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The map label for this gene is cydA [H]

Identifier: 91789956

GI number: 91789956

Start: 4323099

End: 4324499

Strand: Reverse

Name: cydA [H]

Synonym: Bpro_4117

Alternate gene names: 91789956

Gene position: 4324499-4323099 (Counterclockwise)

Preceding gene: 91789957

Following gene: 91789955

Centisome position: 83.16

GC content: 61.96

Gene sequence:

>1401_bases
ATGGAAGGACTTGACGCATTTCTTTTGGCCCGGATCCAGTTTGCAGCCAACATCACCTTCCATATCCTGTTCCCTACCAT
CAGCATTTCGCTGGGCTGGGTGCTGCTGTACTTCAAGCTGCGCTTCGTCAGGACGCAGGACCAGTACTGGATGGATGCCT
ACCAGTTCTGGGTGAAGATTTTTGCGCTGACGTTTGCGCTGGGCGTGGTGAGCGGCATCACCATGAGCTTCCAGTTCGGC
ACCAACTGGCCCGGCTACATGCAAAAGGTCGGCAACATCGCCGGGCCGTTGCTGGCCTACGAGGTGCTCACGGCGTTCTT
CCTCGAGGCCACGATGCTGGGGGTGATGCTGTTTGCGCGTGAGCGCGTCAGCGAAACCATGCACACCATCGCCACGCTGC
TGGTGGCCGGCGGCACCACGCTGTCGGCGTTCTGGATCCTGGCGCTCAATTCGTGGATGCAGACACCGGCCGGTTTTGAA
ATGATCAACGGGCAGGCGCATGTGACGAGCTGGCTGCAGGTGATCTTCAACCCGTCGTTTCCGTACCGCCTCACGCACAT
GCTGCTGGCCTCGGGCCTCACTGTGTCGTTTCTGGTGGCGGGTATTTCTGCCTACCGCTGGCTGCGCAACGAGCGCGGCG
CCGAGGTCATGGCCAGCCTGAAGACCGGCGTGTACCTCGCCGCCATCCTGATTCCGCTGCAGATTGTGGCGGGTGACTTT
CACGGCCTGAACACACTGGAATACCAGCCCGCCAAACTCGCCGCGATGGAAGGCATCTGGAAGACGGAGCGGGGCGTGGC
TGCGGTGCTGTTTGCGCTGCCTGATGCCGAGGCACGGGAAAACCGTTATGAAATTGCCATTCCGAAGTTGGCCTCGCTGT
ACCTGACCCATTCGCTGGACGGCGAAGTCAAGGGGCTCGACCAGTTCGAGGGCAAGCATCCGCCGGTGGCGCCGGTGTTC
TGGGCCTTTCGCATCATGGTGGGTGTGGGCATGCTGATGCTGGCCGTGAGCTGGGCGACTGTGTACCAGCTGGCACCGTG
GAAGAAAGACCCGGCACGCACCCTGACCCCATGGCACGCACGGGTGCTGGTGGCCATGACCTTTGCCGGCTGGGTAGCAC
TGGTGGCCGGCTGGTATGTCACCGAGATTGGCCGCCAGCCCTGGCTGGTCACGGGCGTGCTGACCGCGGCTGATGCCGCA
TCCAAAGTGCCGGCGCCACGGATTGCCTTCACCCTGTCGCTTTACCTCGCACTTTATGCCGCGCTGATCGCGGCCTATAT
CTCGGTGGTGTTTTACCTGGCGCGCCACAAGACCCATGCCGACCGGCCGTCTGGCGCCGGCATGGAAGACACCCTCAATC
CCGTGAGCTACCCGAAAAAGGAAGGAGCCGCCAATGCTTGA

Upstream 100 bases:

>100_bases
CAGGCCGGGCGGCATCAAGCACAGTGGCGGCGAAGTCTGACGGCCCGCCAGGGCCCGCAGCGCCGCCTGCCAACCTTGCC
GATAAAAACAGGAGTTGACA

Downstream 100 bases:

>100_bases
TCTTGCCCCTGATCTGACGCAGGCCGCAGGCTGGATGCCGATTGTTTTCCTGGTGGTGATGGGCCTGGCCATGCTGGCCT
ATGTGGTGCTGGACGGCTAT

Product: cytochrome bd ubiquinol oxidase subunit I

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MEGLDAFLLARIQFAANITFHILFPTISISLGWVLLYFKLRFVRTQDQYWMDAYQFWVKIFALTFALGVVSGITMSFQFG
TNWPGYMQKVGNIAGPLLAYEVLTAFFLEATMLGVMLFARERVSETMHTIATLLVAGGTTLSAFWILALNSWMQTPAGFE
MINGQAHVTSWLQVIFNPSFPYRLTHMLLASGLTVSFLVAGISAYRWLRNERGAEVMASLKTGVYLAAILIPLQIVAGDF
HGLNTLEYQPAKLAAMEGIWKTERGVAAVLFALPDAEARENRYEIAIPKLASLYLTHSLDGEVKGLDQFEGKHPPVAPVF
WAFRIMVGVGMLMLAVSWATVYQLAPWKKDPARTLTPWHARVLVAMTFAGWVALVAGWYVTEIGRQPWLVTGVLTAADAA
SKVPAPRIAFTLSLYLALYAALIAAYISVVFYLARHKTHADRPSGAGMEDTLNPVSYPKKEGAANA

Sequences:

>Translated_466_residues
MEGLDAFLLARIQFAANITFHILFPTISISLGWVLLYFKLRFVRTQDQYWMDAYQFWVKIFALTFALGVVSGITMSFQFG
TNWPGYMQKVGNIAGPLLAYEVLTAFFLEATMLGVMLFARERVSETMHTIATLLVAGGTTLSAFWILALNSWMQTPAGFE
MINGQAHVTSWLQVIFNPSFPYRLTHMLLASGLTVSFLVAGISAYRWLRNERGAEVMASLKTGVYLAAILIPLQIVAGDF
HGLNTLEYQPAKLAAMEGIWKTERGVAAVLFALPDAEARENRYEIAIPKLASLYLTHSLDGEVKGLDQFEGKHPPVAPVF
WAFRIMVGVGMLMLAVSWATVYQLAPWKKDPARTLTPWHARVLVAMTFAGWVALVAGWYVTEIGRQPWLVTGVLTAADAA
SKVPAPRIAFTLSLYLALYAALIAAYISVVFYLARHKTHADRPSGAGMEDTLNPVSYPKKEGAANA
>Mature_466_residues
MEGLDAFLLARIQFAANITFHILFPTISISLGWVLLYFKLRFVRTQDQYWMDAYQFWVKIFALTFALGVVSGITMSFQFG
TNWPGYMQKVGNIAGPLLAYEVLTAFFLEATMLGVMLFARERVSETMHTIATLLVAGGTTLSAFWILALNSWMQTPAGFE
MINGQAHVTSWLQVIFNPSFPYRLTHMLLASGLTVSFLVAGISAYRWLRNERGAEVMASLKTGVYLAAILIPLQIVAGDF
HGLNTLEYQPAKLAAMEGIWKTERGVAAVLFALPDAEARENRYEIAIPKLASLYLTHSLDGEVKGLDQFEGKHPPVAPVF
WAFRIMVGVGMLMLAVSWATVYQLAPWKKDPARTLTPWHARVLVAMTFAGWVALVAGWYVTEIGRQPWLVTGVLTAADAA
SKVPAPRIAFTLSLYLALYAALIAAYISVVFYLARHKTHADRPSGAGMEDTLNPVSYPKKEGAANA

Specific function: Cytochrome Oxidase Subunit. [C]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787212, Length=496, Percent_Identity=31.25, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI87081779, Length=497, Percent_Identity=30.9859154929577, Blast_Score=218, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 51534; Mature: 51534

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGLDAFLLARIQFAANITFHILFPTISISLGWVLLYFKLRFVRTQDQYWMDAYQFWVKI
CCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FALTFALGVVSGITMSFQFGTNWPGYMQKVGNIAGPLLAYEVLTAFFLEATMLGVMLFAR
HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVSETMHTIATLLVAGGTTLSAFWILALNSWMQTPAGFEMINGQAHVTSWLQVIFNPSF
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCC
PYRLTHMLLASGLTVSFLVAGISAYRWLRNERGAEVMASLKTGVYLAAILIPLQIVAGDF
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
HGLNTLEYQPAKLAAMEGIWKTERGVAAVLFALPDAEARENRYEIAIPKLASLYLTHSLD
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCEEEEHHHHHHHHHHHCCC
GEVKGLDQFEGKHPPVAPVFWAFRIMVGVGMLMLAVSWATVYQLAPWKKDPARTLTPWHA
CCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
RVLVAMTFAGWVALVAGWYVTEIGRQPWLVTGVLTAADAASKVPAPRIAFTLSLYLALYA
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ALIAAYISVVFYLARHKTHADRPSGAGMEDTLNPVSYPKKEGAANA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEGLDAFLLARIQFAANITFHILFPTISISLGWVLLYFKLRFVRTQDQYWMDAYQFWVKI
CCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FALTFALGVVSGITMSFQFGTNWPGYMQKVGNIAGPLLAYEVLTAFFLEATMLGVMLFAR
HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERVSETMHTIATLLVAGGTTLSAFWILALNSWMQTPAGFEMINGQAHVTSWLQVIFNPSF
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCC
PYRLTHMLLASGLTVSFLVAGISAYRWLRNERGAEVMASLKTGVYLAAILIPLQIVAGDF
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
HGLNTLEYQPAKLAAMEGIWKTERGVAAVLFALPDAEARENRYEIAIPKLASLYLTHSLD
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCEEEEHHHHHHHHHHHCCC
GEVKGLDQFEGKHPPVAPVFWAFRIMVGVGMLMLAVSWATVYQLAPWKKDPARTLTPWHA
CCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
RVLVAMTFAGWVALVAGWYVTEIGRQPWLVTGVLTAADAASKVPAPRIAFTLSLYLALYA
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ALIAAYISVVFYLARHKTHADRPSGAGMEDTLNPVSYPKKEGAANA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]