| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789913
Identifier: 91789913
GI number: 91789913
Start: 4282108
End: 4284636
Strand: Direct
Name: 91789913
Synonym: Bpro_4074
Alternate gene names: NA
Gene position: 4282108-4284636 (Clockwise)
Preceding gene: 91789911
Following gene: 91789914
Centisome position: 82.34
GC content: 68.8
Gene sequence:
>2529_bases ATGACACCATTTCCGGCTTTTTTACCAGGCCTGCGGCTCCAGCTTTCCCGCGCTTGCCGGAGGTTTCCGGCGCTTGTCGC GGCCGGGCTGCTGGCCATGCTGCAGGCCACAGCCTGGGCGCAGGCGCCCGGCTCATACATCGATCCGCCCGGCCGCGTGG CCCGGCTCAATCTGATGGAGGGTGCCGTGAGTTTTTCACCGGCCGACATCGCCGCTTCCCAGGACGCCAGCGCCTGGACG CCCGCCACGATGAACCGGCCGCTGACGCGTGGTGACCGCTTGTGGACGGGCCCGCGTGCGCGCGCCGAACTGCATATCGG TTCGACCGCCGTACGCATGAACGAGCAGACCAGCCTGGACTTCCTGGCGCTGGACGACGACGTGGTCCAGTTGCGCCTGG CCCAGGGCACCCTGAGGCTGCGCGTGCGCACCCTGTTTGAGGGCCAGCGCCTGGAGGTCAATACACCCAATGTGGCCTTC GTGATTTCGCAGCCGGGCGACTACCGGCTGGACGCCAACCTGGCCACCGACACCACACGCGTGGTGGTGCAGTCCGGCGG CGGCACCGTCTACGGCGACAGCGGCCTGCCTGTCACGCTGGCCAGCCAGCAGCAGGCCAGCTTCACCGGCACGCAGCTGA CGCCCGGGGCACCGGGCTCCACCGTGCTCGACAGCTTTGACCTCTGGGCTCTGGAGCGTGACCGGCTTGAAGACCAGTCG GTATCGGCGCGCTATGTGCCCCGCGAAGTCACCGGCTACCAGCAGCTCGACCTGTATGGCGACTGGAGCCAGGACCCGAC TTACGGTGCTGTCTGGCTGCCCCGCGTCGTGCCAGTGCACTGGGCGCCGTACCGCATGGGCTACTGGAGCTGGATAGCGC CCTGGGGCTGGACCTGGATTGACGACGCCCCCTGGGGATTTGCACCGTGTCACTATGGCCGCTGGGCGCTGATCGGTCAG CGCTGGGCCTGGGTGCCGGGCCGGCTGACAGCGCGCCCGGTGTACGCACCCGCACTGGTCGTCTTTGTGGGCGGCAGCAG CGGCGGTGTGAACTGGAGTATCTCCATCGGCTCGGGCGGGACGCTACAGCCCGCTCTAGGCTGGTTTCCGCTGGCCCCGG GCGAGGCATTCAGGCCGATTTACCGGGTGAGCCCGCGCTACGTGACGCAGGTGAACCAGAACATCGTGGTCAACACCACA GTCAACGTAACCAACATCTACCGCTACCAGCGCCAGCCCGCTGCCGTGACGGTGGTGAGTGCTGATGACTTTTCCCGCGG TCGGCCCGTGCGCGGCAACCCTGCGCTGAACCTGGCCGAGCTGAACCGGGCGCCGGTGGTGGTCGACCGCAGCGCAATAC CCCAGCGCCCCGACGTGCAGCGGCCCCGGCTTGCCGCAGCGGCTGCGCTGCCGCCCGCGCCGGTGGTCACGCAGCCCGTG GTACGCGGCCGGGAAGAGCGCCGCGAGGAGCGCCGGGACGAACGCCGCGACGGCAGGGCACAGCCTGCCTTGCCGGCGGC ACCGGCAACCCAGGGCTTGATCGGCGCGCAGCCGCCGGCACGACCCGGGCAGATCACCCCGCCCGCCTTGCAGGACCGCA GTACCGCCGACACAGAACAACGCGCCCGGCGCGAGCAGCAACAACTGCAACGTGACCAGGAACGCCAGCAGCGCGAAGCC GCACGGCCACAGGATACGCAGCGCCGGCCAGGCGAAGAGTCACTGATTCAGCGCGCCCAGCGTGAACGGCAGCAGGGCGG CATGCCCGCTGCCAGCCCGGACGCACGGACCGCGGCAGAACGCAATGCCATCGACACGGAGCAACGCGCCCGGCGCGAGC AGCAGCAACAACAACTGCAACGTGAGCAGGAACGCCAGCAGCGCGAAGCGGCACAGCAACAGGAGGCTCAGCGCCGGCAA AACGAAGAATCACTGATTCAGCGCGCTCAGCGTGAACGGGCCGCCGCAGCGGAACGCAGCGCCGTCGAACAGGCGCAGCG GGCACAACAGCAACTCCAGCGCGAGCAGGAGCGCCAGCAGCGCGAAGCGGCACAGCAACAGGAGGCGCAGCGCCGGCAAA ACGAAGAGTCGCTGATTCAGCGCGCCCAGCGTGAACGGGCCGCAGCAGCAGAACGCAGCGCCATCGAACAGGCGCAGCGG GCACAACAGCAACTCCAGCGCGAGCAGGAGCGGCAACAACGGGAGCTGATCCGCCAGCAGGACCAGCAGCGCCGGCAAAA CGAAGAGTTGCAGGGGCAACGCGCCCTGCGCGAGCAGGCGCAGCGGGCACAAGCAGCGCAAGCACAGGCACAGGCACAGG CACAGGCGCAGCAACGCGCACAGAGGGAGCAGCAACGCCAGGCCCACGAACTGCAGCAACAGCAACAGCAACAGCAACTG CAACAGCAGCAACTGCAGCAGCAGGAACAGCGCAAGGCCCAGCAACGGAAACAGGCACGTGAGGCGGACGCGGCCAACGC ACCCGCCCCCCGGCCGGAGGGCTTGCCCGGCCGGTTCCGGGAACAGTAA
Upstream 100 bases:
>100_bases GAGGGTCGTGCCTGCAAGCCCGCCAGGGGCGATACACGGTACCCATGCCACGAGCGGGTTTCCCCGTCGCGGCCATCACG ACAGGAAGAGAGTGCGCAAC
Downstream 100 bases:
>100_bases CCCACCGGCCTCATGATTCGTCACGGCCCTGGATTGCTCCAGCGTTAACAGCATCAAGCGGTCCTGCCCACCGGACCCGG GCCGCTTCCGGTTCAGGATT
Product: putative chromosome segregation ATPases
Products: NA
Alternate protein names: Prolin-Rich Exported Protein; Proline-Rich Transmembrane Protein; Chromosome Segregation ATPase; Proline-Rich Exported Protein; Chromosome Segregation ATPases
Number of amino acids: Translated: 842; Mature: 841
Protein sequence:
>842_residues MTPFPAFLPGLRLQLSRACRRFPALVAAGLLAMLQATAWAQAPGSYIDPPGRVARLNLMEGAVSFSPADIAASQDASAWT PATMNRPLTRGDRLWTGPRARAELHIGSTAVRMNEQTSLDFLALDDDVVQLRLAQGTLRLRVRTLFEGQRLEVNTPNVAF VISQPGDYRLDANLATDTTRVVVQSGGGTVYGDSGLPVTLASQQQASFTGTQLTPGAPGSTVLDSFDLWALERDRLEDQS VSARYVPREVTGYQQLDLYGDWSQDPTYGAVWLPRVVPVHWAPYRMGYWSWIAPWGWTWIDDAPWGFAPCHYGRWALIGQ RWAWVPGRLTARPVYAPALVVFVGGSSGGVNWSISIGSGGTLQPALGWFPLAPGEAFRPIYRVSPRYVTQVNQNIVVNTT VNVTNIYRYQRQPAAVTVVSADDFSRGRPVRGNPALNLAELNRAPVVVDRSAIPQRPDVQRPRLAAAAALPPAPVVTQPV VRGREERREERRDERRDGRAQPALPAAPATQGLIGAQPPARPGQITPPALQDRSTADTEQRARREQQQLQRDQERQQREA ARPQDTQRRPGEESLIQRAQRERQQGGMPAASPDARTAAERNAIDTEQRARREQQQQQLQREQERQQREAAQQQEAQRRQ NEESLIQRAQRERAAAAERSAVEQAQRAQQQLQREQERQQREAAQQQEAQRRQNEESLIQRAQRERAAAAERSAIEQAQR AQQQLQREQERQQRELIRQQDQQRRQNEELQGQRALREQAQRAQAAQAQAQAQAQAQQRAQREQQRQAHELQQQQQQQQL QQQQLQQQEQRKAQQRKQAREADAANAPAPRPEGLPGRFREQ
Sequences:
>Translated_842_residues MTPFPAFLPGLRLQLSRACRRFPALVAAGLLAMLQATAWAQAPGSYIDPPGRVARLNLMEGAVSFSPADIAASQDASAWT PATMNRPLTRGDRLWTGPRARAELHIGSTAVRMNEQTSLDFLALDDDVVQLRLAQGTLRLRVRTLFEGQRLEVNTPNVAF VISQPGDYRLDANLATDTTRVVVQSGGGTVYGDSGLPVTLASQQQASFTGTQLTPGAPGSTVLDSFDLWALERDRLEDQS VSARYVPREVTGYQQLDLYGDWSQDPTYGAVWLPRVVPVHWAPYRMGYWSWIAPWGWTWIDDAPWGFAPCHYGRWALIGQ RWAWVPGRLTARPVYAPALVVFVGGSSGGVNWSISIGSGGTLQPALGWFPLAPGEAFRPIYRVSPRYVTQVNQNIVVNTT VNVTNIYRYQRQPAAVTVVSADDFSRGRPVRGNPALNLAELNRAPVVVDRSAIPQRPDVQRPRLAAAAALPPAPVVTQPV VRGREERREERRDERRDGRAQPALPAAPATQGLIGAQPPARPGQITPPALQDRSTADTEQRARREQQQLQRDQERQQREA ARPQDTQRRPGEESLIQRAQRERQQGGMPAASPDARTAAERNAIDTEQRARREQQQQQLQREQERQQREAAQQQEAQRRQ NEESLIQRAQRERAAAAERSAVEQAQRAQQQLQREQERQQREAAQQQEAQRRQNEESLIQRAQRERAAAAERSAIEQAQR AQQQLQREQERQQRELIRQQDQQRRQNEELQGQRALREQAQRAQAAQAQAQAQAQAQQRAQREQQRQAHELQQQQQQQQL QQQQLQQQEQRKAQQRKQAREADAANAPAPRPEGLPGRFREQ >Mature_841_residues TPFPAFLPGLRLQLSRACRRFPALVAAGLLAMLQATAWAQAPGSYIDPPGRVARLNLMEGAVSFSPADIAASQDASAWTP ATMNRPLTRGDRLWTGPRARAELHIGSTAVRMNEQTSLDFLALDDDVVQLRLAQGTLRLRVRTLFEGQRLEVNTPNVAFV ISQPGDYRLDANLATDTTRVVVQSGGGTVYGDSGLPVTLASQQQASFTGTQLTPGAPGSTVLDSFDLWALERDRLEDQSV SARYVPREVTGYQQLDLYGDWSQDPTYGAVWLPRVVPVHWAPYRMGYWSWIAPWGWTWIDDAPWGFAPCHYGRWALIGQR WAWVPGRLTARPVYAPALVVFVGGSSGGVNWSISIGSGGTLQPALGWFPLAPGEAFRPIYRVSPRYVTQVNQNIVVNTTV NVTNIYRYQRQPAAVTVVSADDFSRGRPVRGNPALNLAELNRAPVVVDRSAIPQRPDVQRPRLAAAAALPPAPVVTQPVV RGREERREERRDERRDGRAQPALPAAPATQGLIGAQPPARPGQITPPALQDRSTADTEQRARREQQQLQRDQERQQREAA RPQDTQRRPGEESLIQRAQRERQQGGMPAASPDARTAAERNAIDTEQRARREQQQQQLQREQERQQREAAQQQEAQRRQN EESLIQRAQRERAAAAERSAVEQAQRAQQQLQREQERQQREAAQQQEAQRRQNEESLIQRAQRERAAAAERSAIEQAQRA QQQLQREQERQQRELIRQQDQQRRQNEELQGQRALREQAQRAQAAQAQAQAQAQAQQRAQREQQRQAHELQQQQQQQQLQ QQQLQQQEQRKAQQRKQAREADAANAPAPRPEGLPGRFREQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94874; Mature: 94743
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: PS00334 MYB_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFPAFLPGLRLQLSRACRRFPALVAAGLLAMLQATAWAQAPGSYIDPPGRVARLNLME CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHH GAVSFSPADIAASQDASAWTPATMNRPLTRGDRLWTGPRARAELHIGSTAVRMNEQTSLD CCCCCCCHHHCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCEEEEECCCEEEECCCCCCE FLALDDDVVQLRLAQGTLRLRVRTLFEGQRLEVNTPNVAFVISQPGDYRLDANLATDTTR EEEECCHHHHHHHHHCHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEECCCCCCCEE VVVQSGGGTVYGDSGLPVTLASQQQASFTGTQLTPGAPGSTVLDSFDLWALERDRLEDQS EEEECCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC VSARYVPREVTGYQQLDLYGDWSQDPTYGAVWLPRVVPVHWAPYRMGYWSWIAPWGWTWI CCCCCCCHHHCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCC DDAPWGFAPCHYGRWALIGQRWAWVPGRLTARPVYAPALVVFVGGSSGGVNWSISIGSGG CCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCC TLQPALGWFPLAPGEAFRPIYRVSPRYVTQVNQNIVVNTTVNVTNIYRYQRQPAAVTVVS CCCCCCCCEECCCCHHHCHHHHCCCHHHHHCCCCEEEEEEECHHHHHHHCCCCCEEEEEE ADDFSRGRPVRGNPALNLAELNRAPVVVDRSAIPQRPDVQRPRLAAAAALPPAPVVTQPV CCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCHH VRGREERREERRDERRDGRAQPALPAAPATQGLIGAQPPARPGQITPPALQDRSTADTEQ HCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RARREQQQLQRDQERQQREAARPQDTQRRPGEESLIQRAQRERQQGGMPAASPDARTAAE HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH RNAIDTEQRARREQQQQQLQREQERQQREAAQQQEAQRRQNEESLIQRAQRERAAAAERS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AVEQAQRAQQQLQREQERQQREAAQQQEAQRRQNEESLIQRAQRERAAAAERSAIEQAQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH AQQQLQREQERQQRELIRQQDQQRRQNEELQGQRALREQAQRAQAAQAQAQAQAQAQQRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QREQQRQAHELQQQQQQQQLQQQQLQQQEQRKAQQRKQAREADAANAPAPRPEGLPGRFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EQ CC >Mature Secondary Structure TPFPAFLPGLRLQLSRACRRFPALVAAGLLAMLQATAWAQAPGSYIDPPGRVARLNLME CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHH GAVSFSPADIAASQDASAWTPATMNRPLTRGDRLWTGPRARAELHIGSTAVRMNEQTSLD CCCCCCCHHHCCCCCCCCCCCHHCCCCCCCCCCEECCCCCCEEEEECCCEEEECCCCCCE FLALDDDVVQLRLAQGTLRLRVRTLFEGQRLEVNTPNVAFVISQPGDYRLDANLATDTTR EEEECCHHHHHHHHHCHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEECCCCCCCEE VVVQSGGGTVYGDSGLPVTLASQQQASFTGTQLTPGAPGSTVLDSFDLWALERDRLEDQS EEEECCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC VSARYVPREVTGYQQLDLYGDWSQDPTYGAVWLPRVVPVHWAPYRMGYWSWIAPWGWTWI CCCCCCCHHHCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCC DDAPWGFAPCHYGRWALIGQRWAWVPGRLTARPVYAPALVVFVGGSSGGVNWSISIGSGG CCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCC TLQPALGWFPLAPGEAFRPIYRVSPRYVTQVNQNIVVNTTVNVTNIYRYQRQPAAVTVVS CCCCCCCCEECCCCHHHCHHHHCCCHHHHHCCCCEEEEEEECHHHHHHHCCCCCEEEEEE ADDFSRGRPVRGNPALNLAELNRAPVVVDRSAIPQRPDVQRPRLAAAAALPPAPVVTQPV CCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCHH VRGREERREERRDERRDGRAQPALPAAPATQGLIGAQPPARPGQITPPALQDRSTADTEQ HCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RARREQQQLQRDQERQQREAARPQDTQRRPGEESLIQRAQRERQQGGMPAASPDARTAAE HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH RNAIDTEQRARREQQQQQLQREQERQQREAAQQQEAQRRQNEESLIQRAQRERAAAAERS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AVEQAQRAQQQLQREQERQQREAAQQQEAQRRQNEESLIQRAQRERAAAAERSAIEQAQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH AQQQLQREQERQQRELIRQQDQQRRQNEELQGQRALREQAQRAQAAQAQAQAQAQAQQRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QREQQRQAHELQQQQQQQQLQQQQLQQQEQRKAQQRKQAREADAANAPAPRPEGLPGRFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA