLAMWTGFTFVGY HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVPVRELGMQFLQTRMSGWEVFWVCFYGLATYGNAGFLREQVCKYMCPYARFQSAMFDRD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCC TLIVSYDGGRGEPRGARSRTADLAALSLGACVDCTLCVQVCPTGIDIRNGLQYECIGCAA EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH CIDACDGVMDKMNYPRGLIRFTTQNALAQHWNRLQMWRQVLRPRVLVYGAILLALCVGLL HHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WSLVARMPLKVDVVRDRAALSRIVAGGKLENVYRLQIMNATEQPQHYRIAADGLDGLALA HHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEC SDAEVVVGPAESRWVAVRLQIPYGSATPGSHPIQFSIGDIAGDAHVSEKSVFLVPR CCCCEEECCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]