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The map label for this gene is desA [H]

Identifier: 91790131

GI number: 91790131

Start: 4528230

End: 4529279

Strand: Reverse

Name: desA [H]

Synonym: Bpro_4293

Alternate gene names: 91790131

Gene position: 4529279-4528230 (Counterclockwise)

Preceding gene: 91790132

Following gene: 91790129

Centisome position: 87.1

GC content: 60.95

Gene sequence:

>1050_bases
ATGCCTGCTGATCTCACCGAAGTTATCCCGCACCGAAAAATCATCCGTTCCTGGCTTGCACCCATTGCCACCAAAAACAC
CGCGTATGCCCTGTTCCTGGTGGTGTCGGATCTCGTCCTGTTCGCGCTGGCGATCACGGCCACCGTGCTGTTGGACCAGC
CAGTGCTGCAGGTGCTGGCGGCCATTCTGAGCGGCCTGGTCATCGGGCGTCTTTTCATCCTGGGCCACGACGCCTGCCAC
CAGAGCCTGACCCCGCACCGCAGGCTCAACCGGTGGCTGGGGCGTCTGGTGTTCATGCCGTCCCTCACGCCTTACAGCCT
CTGGGACGTCGGCCACAACGTGGTCCATCATGGCTACACCAACCTCAAGGACTTCGACTTTGTGTGGCAACCGTATTCGA
TCGAAGCCTACCGGCGCATGCCCGCCTGGCGCAGGATGTGCGAGCGCATGTACCGAAGCGGCTGGGCACCGTGGCTTTAC
TACGGCGTTGAAATCTGGTGGAAGCGGATGTACTTCCCGTCCAGGGCGGTGATGCCCACACGCCGCGGCATTTTCACGGC
CGACTGTCTGTTGGTCACGGCGGTGGCGGCCGCCTGGCTTGCCGCGCTTGTCTATGCGGCATCCGCTACCGGTCAATCGG
TGGCGTGGCTGCTCGGTGTCGCGTTCTTGCTGCCGCTGATTGTGTGGAACGCCTTGATGGGCTTTGTCGTCTATGTCCAT
CACACGCATACCAGCGTTGCCTGGTACGAGCAAAAAAACGACTGGTCGGCGGCCAGCCCTTTTGTTTCGACCACGGTGCA
CCTGACATTCGGTGCAGGCATCGGCACCGCGCTGCATCACATCATGGAACACACGGCGCATCATGTCGACATGAGCCTGC
CGCTGTATCGCCTCAAGAAAGCGCAGGCGCTGCTCGAGAAAAAACTGCCGGGCCGGATCGTGATCCAGCCGTTTTCATGG
GCATGGTATTTCCAGACGGCCCGGCGCTGCAAGCTCTACGATTTCGAGCGGCAATGCTGGACAGACTTTGCCGGAAGGCG
AACGAGTTAG

Upstream 100 bases:

>100_bases
CCGGCGCCGGGCGGACCGGACGTCTGAATCTGGCCGATATCTCCTGTACGTCCTGCTGTCCTGCACTTTTTCCGCATCAA
CCACAACCTGCCGAAATTTC

Downstream 100 bases:

>100_bases
GACAACCGCGCAATGCAGGCACCCCAATGAGTGCACCCCGCTGCGCTTTTGCGCAGCGGGGTGCGTGGCTGTCGCACCGC
CAATGGCCGAAGCCGGGTGC

Product: fatty acid desaturase

Products: NA

Alternate protein names: Delta(12)-desaturase [H]

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MPADLTEVIPHRKIIRSWLAPIATKNTAYALFLVVSDLVLFALAITATVLLDQPVLQVLAAILSGLVIGRLFILGHDACH
QSLTPHRRLNRWLGRLVFMPSLTPYSLWDVGHNVVHHGYTNLKDFDFVWQPYSIEAYRRMPAWRRMCERMYRSGWAPWLY
YGVEIWWKRMYFPSRAVMPTRRGIFTADCLLVTAVAAAWLAALVYAASATGQSVAWLLGVAFLLPLIVWNALMGFVVYVH
HTHTSVAWYEQKNDWSAASPFVSTTVHLTFGAGIGTALHHIMEHTAHHVDMSLPLYRLKKAQALLEKKLPGRIVIQPFSW
AWYFQTARRCKLYDFERQCWTDFAGRRTS

Sequences:

>Translated_349_residues
MPADLTEVIPHRKIIRSWLAPIATKNTAYALFLVVSDLVLFALAITATVLLDQPVLQVLAAILSGLVIGRLFILGHDACH
QSLTPHRRLNRWLGRLVFMPSLTPYSLWDVGHNVVHHGYTNLKDFDFVWQPYSIEAYRRMPAWRRMCERMYRSGWAPWLY
YGVEIWWKRMYFPSRAVMPTRRGIFTADCLLVTAVAAAWLAALVYAASATGQSVAWLLGVAFLLPLIVWNALMGFVVYVH
HTHTSVAWYEQKNDWSAASPFVSTTVHLTFGAGIGTALHHIMEHTAHHVDMSLPLYRLKKAQALLEKKLPGRIVIQPFSW
AWYFQTARRCKLYDFERQCWTDFAGRRTS
>Mature_348_residues
PADLTEVIPHRKIIRSWLAPIATKNTAYALFLVVSDLVLFALAITATVLLDQPVLQVLAAILSGLVIGRLFILGHDACHQ
SLTPHRRLNRWLGRLVFMPSLTPYSLWDVGHNVVHHGYTNLKDFDFVWQPYSIEAYRRMPAWRRMCERMYRSGWAPWLYY
GVEIWWKRMYFPSRAVMPTRRGIFTADCLLVTAVAAAWLAALVYAASATGQSVAWLLGVAFLLPLIVWNALMGFVVYVHH
THTSVAWYEQKNDWSAASPFVSTTVHLTFGAGIGTALHHIMEHTAHHVDMSLPLYRLKKAQALLEKKLPGRIVIQPFSWA
WYFQTARRCKLYDFERQCWTDFAGRRTS

Specific function: Can introduce a second cis double bond at the Delta(12) position of fatty acid bound to membranes glycerolipids. This enzyme is involved in chilling tolerance because the phase transition temperature of lipids of cellular membranes depends on the degree o

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI71999459, Length=268, Percent_Identity=27.9850746268657, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 40041; Mature: 39910

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PADLTEVIPHRKIIRSWLAPIATKNTAYALFLVVSDLVLFALAITATVLLDQPVLQVLA
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AILSGLVIGRLFILGHDACHQSLTPHRRLNRWLGRLVFMPSLTPYSLWDVGHNVVHHGYT
HHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
NLKDFDFVWQPYSIEAYRRMPAWRRMCERMYRSGWAPWLYYGVEIWWKRMYFPSRAVMPT
CCCCCCCEECCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
RRGIFTADCLLVTAVAAAWLAALVYAASATGQSVAWLLGVAFLLPLIVWNALMGFVVYVH
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
HTHTSVAWYEQKNDWSAASPFVSTTVHLTFGAGIGTALHHIMEHTAHHVDMSLPLYRLKK
ECCCEEEEEECCCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
AQALLEKKLPGRIVIQPFSWAWYFQTARRCKLYDFERQCWTDFAGRRTS
HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA