| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789906
Identifier: 91789906
GI number: 91789906
Start: 4275401
End: 4276309
Strand: Reverse
Name: 91789906
Synonym: Bpro_4067
Alternate gene names: NA
Gene position: 4276309-4275401 (Counterclockwise)
Preceding gene: 91789907
Following gene: 91789905
Centisome position: 82.23
GC content: 64.47
Gene sequence:
>909_bases ATGGATGCCCAACGCACGCAACTGGCCGATGGCCGCTGGCATTTCCAGCATGGCCCGATGGACATCATCATTGGCGCCAG CGGCAGCCCGGCATCATTGGAAATGGCCCATGCCGATGCGTGGAAACGCTTCACCGGCATCCTCGATGAATTGGTGCAGG AGCTGGCTGTTCTGCGGCGCCCGGTGCGCGGCGCTTGCCCGCTGCGGGGCCCCATCGCCCGGCGCATGTGGCATGCATGC CAGCCGTACCAAAGCCGTTTCATCACCCCGATGGCGGCGGTTGCCGGCGCGGTCGCGCAAGAGCTCGTTGCGTGTTACTC AAAAAGCGGCGTGACGCGGGCATGGATCAACAACGGAGGCGACATCGCCTTGCACCTTGCGCCATCGCAGTCGGTGCGAA TCGGTCTCTATGCCAATCTCGCCCGCCTGGATCTGGACGAAATTCGGGACGGCATCCGTACGGACGGTCAATTTGAGGTC GCCAGCGTGCTGCCGGTCCGCGGGGTCGCCACCAGCGGTTGGCGCGGCCGGAGTTTTTCACTGGGAATCGCCGACAGCGT CACGGTTCTGGCGCGCACGGCCTCCGAGGCCGATGCCGCTGCAACCGTCATTGCCAATGCCGTCGATGTGGCTGACGCGC GTATTGTGCGTCGACCCGCCTGCGAACTGAAGGACGACACCGACCTGGGCTCCATACCCGTCACGGTGGATGTTCCGCCG CTCGAGCCGACATTGGTGGAGCAGGCCTTGCGCGCGGGCCTGAGGCGGGCGCAGGAGTTGCGCGCCGCAGGGCTGATCTG GTCCGCCGCGCTGGTTTGCCAGGATCAGATAACGACCACAGGCAATACGGCCCTGGGATTGTTGGAAAACCGGCGAACCG ACATGCAGGTTGGTTCGGTATTTGCTTAA
Upstream 100 bases:
>100_bases CAACGAAGGTGCGCCCTCGGCGCGAGAGTGGGTGCAATTGTCCCCGGCCAATCCGTGGCCGCTGGCGCGACCCCCCTTGC TCGGCTGAAACGCAACAGCC
Downstream 100 bases:
>100_bases TGAAACAGATGGACTCAAAGCGATGATTGACATACGACGCATCTTTACGCACGTGGAGCAAATTCAGCACGAATTTGGTC CGGTGGCGCGAACGCCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: ApbE Family Lipoprotein
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MDAQRTQLADGRWHFQHGPMDIIIGASGSPASLEMAHADAWKRFTGILDELVQELAVLRRPVRGACPLRGPIARRMWHAC QPYQSRFITPMAAVAGAVAQELVACYSKSGVTRAWINNGGDIALHLAPSQSVRIGLYANLARLDLDEIRDGIRTDGQFEV ASVLPVRGVATSGWRGRSFSLGIADSVTVLARTASEADAAATVIANAVDVADARIVRRPACELKDDTDLGSIPVTVDVPP LEPTLVEQALRAGLRRAQELRAAGLIWSAALVCQDQITTTGNTALGLLENRRTDMQVGSVFA
Sequences:
>Translated_302_residues MDAQRTQLADGRWHFQHGPMDIIIGASGSPASLEMAHADAWKRFTGILDELVQELAVLRRPVRGACPLRGPIARRMWHAC QPYQSRFITPMAAVAGAVAQELVACYSKSGVTRAWINNGGDIALHLAPSQSVRIGLYANLARLDLDEIRDGIRTDGQFEV ASVLPVRGVATSGWRGRSFSLGIADSVTVLARTASEADAAATVIANAVDVADARIVRRPACELKDDTDLGSIPVTVDVPP LEPTLVEQALRAGLRRAQELRAAGLIWSAALVCQDQITTTGNTALGLLENRRTDMQVGSVFA >Mature_302_residues MDAQRTQLADGRWHFQHGPMDIIIGASGSPASLEMAHADAWKRFTGILDELVQELAVLRRPVRGACPLRGPIARRMWHAC QPYQSRFITPMAAVAGAVAQELVACYSKSGVTRAWINNGGDIALHLAPSQSVRIGLYANLARLDLDEIRDGIRTDGQFEV ASVLPVRGVATSGWRGRSFSLGIADSVTVLARTASEADAAATVIANAVDVADARIVRRPACELKDDTDLGSIPVTVDVPP LEPTLVEQALRAGLRRAQELRAAGLIWSAALVCQDQITTTGNTALGLLENRRTDMQVGSVFA
Specific function: Unknown
COG id: COG2122
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32394; Mature: 32394
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAQRTQLADGRWHFQHGPMDIIIGASGSPASLEMAHADAWKRFTGILDELVQELAVLRR CCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC PVRGACPLRGPIARRMWHACQPYQSRFITPMAAVAGAVAQELVACYSKSGVTRAWINNGG CCCCCCCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC DIALHLAPSQSVRIGLYANLARLDLDEIRDGIRTDGQFEVASVLPVRGVATSGWRGRSFS CEEEEECCCCCEEEEEEHHHHHCCHHHHHHHHCCCCCEEEEEECEECCCCCCCCCCCEEE LGIADSVTVLARTASEADAAATVIANAVDVADARIVRRPACELKDDTDLGSIPVTVDVPP ECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC LEPTLVEQALRAGLRRAQELRAAGLIWSAALVCQDQITTTGNTALGLLENRRTDMQVGSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCC FA CC >Mature Secondary Structure MDAQRTQLADGRWHFQHGPMDIIIGASGSPASLEMAHADAWKRFTGILDELVQELAVLRR CCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC PVRGACPLRGPIARRMWHACQPYQSRFITPMAAVAGAVAQELVACYSKSGVTRAWINNGG CCCCCCCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC DIALHLAPSQSVRIGLYANLARLDLDEIRDGIRTDGQFEVASVLPVRGVATSGWRGRSFS CEEEEECCCCCEEEEEEHHHHHCCHHHHHHHHCCCCCEEEEEECEECCCCCCCCCCCEEE LGIADSVTVLARTASEADAAATVIANAVDVADARIVRRPACELKDDTDLGSIPVTVDVPP ECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC LEPTLVEQALRAGLRRAQELRAAGLIWSAALVCQDQITTTGNTALGLLENRRTDMQVGSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCC FA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA