| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790031
Identifier: 91790031
GI number: 91790031
Start: 4405860
End: 4407044
Strand: Direct
Name: 91790031
Synonym: Bpro_4193
Alternate gene names: NA
Gene position: 4405860-4407044 (Clockwise)
Preceding gene: 91790018
Following gene: 91790032
Centisome position: 84.72
GC content: 65.65
Gene sequence:
>1185_bases ATGAACCTCCTTGAACAGCGGCTCGATTACCCACTGGCGGATACCCTGCCCGAGGCAGGCGAGGCACTTGAGATTGCACC GGGCGTCAAGTGGATACGCATGGCGCTGCCATTCGCGCTGGACCACATCAACCTGTGGCTGCTGCGCGATGAGCTCGATG ACCCGCACAACGCGGGCGTAAAAATCCAGGGCTGGAGCGTGGTGGACTGCTGCATCAGCAGGGAAGAGTCCAAGGCGCAA TGGGAAGCGATTTTTGCGACCCAGCTTGAAGGCCTGCCCATCCTGCGCGTCATCGTGACCCACATGCATCCGGACCACAT AGGCCTGGCGCACTGGCTTTGCCAGCGCTGGTCAACTCCTGCGGGGCCCGCCGACGAGCCGCCTCTAGGCGGGCCCGGCC CCCTCGGGGGGCAGCAACCCGCGCAGCGGCGGAGCGTGGGGGCGCCATGGACTTGTCGCCTGTGGATGAGCGCCACCGAC TACCACAGCGCCCGCATCGGCACCCAGAGCACCACCGGTTTTGGCGGAGACAGTGCCGCGCTCTTTTTCACCGCCCACGG GCTGACCGACCCGGAGTCCGTCGAGAAGATCAGGGGCCGCACCGGCTACTACGCCAGCATGGTGCCCGAGGTGCCGGGCA GCTTTCGCCGCCTGGTCGACGGGCAGATGATCCGCATTGGCGGGCGGGACTGGCGCTGCATCAGTGGTTATGGCCATGCG CCGGAGCACATGGCGCTGTACTGTGATTCGACCCGGGTGCTGATCAGTGGCGACATGGTGCTGCCCCGCATCTCGACCAA CGTCAGCGTCTACGACATGGAGCCGGAATCAAACCCGCTTGCGCTGTTCCTGCAGTCCATCGACAAATTCCGGCCCCTGC CGCCCGACACGCTGACCCTGCCCTCGCACGGCAAGCCGTTCCGTGGCCTGCACGAGCGTATCCAGCAGTTGCACGACCAC CACCGCGACCGGCTGGCCGAGGTGTTGCAGGCCTGTCAGGCCCGGCCCTGCAGCGCAGCCGACATCCTGCCCGTGATGTT CAGGCGAAAGCTGGACCTGCACCAGACCAGTTTTGCCATGGGCGAATCAGTTGCGCACCTGCATGCACTGTGGTTTGAGG GACGGGTGCACCGGCGGATCGATGCCGCCGGCGTCTTCCGCTTTGAAGCCCCATCGCCGCACTGA
Upstream 100 bases:
>100_bases GGCAAGGACACGGACAAAGGTGACAGCGCCGGGCGGGCGTCATCACTACAATGGCTCCACGTGACGTTTACGTAAACGTC AAATATAGCGCGAATATTAC
Downstream 100 bases:
>100_bases AACCATAGGCTAAAACCGCAGGCGCGGGGCCGGGACTACGCGGCAAGGCCTCGAGCGGGCGCCCGGGACTTTGCAACACC GGCGCCGCAGGCTCAGCGTT
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase; Metallo-Beta-Lactamase Domain Protein; Zinc Metallohydrolase Glyoxalase II Family; Beta Lactamase; Metallo-Dependent Enzymatic Protein; AMP-Dependent Synthetase And Ligase; Zinc Metallohydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MNLLEQRLDYPLADTLPEAGEALEIAPGVKWIRMALPFALDHINLWLLRDELDDPHNAGVKIQGWSVVDCCISREESKAQ WEAIFATQLEGLPILRVIVTHMHPDHIGLAHWLCQRWSTPAGPADEPPLGGPGPLGGQQPAQRRSVGAPWTCRLWMSATD YHSARIGTQSTTGFGGDSAALFFTAHGLTDPESVEKIRGRTGYYASMVPEVPGSFRRLVDGQMIRIGGRDWRCISGYGHA PEHMALYCDSTRVLISGDMVLPRISTNVSVYDMEPESNPLALFLQSIDKFRPLPPDTLTLPSHGKPFRGLHERIQQLHDH HRDRLAEVLQACQARPCSAADILPVMFRRKLDLHQTSFAMGESVAHLHALWFEGRVHRRIDAAGVFRFEAPSPH
Sequences:
>Translated_394_residues MNLLEQRLDYPLADTLPEAGEALEIAPGVKWIRMALPFALDHINLWLLRDELDDPHNAGVKIQGWSVVDCCISREESKAQ WEAIFATQLEGLPILRVIVTHMHPDHIGLAHWLCQRWSTPAGPADEPPLGGPGPLGGQQPAQRRSVGAPWTCRLWMSATD YHSARIGTQSTTGFGGDSAALFFTAHGLTDPESVEKIRGRTGYYASMVPEVPGSFRRLVDGQMIRIGGRDWRCISGYGHA PEHMALYCDSTRVLISGDMVLPRISTNVSVYDMEPESNPLALFLQSIDKFRPLPPDTLTLPSHGKPFRGLHERIQQLHDH HRDRLAEVLQACQARPCSAADILPVMFRRKLDLHQTSFAMGESVAHLHALWFEGRVHRRIDAAGVFRFEAPSPH >Mature_394_residues MNLLEQRLDYPLADTLPEAGEALEIAPGVKWIRMALPFALDHINLWLLRDELDDPHNAGVKIQGWSVVDCCISREESKAQ WEAIFATQLEGLPILRVIVTHMHPDHIGLAHWLCQRWSTPAGPADEPPLGGPGPLGGQQPAQRRSVGAPWTCRLWMSATD YHSARIGTQSTTGFGGDSAALFFTAHGLTDPESVEKIRGRTGYYASMVPEVPGSFRRLVDGQMIRIGGRDWRCISGYGHA PEHMALYCDSTRVLISGDMVLPRISTNVSVYDMEPESNPLALFLQSIDKFRPLPPDTLTLPSHGKPFRGLHERIQQLHDH HRDRLAEVLQACQARPCSAADILPVMFRRKLDLHQTSFAMGESVAHLHALWFEGRVHRRIDAAGVFRFEAPSPH
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43946; Mature: 43946
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLEQRLDYPLADTLPEAGEALEIAPGVKWIRMALPFALDHINLWLLRDELDDPHNAGV CCHHHHHCCCCCHHCCCCCCCEEEECCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCE KIQGWSVVDCCISREESKAQWEAIFATQLEGLPILRVIVTHMHPDHIGLAHWLCQRWSTP EEECCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC AGPADEPPLGGPGPLGGQQPAQRRSVGAPWTCRLWMSATDYHSARIGTQSTTGFGGDSAA CCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCCCCEE LFFTAHGLTDPESVEKIRGRTGYYASMVPEVPGSFRRLVDGQMIRIGGRDWRCISGYGHA EEEEECCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCEEEECCCCEEEECCCCCC PEHMALYCDSTRVLISGDMVLPRISTNVSVYDMEPESNPLALFLQSIDKFRPLPPDTLTL CCCEEEEECCCEEEEECCEEECEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEC PSHGKPFRGLHERIQQLHDHHRDRLAEVLQACQARPCSAADILPVMFRRKLDLHQTSFAM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GESVAHLHALWFEGRVHRRIDAAGVFRFEAPSPH HHHHHHHHHHHHCCHHHHEECCCEEEEECCCCCC >Mature Secondary Structure MNLLEQRLDYPLADTLPEAGEALEIAPGVKWIRMALPFALDHINLWLLRDELDDPHNAGV CCHHHHHCCCCCHHCCCCCCCEEEECCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCE KIQGWSVVDCCISREESKAQWEAIFATQLEGLPILRVIVTHMHPDHIGLAHWLCQRWSTP EEECCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC AGPADEPPLGGPGPLGGQQPAQRRSVGAPWTCRLWMSATDYHSARIGTQSTTGFGGDSAA CCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCHHCCCCCCCCCCCCCCEE LFFTAHGLTDPESVEKIRGRTGYYASMVPEVPGSFRRLVDGQMIRIGGRDWRCISGYGHA EEEEECCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHCCCEEEECCCCEEEECCCCCC PEHMALYCDSTRVLISGDMVLPRISTNVSVYDMEPESNPLALFLQSIDKFRPLPPDTLTL CCCEEEEECCCEEEEECCEEECEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEC PSHGKPFRGLHERIQQLHDHHRDRLAEVLQACQARPCSAADILPVMFRRKLDLHQTSFAM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GESVAHLHALWFEGRVHRRIDAAGVFRFEAPSPH HHHHHHHHHHHHCCHHHHEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA