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The map label for this gene is glxA [H]

Identifier: 91789919

GI number: 91789919

Start: 4290524

End: 4291570

Strand: Reverse

Name: glxA [H]

Synonym: Bpro_4080

Alternate gene names: 91789919

Gene position: 4291570-4290524 (Counterclockwise)

Preceding gene: 91789921

Following gene: 91789912

Centisome position: 82.53

GC content: 68.96

Gene sequence:

>1047_bases
ATGTCATCCAAAGCGCCCAAAAAGACATTCGGCAAAGCCCCGGGCAAGGCCAGAGCCGGCAGCGCGGCCAGCCAGGCAGT
CGGCTCCGTAGTCGGGATCCGCACCGTTGCGGTGGTCGCCTTTGACGGCATCAGCCCCTTTCACCTGTCCGTGCCGTGCA
TGGTGTTCGGCAACGATTTTTCGGGTGCCGACCTGCCGCGGTTCAAGCTGCTGGTGTGCGCCGACAAGCCGGGCATGCTG
CAAACCACAGCCGGCTTCACCATTGCTGTGCAACACGGCCTGGGCGTGCTGGCCAAAGCCGATACCGTGGTGGTGCCGTC
ATGGCGCGACCCCATGGAGCGCCCGCCCGAGGCTTTGCTCAAGGCCCTGCAGGCGGCGCACCGGCGCGGCGCGCGCATCA
TCGGCTTATGCTTGGGCGCTTTTGTCCTGGCCGAGGCCGGCCTGCTGGACGGCCGGCCCGCCGCCACGCACTGGGCCCTG
GCGTCCGCTTTCGCCGCGCGTTACCCGCAGGTGCAGCTCCAGCCGGATGTGCTGTATGTGGACGACGGCGACGTGCTCAC
GTCTGCGGGCACCGCAGCCGCCATTGACTGCTGCCTGCATCTGCTGCGCCGCGAGCACGGTGCGGAGGTGGCCAATCGCG
TGGCGCGCCGCATGGTGGTGGCGCCACAGCGGCAGGGCGGGCAGGCCCAGTACGTCGAGCGGCCCGTGCCTGCCACCAGC
ACCGGCCACCGGCTTTCAGTCATTCTGGCCTGGGTGCAGGAAAACCTGAACCAGCCGCACAGCCTCGATGCGCTGGCCGA
TCGGGCCTTCATGAGCCGGCGCACCTTCACGCGGCACTTCCGGCAGATCACCGGCACCACGGTGGGCCGGTGGCTCACCG
GCCAGCGGCTGGCGCTGGCGCAGCGGCAACTGGAGGCCACCGACCGCTCGATGGACCAGATTGCCATCGATGCCGGCTTT
GGCTCCGTGGTGTCCCTGCGGCAGCACTTCGCGACGACGCTGGGCACATCGCCCTCCACCTACCGGCGTGAGTTTCGGGG
CAGGTAG

Upstream 100 bases:

>100_bases
TCCTTCAAAAGTTGAAACAGGTGGTTGATGGAGGTGATTGTTGGGCTGGCGGTGTTTTGGTGAAAGTGGCCCAAATGTCA
ATAGTCGATAGAATCGGGCC

Downstream 100 bases:

>100_bases
CAGTCTTTTTGGAAATGGCTGTGGGCCTATATATGACGGGACCTGACTGCTATAAAAACAGTAGCAATTGCGGCTTGTGC
CGCAGAAGACACTTGCTCGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSSKAPKKTFGKAPGKARAGSAASQAVGSVVGIRTVAVVAFDGISPFHLSVPCMVFGNDFSGADLPRFKLLVCADKPGML
QTTAGFTIAVQHGLGVLAKADTVVVPSWRDPMERPPEALLKALQAAHRRGARIIGLCLGAFVLAEAGLLDGRPAATHWAL
ASAFAARYPQVQLQPDVLYVDDGDVLTSAGTAAAIDCCLHLLRREHGAEVANRVARRMVVAPQRQGGQAQYVERPVPATS
TGHRLSVILAWVQENLNQPHSLDALADRAFMSRRTFTRHFRQITGTTVGRWLTGQRLALAQRQLEATDRSMDQIAIDAGF
GSVVSLRQHFATTLGTSPSTYRREFRGR

Sequences:

>Translated_348_residues
MSSKAPKKTFGKAPGKARAGSAASQAVGSVVGIRTVAVVAFDGISPFHLSVPCMVFGNDFSGADLPRFKLLVCADKPGML
QTTAGFTIAVQHGLGVLAKADTVVVPSWRDPMERPPEALLKALQAAHRRGARIIGLCLGAFVLAEAGLLDGRPAATHWAL
ASAFAARYPQVQLQPDVLYVDDGDVLTSAGTAAAIDCCLHLLRREHGAEVANRVARRMVVAPQRQGGQAQYVERPVPATS
TGHRLSVILAWVQENLNQPHSLDALADRAFMSRRTFTRHFRQITGTTVGRWLTGQRLALAQRQLEATDRSMDQIAIDAGF
GSVVSLRQHFATTLGTSPSTYRREFRGR
>Mature_347_residues
SSKAPKKTFGKAPGKARAGSAASQAVGSVVGIRTVAVVAFDGISPFHLSVPCMVFGNDFSGADLPRFKLLVCADKPGMLQ
TTAGFTIAVQHGLGVLAKADTVVVPSWRDPMERPPEALLKALQAAHRRGARIIGLCLGAFVLAEAGLLDGRPAATHWALA
SAFAARYPQVQLQPDVLYVDDGDVLTSAGTAAAIDCCLHLLRREHGAEVANRVARRMVVAPQRQGGQAQYVERPVPATST
GHRLSVILAWVQENLNQPHSLDALADRAFMSRRTFTRHFRQITGTTVGRWLTGQRLALAQRQLEATDRSMDQIAIDAGFG
SVVSLRQHFATTLGTSPSTYRREFRGR

Specific function: Transcriptional Activator Of The Superoxide Response Regulon Of E.Coli That Includes At Least 10 Genes Such As Soda, Nfo, Zwf And Micf. Binds The DNA Sequence 5'-Gcacn(7)Caa-3'. It Also Facilitates The Subsequent Binding Of RNA Polymerase To The Micf And

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790497, Length=98, Percent_Identity=31.6326530612245, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: 2500 (L-broth) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37409; Mature: 37278

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKAPKKTFGKAPGKARAGSAASQAVGSVVGIRTVAVVAFDGISPFHLSVPCMVFGNDF
CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEECCEEEECCCC
SGADLPRFKLLVCADKPGMLQTTAGFTIAVQHGLGVLAKADTVVVPSWRDPMERPPEALL
CCCCCCCEEEEEEECCCCCEEECCCEEEEEECCCCEEECCCEEEECCCCCCCCCCHHHHH
KALQAAHRRGARIIGLCLGAFVLAEAGLLDGRPAATHWALASAFAARYPQVQLQPDVLYV
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEEE
DDGDVLTSAGTAAAIDCCLHLLRREHGAEVANRVARRMVVAPQRQGGQAQYVERPVPATS
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCC
TGHRLSVILAWVQENLNQPHSLDALADRAFMSRRTFTRHFRQITGTTVGRWLTGQRLALA
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHH
QRQLEATDRSMDQIAIDAGFGSVVSLRQHFATTLGTSPSTYRREFRGR
HHHHHHHHCCHHHEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure 
SSKAPKKTFGKAPGKARAGSAASQAVGSVVGIRTVAVVAFDGISPFHLSVPCMVFGNDF
CCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEECCEEEECCCC
SGADLPRFKLLVCADKPGMLQTTAGFTIAVQHGLGVLAKADTVVVPSWRDPMERPPEALL
CCCCCCCEEEEEEECCCCCEEECCCEEEEEECCCCEEECCCEEEECCCCCCCCCCHHHHH
KALQAAHRRGARIIGLCLGAFVLAEAGLLDGRPAATHWALASAFAARYPQVQLQPDVLYV
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEEE
DDGDVLTSAGTAAAIDCCLHLLRREHGAEVANRVARRMVVAPQRQGGQAQYVERPVPATS
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCC
TGHRLSVILAWVQENLNQPHSLDALADRAFMSRRTFTRHFRQITGTTVGRWLTGQRLALA
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHH
QRQLEATDRSMDQIAIDAGFGSVVSLRQHFATTLGTSPSTYRREFRGR
HHHHHHHHCCHHHEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]