Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789906

Identifier: 91789906

GI number: 91789906

Start: 4275401

End: 4276309

Strand: Reverse

Name: 91789906

Synonym: Bpro_4067

Alternate gene names: NA

Gene position: 4276309-4275401 (Counterclockwise)

Preceding gene: 91789907

Following gene: 91789905

Centisome position: 82.23

GC content: 64.47

Gene sequence:

>909_bases
ATGGATGCCCAACGCACGCAACTGGCCGATGGCCGCTGGCATTTCCAGCATGGCCCGATGGACATCATCATTGGCGCCAG
CGGCAGCCCGGCATCATTGGAAATGGCCCATGCCGATGCGTGGAAACGCTTCACCGGCATCCTCGATGAATTGGTGCAGG
AGCTGGCTGTTCTGCGGCGCCCGGTGCGCGGCGCTTGCCCGCTGCGGGGCCCCATCGCCCGGCGCATGTGGCATGCATGC
CAGCCGTACCAAAGCCGTTTCATCACCCCGATGGCGGCGGTTGCCGGCGCGGTCGCGCAAGAGCTCGTTGCGTGTTACTC
AAAAAGCGGCGTGACGCGGGCATGGATCAACAACGGAGGCGACATCGCCTTGCACCTTGCGCCATCGCAGTCGGTGCGAA
TCGGTCTCTATGCCAATCTCGCCCGCCTGGATCTGGACGAAATTCGGGACGGCATCCGTACGGACGGTCAATTTGAGGTC
GCCAGCGTGCTGCCGGTCCGCGGGGTCGCCACCAGCGGTTGGCGCGGCCGGAGTTTTTCACTGGGAATCGCCGACAGCGT
CACGGTTCTGGCGCGCACGGCCTCCGAGGCCGATGCCGCTGCAACCGTCATTGCCAATGCCGTCGATGTGGCTGACGCGC
GTATTGTGCGTCGACCCGCCTGCGAACTGAAGGACGACACCGACCTGGGCTCCATACCCGTCACGGTGGATGTTCCGCCG
CTCGAGCCGACATTGGTGGAGCAGGCCTTGCGCGCGGGCCTGAGGCGGGCGCAGGAGTTGCGCGCCGCAGGGCTGATCTG
GTCCGCCGCGCTGGTTTGCCAGGATCAGATAACGACCACAGGCAATACGGCCCTGGGATTGTTGGAAAACCGGCGAACCG
ACATGCAGGTTGGTTCGGTATTTGCTTAA

Upstream 100 bases:

>100_bases
CAACGAAGGTGCGCCCTCGGCGCGAGAGTGGGTGCAATTGTCCCCGGCCAATCCGTGGCCGCTGGCGCGACCCCCCTTGC
TCGGCTGAAACGCAACAGCC

Downstream 100 bases:

>100_bases
TGAAACAGATGGACTCAAAGCGATGATTGACATACGACGCATCTTTACGCACGTGGAGCAAATTCAGCACGAATTTGGTC
CGGTGGCGCGAACGCCACTG

Product: hypothetical protein

Products: NA

Alternate protein names: ApbE Family Lipoprotein

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MDAQRTQLADGRWHFQHGPMDIIIGASGSPASLEMAHADAWKRFTGILDELVQELAVLRRPVRGACPLRGPIARRMWHAC
QPYQSRFITPMAAVAGAVAQELVACYSKSGVTRAWINNGGDIALHLAPSQSVRIGLYANLARLDLDEIRDGIRTDGQFEV
ASVLPVRGVATSGWRGRSFSLGIADSVTVLARTASEADAAATVIANAVDVADARIVRRPACELKDDTDLGSIPVTVDVPP
LEPTLVEQALRAGLRRAQELRAAGLIWSAALVCQDQITTTGNTALGLLENRRTDMQVGSVFA

Sequences:

>Translated_302_residues
MDAQRTQLADGRWHFQHGPMDIIIGASGSPASLEMAHADAWKRFTGILDELVQELAVLRRPVRGACPLRGPIARRMWHAC
QPYQSRFITPMAAVAGAVAQELVACYSKSGVTRAWINNGGDIALHLAPSQSVRIGLYANLARLDLDEIRDGIRTDGQFEV
ASVLPVRGVATSGWRGRSFSLGIADSVTVLARTASEADAAATVIANAVDVADARIVRRPACELKDDTDLGSIPVTVDVPP
LEPTLVEQALRAGLRRAQELRAAGLIWSAALVCQDQITTTGNTALGLLENRRTDMQVGSVFA
>Mature_302_residues
MDAQRTQLADGRWHFQHGPMDIIIGASGSPASLEMAHADAWKRFTGILDELVQELAVLRRPVRGACPLRGPIARRMWHAC
QPYQSRFITPMAAVAGAVAQELVACYSKSGVTRAWINNGGDIALHLAPSQSVRIGLYANLARLDLDEIRDGIRTDGQFEV
ASVLPVRGVATSGWRGRSFSLGIADSVTVLARTASEADAAATVIANAVDVADARIVRRPACELKDDTDLGSIPVTVDVPP
LEPTLVEQALRAGLRRAQELRAAGLIWSAALVCQDQITTTGNTALGLLENRRTDMQVGSVFA

Specific function: Unknown

COG id: COG2122

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32394; Mature: 32394

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAQRTQLADGRWHFQHGPMDIIIGASGSPASLEMAHADAWKRFTGILDELVQELAVLRR
CCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
PVRGACPLRGPIARRMWHACQPYQSRFITPMAAVAGAVAQELVACYSKSGVTRAWINNGG
CCCCCCCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
DIALHLAPSQSVRIGLYANLARLDLDEIRDGIRTDGQFEVASVLPVRGVATSGWRGRSFS
CEEEEECCCCCEEEEEEHHHHHCCHHHHHHHHCCCCCEEEEEECEECCCCCCCCCCCEEE
LGIADSVTVLARTASEADAAATVIANAVDVADARIVRRPACELKDDTDLGSIPVTVDVPP
ECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC
LEPTLVEQALRAGLRRAQELRAAGLIWSAALVCQDQITTTGNTALGLLENRRTDMQVGSV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCC
FA
CC
>Mature Secondary Structure
MDAQRTQLADGRWHFQHGPMDIIIGASGSPASLEMAHADAWKRFTGILDELVQELAVLRR
CCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
PVRGACPLRGPIARRMWHACQPYQSRFITPMAAVAGAVAQELVACYSKSGVTRAWINNGG
CCCCCCCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
DIALHLAPSQSVRIGLYANLARLDLDEIRDGIRTDGQFEVASVLPVRGVATSGWRGRSFS
CEEEEECCCCCEEEEEEHHHHHCCHHHHHHHHCCCCCEEEEEECEECCCCCCCCCCCEEE
LGIADSVTVLARTASEADAAATVIANAVDVADARIVRRPACELKDDTDLGSIPVTVDVPP
ECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC
LEPTLVEQALRAGLRRAQELRAAGLIWSAALVCQDQITTTGNTALGLLENRRTDMQVGSV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCC
FA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA