| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is glpE [C]
Identifier: 91790021
GI number: 91790021
Start: 4396371
End: 4396793
Strand: Reverse
Name: glpE [C]
Synonym: Bpro_4183
Alternate gene names: 91790021
Gene position: 4396793-4396371 (Counterclockwise)
Preceding gene: 91790022
Following gene: 91790020
Centisome position: 84.55
GC content: 63.59
Gene sequence:
>423_bases ATGCCCATTACCAAAGGATTCCGTGCCCTGGTCGATGAGGCCATGGCGCAGGTCAAAACTTACAGCGTGCAAGAGGCCAT GGCAAAACTCAACGATCCCAAAGTGCAGATCGTCGATATCCGCGATGTGCGCGAGCTGGCGGGCGGCACGGTGGTGGGCG CCTACCATGCGCCCCGCGGCATGCTCGAGTTCTGGGTGGACCCCGCCTCGCCATACCACAAGCCCGTGTTTGCCGATGAG GGCAAGGAGTTCATCCTGTTCTGTGGCGCCGGCTGGCGCAGCGCACTGGCCGCCAAGACGCTGCAGGACATGGGCATGAC CAACGTCGCCCACATCGACGGCGGTTACGCCGAGTGGGTGAAGCAGGGCGCGCCCACCGAAACGCTGGAAGACCGCGAAA AGCGCAAGGCCAGGAAGGGCTGA
Upstream 100 bases:
>100_bases GGGGCAGGTAACGGCAGGGAGTCACCTCTGGCTACACATGCAGAAAATCATCATTCAGCAGGCCCTTGCCTGAGCCCGTA ACCCCCGAAGGAGACATAAC
Downstream 100 bases:
>100_bases TGCCGGCTGCTCTGCTACCTGGCGCTGGCTGCCCCTGCGGCCGCCTGGGCGCATCCGGAAAACCCCTCGCGTTTGCCCAA TGCTGCGGCCGCTACCTGGA
Product: rhodanese-like protein
Products: H+; Sulfite; Thiocyanate [C]
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Rhodanese Domain Protein Sulfur Transferase; Sulfide Dehydrogenase; Molybdopterin Biosynthesis Protein MoeB; Rhodanese-Like Domain-Containing Protein; Metallo-Beta-Lactamase Superfamily Protein; Molybdopterin Biosynthesis Protein; Rhodanese-Like Family Protein; Beta-Lactamase-Like; Rhodanese-Like Domain Protein; Bifunctional Glyoxylase/Rhodanese-Like Sulfurtransferase; Rhodanese-Domain Protein; Rhodanese/Moeb/Thif Domain Protein
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPITKGFRALVDEAMAQVKTYSVQEAMAKLNDPKVQIVDIRDVRELAGGTVVGAYHAPRGMLEFWVDPASPYHKPVFADE GKEFILFCGAGWRSALAAKTLQDMGMTNVAHIDGGYAEWVKQGAPTETLEDREKRKARKG
Sequences:
>Translated_140_residues MPITKGFRALVDEAMAQVKTYSVQEAMAKLNDPKVQIVDIRDVRELAGGTVVGAYHAPRGMLEFWVDPASPYHKPVFADE GKEFILFCGAGWRSALAAKTLQDMGMTNVAHIDGGYAEWVKQGAPTETLEDREKRKARKG >Mature_139_residues PITKGFRALVDEAMAQVKTYSVQEAMAKLNDPKVQIVDIRDVRELAGGTVVGAYHAPRGMLEFWVDPASPYHKPVFADEG KEFILFCGAGWRSALAAKTLQDMGMTNVAHIDGGYAEWVKQGAPTETLEDREKRKARKG
Specific function: Catalyzes, Although With Low Efficiency, The Sulfur Transfer Reaction From Thiosulfate To Cyanide. The Relatively Low Affinity Of Glpe For Both Thiosulfate And Cyanide Suggests That These Compounds Are Not The Physiological Substrates. Thioredoxin 1 Or Re
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.8.1.1 [C]
Molecular weight: Translated: 15453; Mature: 15322
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITKGFRALVDEAMAQVKTYSVQEAMAKLNDPKVQIVDIRDVRELAGGTVVGAYHAPRG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCEEECCCCCCC MLEFWVDPASPYHKPVFADEGKEFILFCGAGWRSALAAKTLQDMGMTNVAHIDGGYAEWV HHHEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCHHHHH KQGAPTETLEDREKRKARKG HCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure PITKGFRALVDEAMAQVKTYSVQEAMAKLNDPKVQIVDIRDVRELAGGTVVGAYHAPRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCEEECCCCCCC MLEFWVDPASPYHKPVFADEGKEFILFCGAGWRSALAAKTLQDMGMTNVAHIDGGYAEWV HHHEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCHHHHH KQGAPTETLEDREKRKARKG HCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cyanide; Thiosulfate [C]
Specific reaction: Cyanide + Thiosulfate --> H+ + Sulfite + Thiocyanate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA