Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789961

Identifier: 91789961

GI number: 91789961

Start: 4327213

End: 4328196

Strand: Reverse

Name: 91789961

Synonym: Bpro_4122

Alternate gene names: NA

Gene position: 4328196-4327213 (Counterclockwise)

Preceding gene: 91789962

Following gene: 91789960

Centisome position: 83.23

GC content: 62.8

Gene sequence:

>984_bases
ATGAAATTTCTGCAGATCAAAACATTGACAGGCGCGGCCGCCGTGCTGCTGGCTTGCGCCATGCTCCCGGCGGCGGCACA
GACCTTTCCGGTCAAGCCGGTACGCGCCGTACTGCCGTATTCCGCCGGCAGCGGCCCGGACTCGGTGATGCGCAGCGTCG
GCGAAAAGCTCACGCGCGACTGGGGCCAGCAACTGCTCGTCGACAACAAGCCCGGCGCCAACGGCTGGCTGGCGATCGGC
GAAACCAAGCGTGCGCAGCCGGACGGTTACACGTTGATGACCGTGGATTCCACGCACATGACGCTGCAGCCGCACCTCTA
CAAGCAACTGCCGTTTGACCCGGCCAAGGATTTTGAACCGGTGGCGCCGCTGTACAGGACAAACTTCTTCATCGTCGTCG
GCGCCAACGCTCCGTGGAAAAACGTGACGGAACTGATCGCCGCAGCGAAAGCCAAAGACGGGCACCTGACCTACGGAAGC
TGGGGCATAGGCAGCGTGGCCCATGTCGGCACCGCCATGTTTGAGCATTCCACCGGCGCGAAGATGACGCACGTGCCCTT
CAAGGAGCTCCCCCAGCTTTACACCGCCGTGGCAACCGGCGAGGTGGACTGGGCTTTTGGTACCGCTGCGACCGTTGGCC
CTCTGTACAAGGCAAAGAAGGTCAGGCTGCTGGCTTATGCGGGGCACAACCGCATGGCAGGTTATACCGATGTGCCGACG
GTGGCTGAATCCGGTGGCCCGGCCGGTTTCGAGCTGCCGACCTGGGTGGCGATGTATGCCCCGAAAGGAACGCCCAAGCC
GGTGGTTGACCGGATCCAGTCCGGGGTGGCCAAGGCGCTGGCGGATGCCGACATCAAGGACAGGCTGGCGAATTTCGGTT
TTGAGCCCTGGATTGCGCCACCTTCGGATGTGACGAAGGCCGCTGAAGCCGACAAGCTCCGCTTCGCTGAAATCGTCAAG
CGCTCCAGAATTGCCCTCGACTGA

Upstream 100 bases:

>100_bases
CGCGGCCTTTGAAGCCCTTTGAAATCATTTGAAGTCATTTGAAGTTCATTTCCCCGCCACCCGATCACGCCCCCACCACG
AGACCCACGGAGACAACACC

Downstream 100 bases:

>100_bases
GCCCGGGCCAGGTCCTTCCTTTCATCCGGAGACAAAAATGACCATTCAAAATCGCAACATATTGTTTGCAGCGCGCGCAT
TGATGGCCCTCATCTTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKFLQIKTLTGAAAVLLACAMLPAAAQTFPVKPVRAVLPYSAGSGPDSVMRSVGEKLTRDWGQQLLVDNKPGANGWLAIG
ETKRAQPDGYTLMTVDSTHMTLQPHLYKQLPFDPAKDFEPVAPLYRTNFFIVVGANAPWKNVTELIAAAKAKDGHLTYGS
WGIGSVAHVGTAMFEHSTGAKMTHVPFKELPQLYTAVATGEVDWAFGTAATVGPLYKAKKVRLLAYAGHNRMAGYTDVPT
VAESGGPAGFELPTWVAMYAPKGTPKPVVDRIQSGVAKALADADIKDRLANFGFEPWIAPPSDVTKAAEADKLRFAEIVK
RSRIALD

Sequences:

>Translated_327_residues
MKFLQIKTLTGAAAVLLACAMLPAAAQTFPVKPVRAVLPYSAGSGPDSVMRSVGEKLTRDWGQQLLVDNKPGANGWLAIG
ETKRAQPDGYTLMTVDSTHMTLQPHLYKQLPFDPAKDFEPVAPLYRTNFFIVVGANAPWKNVTELIAAAKAKDGHLTYGS
WGIGSVAHVGTAMFEHSTGAKMTHVPFKELPQLYTAVATGEVDWAFGTAATVGPLYKAKKVRLLAYAGHNRMAGYTDVPT
VAESGGPAGFELPTWVAMYAPKGTPKPVVDRIQSGVAKALADADIKDRLANFGFEPWIAPPSDVTKAAEADKLRFAEIVK
RSRIALD
>Mature_327_residues
MKFLQIKTLTGAAAVLLACAMLPAAAQTFPVKPVRAVLPYSAGSGPDSVMRSVGEKLTRDWGQQLLVDNKPGANGWLAIG
ETKRAQPDGYTLMTVDSTHMTLQPHLYKQLPFDPAKDFEPVAPLYRTNFFIVVGANAPWKNVTELIAAAKAKDGHLTYGS
WGIGSVAHVGTAMFEHSTGAKMTHVPFKELPQLYTAVATGEVDWAFGTAATVGPLYKAKKVRLLAYAGHNRMAGYTDVPT
VAESGGPAGFELPTWVAMYAPKGTPKPVVDRIQSGVAKALADADIKDRLANFGFEPWIAPPSDVTKAAEADKLRFAEIVK
RSRIALD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35106; Mature: 35106

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLQIKTLTGAAAVLLACAMLPAAAQTFPVKPVRAVLPYSAGSGPDSVMRSVGEKLTRD
CCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHH
WGQQLLVDNKPGANGWLAIGETKRAQPDGYTLMTVDSTHMTLQPHLYKQLPFDPAKDFEP
HHHHEEECCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEECCHHHHHCCCCCCCCCCC
VAPLYRTNFFIVVGANAPWKNVTELIAAAKAKDGHLTYGSWGIGSVAHVGTAMFEHSTGA
CCHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCC
KMTHVPFKELPQLYTAVATGEVDWAFGTAATVGPLYKAKKVRLLAYAGHNRMAGYTDVPT
EEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCC
VAESGGPAGFELPTWVAMYAPKGTPKPVVDRIQSGVAKALADADIKDRLANFGFEPWIAP
HHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
PSDVTKAAEADKLRFAEIVKRSRIALD
CHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFLQIKTLTGAAAVLLACAMLPAAAQTFPVKPVRAVLPYSAGSGPDSVMRSVGEKLTRD
CCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHH
WGQQLLVDNKPGANGWLAIGETKRAQPDGYTLMTVDSTHMTLQPHLYKQLPFDPAKDFEP
HHHHEEECCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEECCHHHHHCCCCCCCCCCC
VAPLYRTNFFIVVGANAPWKNVTELIAAAKAKDGHLTYGSWGIGSVAHVGTAMFEHSTGA
CCHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCC
KMTHVPFKELPQLYTAVATGEVDWAFGTAATVGPLYKAKKVRLLAYAGHNRMAGYTDVPT
EEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCC
VAESGGPAGFELPTWVAMYAPKGTPKPVVDRIQSGVAKALADADIKDRLANFGFEPWIAP
HHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
PSDVTKAAEADKLRFAEIVKRSRIALD
CHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9583950; 12910271 [H]