| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790000
Identifier: 91790000
GI number: 91790000
Start: 4378732
End: 4379319
Strand: Reverse
Name: 91790000
Synonym: Bpro_4162
Alternate gene names: NA
Gene position: 4379319-4378732 (Counterclockwise)
Preceding gene: 91790001
Following gene: 91789999
Centisome position: 84.21
GC content: 50.34
Gene sequence:
>588_bases ATGACAATCGAAGACGGGCTCACACTCATCGGCGCAGTCGCTATCTCCTTCGGTGGTGGCGCTGTGATCGTCATCGGCCT GTCAACTTACCTCGCCGATCTTTGGGCAAAACGGACCCTGCAACGCGAGCAATCTGCACTACAGGCACAACTCGAAGAGA TGAAACATGAGCTTGGCCTCGCCAAGTCAAGTTACGACCGCTATCTTGATCTCGTTCTTGAATACTACGGGGTCTTTTAC CGCCACTATCGTATGTGCCAGCGCACCGCGAACGCAGATGCCCATCGTCAGCCCGACGGAAAAATTACATTCACGCAAGA TGAGTTTCTCGCGAACCTTGATGTTTTCCTTGTCGACTGGGCAGCCCAAGAGGGGGAAATTCGGCTCCTCCTTCCGTCCA AGCTCCTGGAGCTTCATGGTGAGGCTATTGATTGCTTCAATCGCTTCAAGCATTCAGTGGAAAACTTTCGCAAAGATGAT GTCACTCGCAAAGCAAAGGAAGACGCGTTTGTACAAATTGAAAGTGTGAAGTCAAGACTTGAAGAATCACTTCGAGAGTT TCTTCGAACGGAAAAACTGCTCAAGTGA
Upstream 100 bases:
>100_bases GAGTCCAGCACCTCGAACACCTCGTTGCACCGGACTGGCCGCCTGCGGCGTCCATCCCGGTGAGCTCAAACGTGAAGTCG CTTAACACTGTCGCGCACCA
Downstream 100 bases:
>100_bases TGCAAGCGGCGTCCAACCCTGCAGCTTGGACTTCCCACGAACTCAAGCAACGTTACGCGATAGTTTTTCCTTGATGACGG TATTTCCTGCGGTGGCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTIEDGLTLIGAVAISFGGGAVIVIGLSTYLADLWAKRTLQREQSALQAQLEEMKHELGLAKSSYDRYLDLVLEYYGVFY RHYRMCQRTANADAHRQPDGKITFTQDEFLANLDVFLVDWAAQEGEIRLLLPSKLLELHGEAIDCFNRFKHSVENFRKDD VTRKAKEDAFVQIESVKSRLEESLREFLRTEKLLK
Sequences:
>Translated_195_residues MTIEDGLTLIGAVAISFGGGAVIVIGLSTYLADLWAKRTLQREQSALQAQLEEMKHELGLAKSSYDRYLDLVLEYYGVFY RHYRMCQRTANADAHRQPDGKITFTQDEFLANLDVFLVDWAAQEGEIRLLLPSKLLELHGEAIDCFNRFKHSVENFRKDD VTRKAKEDAFVQIESVKSRLEESLREFLRTEKLLK >Mature_194_residues TIEDGLTLIGAVAISFGGGAVIVIGLSTYLADLWAKRTLQREQSALQAQLEEMKHELGLAKSSYDRYLDLVLEYYGVFYR HYRMCQRTANADAHRQPDGKITFTQDEFLANLDVFLVDWAAQEGEIRLLLPSKLLELHGEAIDCFNRFKHSVENFRKDDV TRKAKEDAFVQIESVKSRLEESLREFLRTEKLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22420; Mature: 22289
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEDGLTLIGAVAISFGGGAVIVIGLSTYLADLWAKRTLQREQSALQAQLEEMKHELGL CCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AKSSYDRYLDLVLEYYGVFYRHYRMCQRTANADAHRQPDGKITFTQDEFLANLDVFLVDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHEEEE AAQEGEIRLLLPSKLLELHGEAIDCFNRFKHSVENFRKDDVTRKAKEDAFVQIESVKSRL CCCCCCEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESLREFLRTEKLLK HHHHHHHHHHHHHCC >Mature Secondary Structure TIEDGLTLIGAVAISFGGGAVIVIGLSTYLADLWAKRTLQREQSALQAQLEEMKHELGL CCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AKSSYDRYLDLVLEYYGVFYRHYRMCQRTANADAHRQPDGKITFTQDEFLANLDVFLVDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHEEEE AAQEGEIRLLLPSKLLELHGEAIDCFNRFKHSVENFRKDDVTRKAKEDAFVQIESVKSRL CCCCCCEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESLREFLRTEKLLK HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA