| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ilvA [H]
Identifier: 91790083
GI number: 91790083
Start: 4471177
End: 4472184
Strand: Direct
Name: ilvA [H]
Synonym: Bpro_4245
Alternate gene names: 91790083
Gene position: 4471177-4472184 (Clockwise)
Preceding gene: 91790082
Following gene: 91790084
Centisome position: 85.98
GC content: 68.06
Gene sequence:
>1008_bases ATGAGCACCACGCTGCACGGCACGCCCACGGTCACCCCGCGGGCCGATGGCCTTCCTTCGCTGCGCGCCATCGAAGAGGC GGCCGGCGTGGTCTACCGGGAGTTCCAGGCCACGCCGCAATACCGCTGGGGCCTGTCCAGCCAGCGGCTGGGCACCGACT GCTGGATCAAGCACGAGAACCACACGCCGGTTGGCGCCTTCAAGATCCGCGGCGGCCTCACCTACTTTGACGCCCTGAAA AAAAGCGGCACGCTCCCCCTCGAGGTCATCAGCGCCACACGGGGCAACCACGGCCAGAGCATAGGCTGGGCCGCCCGCGC CCATGGTGTGGCCTGCACCATCGTCGTTCCGCACGGCAATTCGATCGAGAAGAATGCAGCCATGCGTGCGCTCGGCGTGA CGCTGATCGAGCACGGCCAGGACTTCCAGGAGAGCCGCGAATTTGCCATCCAGCTGGCCGCCGAACGCGGCGCCCACATG GTGCCCAGCTTTCACGCTGACCTGCTGCGCGGCGTGGCTACCAGCTGGTGGGAATTCATGCAGGCCGTGCCGCAGCTGGA CGTGGTGTACGTGCCGATTGGCCAGGGCTCCGGGGCCTGCTCGGCCATTGCCGCCAAACTGGCGCTCGGACGTAAGCTGC GCATCGTCGGCGTGGTGAGCGCGCATGCCACCACCTACGCCGATTCCCTGGCGGCAGGCCGCGTGGTCGAGGCACCGGTG ACAACCCGGCTGGCCGACGGCATGGCCTGTCGTATCGCGGACCCTGCGGCGCTCGAACTCATGGCGCCCCATATCGACCA CCTGGTGCAGGTCACCGATGACGAGGTCGCGCAGGCGATGCGCGATCTGTATGCGGACACGCACAACGTGGCCGAAGGGG CAGGCGCGGCCAGCTTTGCCGCCGCCATGCAGGAGCGCAGCGAGCTCAAGGGACAGGTGGTCGGCACCACGCTGTGCGGC AGCAATGTGGACAGCACCACGCTGGCCAGCGTACTCGGGGCCTGCTGA
Upstream 100 bases:
>100_bases CTGGCGCTACGCCTGCTGTCCGAGAAGCGGGCTGCGGCATGAGCCGCCGGGCCGCTCCCAAGGCGAAAGGCACCGCAGCG CGCAGTGCGGAGGTCAAGCA
Downstream 100 bases:
>100_bases CGCCCGCCCTGTCGTCGCACTTGGGACAGGCTGCGGCGCCCGCCTGGCCTAAATTCACGCCATGGGAACCCTTTACCTCG TGCGCCATGGCCAGGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSTTLHGTPTVTPRADGLPSLRAIEEAAGVVYREFQATPQYRWGLSSQRLGTDCWIKHENHTPVGAFKIRGGLTYFDALK KSGTLPLEVISATRGNHGQSIGWAARAHGVACTIVVPHGNSIEKNAAMRALGVTLIEHGQDFQESREFAIQLAAERGAHM VPSFHADLLRGVATSWWEFMQAVPQLDVVYVPIGQGSGACSAIAAKLALGRKLRIVGVVSAHATTYADSLAAGRVVEAPV TTRLADGMACRIADPAALELMAPHIDHLVQVTDDEVAQAMRDLYADTHNVAEGAGAASFAAAMQERSELKGQVVGTTLCG SNVDSTTLASVLGAC
Sequences:
>Translated_335_residues MSTTLHGTPTVTPRADGLPSLRAIEEAAGVVYREFQATPQYRWGLSSQRLGTDCWIKHENHTPVGAFKIRGGLTYFDALK KSGTLPLEVISATRGNHGQSIGWAARAHGVACTIVVPHGNSIEKNAAMRALGVTLIEHGQDFQESREFAIQLAAERGAHM VPSFHADLLRGVATSWWEFMQAVPQLDVVYVPIGQGSGACSAIAAKLALGRKLRIVGVVSAHATTYADSLAAGRVVEAPV TTRLADGMACRIADPAALELMAPHIDHLVQVTDDEVAQAMRDLYADTHNVAEGAGAASFAAAMQERSELKGQVVGTTLCG SNVDSTTLASVLGAC >Mature_334_residues STTLHGTPTVTPRADGLPSLRAIEEAAGVVYREFQATPQYRWGLSSQRLGTDCWIKHENHTPVGAFKIRGGLTYFDALKK SGTLPLEVISATRGNHGQSIGWAARAHGVACTIVVPHGNSIEKNAAMRALGVTLIEHGQDFQESREFAIQLAAERGAHMV PSFHADLLRGVATSWWEFMQAVPQLDVVYVPIGQGSGACSAIAAKLALGRKLRIVGVVSAHATTYADSLAAGRVVEAPVT TRLADGMACRIADPAALELMAPHIDHLVQVTDDEVAQAMRDLYADTHNVAEGAGAASFAAAMQERSELKGQVVGTTLCGS NVDSTTLASVLGAC
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=323, Percent_Identity=26.3157894736842, Blast_Score=85, Evalue=7e-17, Organism=Escherichia coli, GI1790207, Length=337, Percent_Identity=29.3768545994065, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1789505, Length=322, Percent_Identity=26.3975155279503, Blast_Score=92, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71991565, Length=326, Percent_Identity=27.9141104294479, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17537387, Length=288, Percent_Identity=30.2083333333333, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17508781, Length=282, Percent_Identity=24.468085106383, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6322631, Length=319, Percent_Identity=28.8401253918495, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6320930, Length=302, Percent_Identity=29.1390728476821, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI21355833, Length=333, Percent_Identity=29.4294294294294, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24645328, Length=222, Percent_Identity=31.0810810810811, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 35402; Mature: 35270
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLHGTPTVTPRADGLPSLRAIEEAAGVVYREFQATPQYRWGLSSQRLGTDCWIKHEN CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECC HTPVGAFKIRGGLTYFDALKKSGTLPLEVISATRGNHGQSIGWAARAHGVACTIVVPHGN CCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHCCCEEEEEEEECCC SIEKNAAMRALGVTLIEHGQDFQESREFAIQLAAERGAHMVPSFHADLLRGVATSWWEFM CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH QAVPQLDVVYVPIGQGSGACSAIAAKLALGRKLRIVGVVSAHATTYADSLAAGRVVEAPV HHCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEEEEEEHHHHHHHHHHHCCCEEECCH TTRLADGMACRIADPAALELMAPHIDHLVQVTDDEVAQAMRDLYADTHNVAEGAGAASFA HHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHCCCHHHHH AAMQERSELKGQVVGTTLCGSNVDSTTLASVLGAC HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCC >Mature Secondary Structure STTLHGTPTVTPRADGLPSLRAIEEAAGVVYREFQATPQYRWGLSSQRLGTDCWIKHEN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECC HTPVGAFKIRGGLTYFDALKKSGTLPLEVISATRGNHGQSIGWAARAHGVACTIVVPHGN CCCCEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHCCCEEEEEEEECCC SIEKNAAMRALGVTLIEHGQDFQESREFAIQLAAERGAHMVPSFHADLLRGVATSWWEFM CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH QAVPQLDVVYVPIGQGSGACSAIAAKLALGRKLRIVGVVSAHATTYADSLAAGRVVEAPV HHCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEEEEEEHHHHHHHHHHHCCCEEECCH TTRLADGMACRIADPAALELMAPHIDHLVQVTDDEVAQAMRDLYADTHNVAEGAGAASFA HHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHCCCHHHHH AAMQERSELKGQVVGTTLCGSNVDSTTLASVLGAC HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]