Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790058

Identifier: 91790058

GI number: 91790058

Start: 4440578

End: 4441246

Strand: Reverse

Name: 91790058

Synonym: Bpro_4220

Alternate gene names: NA

Gene position: 4441246-4440578 (Counterclockwise)

Preceding gene: 91790059

Following gene: 91790057

Centisome position: 85.4

GC content: 62.03

Gene sequence:

>669_bases
ATGCAAACAATGCTGGATAACGGCCTTTTAAATGCCAGTCTGCCGCTGGCTCCCGGTGGCCTGGATGCGGCCACGGACAA
TGAGCCGGACCTGATGGCCTTGCTGATGGATGAACTGGCCCATGGTGTGCTGGTCATCAACGTGCAGGGCCGGATTTTCC
ACGCCAACCAGGCGGCACGCCGCGAGCTTGCGCGTGGTTTTGTGTTGAACGCCAGTCATGGTGAACTCAAAGTCGTTTCA
TCCACCGATGCCACGGCACTCCAGGTTGCCTTGGGCAAAGCCGTGGACGGCAAACGCAGTCTGCTCAAGTTGACGGCTAG
CGGCGCGGATGTCATGCTGGCCGTCATTCCCCTCAATCGCCAGATGGGGGCACCCTGCGAACGCATCGCGCTGTTTTTGT
CGCGCCCGGGCGTCTGCGACTCGGGCGTTTTCGGCTCGTTTGCCCGCAGCCATGGCCTCACGCACACCGAAGAGCAGGTG
CTGGCCTCGTTGTGCCGCTGCCTGAGCACCCCGGAAATCGCGCTCCAGATGAAGGTGGCTGTGTCAACCGTGCGCAGCCA
TGTTCGCAGCCTGTGCATCAAAACCGCTTCCAGCGGCGTTCGCGAGCTGGTCAACCGGGTGGCCATCCTGCCGCCCATTG
CGCCCCTGCCACTGGGGAAAATGCACTGA

Upstream 100 bases:

>100_bases
TGACATGGTAATTTCGCACAAAAATCGGCGACCAGATTCACTATCCAGATCAGCCGCGACTTTCTACGCTCATCTATTTA
GAGGATGGAGCGACTTGAAT

Downstream 100 bases:

>100_bases
GGGTTATCACGGCGTGACGTGACCCGATCCTCCACTTGCTGCCGGCAGGTTGGTTGGTTATCCCGGCACCTTGCTCCGGG
TGTTGCCGCATGGCTTGAGC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MQTMLDNGLLNASLPLAPGGLDAATDNEPDLMALLMDELAHGVLVINVQGRIFHANQAARRELARGFVLNASHGELKVVS
STDATALQVALGKAVDGKRSLLKLTASGADVMLAVIPLNRQMGAPCERIALFLSRPGVCDSGVFGSFARSHGLTHTEEQV
LASLCRCLSTPEIALQMKVAVSTVRSHVRSLCIKTASSGVRELVNRVAILPPIAPLPLGKMH

Sequences:

>Translated_222_residues
MQTMLDNGLLNASLPLAPGGLDAATDNEPDLMALLMDELAHGVLVINVQGRIFHANQAARRELARGFVLNASHGELKVVS
STDATALQVALGKAVDGKRSLLKLTASGADVMLAVIPLNRQMGAPCERIALFLSRPGVCDSGVFGSFARSHGLTHTEEQV
LASLCRCLSTPEIALQMKVAVSTVRSHVRSLCIKTASSGVRELVNRVAILPPIAPLPLGKMH
>Mature_222_residues
MQTMLDNGLLNASLPLAPGGLDAATDNEPDLMALLMDELAHGVLVINVQGRIFHANQAARRELARGFVLNASHGELKVVS
STDATALQVALGKAVDGKRSLLKLTASGADVMLAVIPLNRQMGAPCERIALFLSRPGVCDSGVFGSFARSHGLTHTEEQV
LASLCRCLSTPEIALQMKVAVSTVRSHVRSLCIKTASSGVRELVNRVAILPPIAPLPLGKMH

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23442; Mature: 23442

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTMLDNGLLNASLPLAPGGLDAATDNEPDLMALLMDELAHGVLVINVQGRIFHANQAAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEECCHHHH
RELARGFVLNASHGELKVVSSTDATALQVALGKAVDGKRSLLKLTASGADVMLAVIPLNR
HHHHHCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHEEEECCCCEEEEEEEECCC
QMGAPCERIALFLSRPGVCDSGVFGSFARSHGLTHTEEQVLASLCRCLSTPEIALQMKVA
CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
VSTVRSHVRSLCIKTASSGVRELVNRVAILPPIAPLPLGKMH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQTMLDNGLLNASLPLAPGGLDAATDNEPDLMALLMDELAHGVLVINVQGRIFHANQAAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEECCHHHH
RELARGFVLNASHGELKVVSSTDATALQVALGKAVDGKRSLLKLTASGADVMLAVIPLNR
HHHHHCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHEEEECCCCEEEEEEEECCC
QMGAPCERIALFLSRPGVCDSGVFGSFARSHGLTHTEEQVLASLCRCLSTPEIALQMKVA
CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
VSTVRSHVRSLCIKTASSGVRELVNRVAILPPIAPLPLGKMH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA