| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790058
Identifier: 91790058
GI number: 91790058
Start: 4440578
End: 4441246
Strand: Reverse
Name: 91790058
Synonym: Bpro_4220
Alternate gene names: NA
Gene position: 4441246-4440578 (Counterclockwise)
Preceding gene: 91790059
Following gene: 91790057
Centisome position: 85.4
GC content: 62.03
Gene sequence:
>669_bases ATGCAAACAATGCTGGATAACGGCCTTTTAAATGCCAGTCTGCCGCTGGCTCCCGGTGGCCTGGATGCGGCCACGGACAA TGAGCCGGACCTGATGGCCTTGCTGATGGATGAACTGGCCCATGGTGTGCTGGTCATCAACGTGCAGGGCCGGATTTTCC ACGCCAACCAGGCGGCACGCCGCGAGCTTGCGCGTGGTTTTGTGTTGAACGCCAGTCATGGTGAACTCAAAGTCGTTTCA TCCACCGATGCCACGGCACTCCAGGTTGCCTTGGGCAAAGCCGTGGACGGCAAACGCAGTCTGCTCAAGTTGACGGCTAG CGGCGCGGATGTCATGCTGGCCGTCATTCCCCTCAATCGCCAGATGGGGGCACCCTGCGAACGCATCGCGCTGTTTTTGT CGCGCCCGGGCGTCTGCGACTCGGGCGTTTTCGGCTCGTTTGCCCGCAGCCATGGCCTCACGCACACCGAAGAGCAGGTG CTGGCCTCGTTGTGCCGCTGCCTGAGCACCCCGGAAATCGCGCTCCAGATGAAGGTGGCTGTGTCAACCGTGCGCAGCCA TGTTCGCAGCCTGTGCATCAAAACCGCTTCCAGCGGCGTTCGCGAGCTGGTCAACCGGGTGGCCATCCTGCCGCCCATTG CGCCCCTGCCACTGGGGAAAATGCACTGA
Upstream 100 bases:
>100_bases TGACATGGTAATTTCGCACAAAAATCGGCGACCAGATTCACTATCCAGATCAGCCGCGACTTTCTACGCTCATCTATTTA GAGGATGGAGCGACTTGAAT
Downstream 100 bases:
>100_bases GGGTTATCACGGCGTGACGTGACCCGATCCTCCACTTGCTGCCGGCAGGTTGGTTGGTTATCCCGGCACCTTGCTCCGGG TGTTGCCGCATGGCTTGAGC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MQTMLDNGLLNASLPLAPGGLDAATDNEPDLMALLMDELAHGVLVINVQGRIFHANQAARRELARGFVLNASHGELKVVS STDATALQVALGKAVDGKRSLLKLTASGADVMLAVIPLNRQMGAPCERIALFLSRPGVCDSGVFGSFARSHGLTHTEEQV LASLCRCLSTPEIALQMKVAVSTVRSHVRSLCIKTASSGVRELVNRVAILPPIAPLPLGKMH
Sequences:
>Translated_222_residues MQTMLDNGLLNASLPLAPGGLDAATDNEPDLMALLMDELAHGVLVINVQGRIFHANQAARRELARGFVLNASHGELKVVS STDATALQVALGKAVDGKRSLLKLTASGADVMLAVIPLNRQMGAPCERIALFLSRPGVCDSGVFGSFARSHGLTHTEEQV LASLCRCLSTPEIALQMKVAVSTVRSHVRSLCIKTASSGVRELVNRVAILPPIAPLPLGKMH >Mature_222_residues MQTMLDNGLLNASLPLAPGGLDAATDNEPDLMALLMDELAHGVLVINVQGRIFHANQAARRELARGFVLNASHGELKVVS STDATALQVALGKAVDGKRSLLKLTASGADVMLAVIPLNRQMGAPCERIALFLSRPGVCDSGVFGSFARSHGLTHTEEQV LASLCRCLSTPEIALQMKVAVSTVRSHVRSLCIKTASSGVRELVNRVAILPPIAPLPLGKMH
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23442; Mature: 23442
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS00622 HTH_LUXR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTMLDNGLLNASLPLAPGGLDAATDNEPDLMALLMDELAHGVLVINVQGRIFHANQAAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEECCHHHH RELARGFVLNASHGELKVVSSTDATALQVALGKAVDGKRSLLKLTASGADVMLAVIPLNR HHHHHCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHEEEECCCCEEEEEEEECCC QMGAPCERIALFLSRPGVCDSGVFGSFARSHGLTHTEEQVLASLCRCLSTPEIALQMKVA CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH VSTVRSHVRSLCIKTASSGVRELVNRVAILPPIAPLPLGKMH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MQTMLDNGLLNASLPLAPGGLDAATDNEPDLMALLMDELAHGVLVINVQGRIFHANQAAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEECCHHHH RELARGFVLNASHGELKVVSSTDATALQVALGKAVDGKRSLLKLTASGADVMLAVIPLNR HHHHHCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHEEEECCCCEEEEEEEECCC QMGAPCERIALFLSRPGVCDSGVFGSFARSHGLTHTEEQVLASLCRCLSTPEIALQMKVA CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH VSTVRSHVRSLCIKTASSGVRELVNRVAILPPIAPLPLGKMH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA