Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789870

Identifier: 91789870

GI number: 91789870

Start: 4230291

End: 4231157

Strand: Reverse

Name: 91789870

Synonym: Bpro_4030

Alternate gene names: NA

Gene position: 4231157-4230291 (Counterclockwise)

Preceding gene: 91789871

Following gene: 91789869

Centisome position: 81.36

GC content: 64.24

Gene sequence:

>867_bases
ATGTCTTCTCTCCCCTCATCCCTGCTTGCGCTGATCAGGCTCATTCGGCCGCACCAGTGGCTTAAAAACGGCTTTGTGTT
TGCCGGCCTGGTGTTCAGCCAGGCCTGGCAGGACGGCCCCCTCGTCGGGCGCGTCCTGCATGCCTTTGCCGCGTTTTGCT
GCGTCTCCAGCATGGTCTACATCGTTAACGACTGGCATGACCGCGCCAGCGATGCCCTGCACCCCGAAAAAAGCCGCCGG
CCGCTGGCCAGCGGCAGGGTTTCCGTCCCCGTGGCGCTGGTGCTGGCGGGCCTGCTGCTGGCCAGCGGCCTGCTGCTGGC
CGCCGGCAACCGCACCCTGCTCGCGCTGCTCGGGGCCTATGTGGTGTTCAATCTGGCCTATTCCTGGCGTCTCAAGCAGG
TGCCGGTGGTGGATGTGTCCATCATTGCATCGGGTTTTATGCTCAGGCTGCTGGCGGGTACCGTGGCCGTCGGGATCCCG
CCTTCGCGCTGGCTGTTGCTGACCGGCATTTTTGTCGCGCTTTTCCTGGGCTTTTCCAAACGCAAGGCCGAGACCTTTCA
TGAGGAAGCCAGCCAGCGCGCCGTGCTGGCGCATTACCCGTCGGCTCTGCTCGATACCTTCATGGCCGTGACCATGACCG
CCACACTGACCAACTACAGCCTGTTTGCCACCAGCCCCGAGGCCCAGTTGCAGCACGGCGAGCGCCTGCTCTACACCGTG
CCGGTGGTTATTTTTGGCATGCTGCGCTACACCTACCAGGTGCACCGTGGCCGCGGCGAAGACGTCGCGCGCGACCTGCT
GAGCGACCCATGGATTCTGGCGGCCGGCGTGTTGTGGATGGCCATCTTTCTGGGCCACCGGCTGTGA

Upstream 100 bases:

>100_bases
CTCTGGCCTGGTTTTCAGCCCATCCAGAGAAATAAAGAGCCGGCCCACTCAGTTATGCTTGAACGTCGTCCCCAGACCGG
AGGCTTTCCCTCCCATATTG

Downstream 100 bases:

>100_bases
CACCCGAGGACGCGCCGGCGGCGGGCGCTTCGCCTGTCGGCGGGCCGGGTTCACGGCCACTTCGCCTGCCTGTCAAACAA
CTGCTGCTGGTGCTGGGTGT

Product: UbiA prenyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSSLPSSLLALIRLIRPHQWLKNGFVFAGLVFSQAWQDGPLVGRVLHAFAAFCCVSSMVYIVNDWHDRASDALHPEKSRR
PLASGRVSVPVALVLAGLLLASGLLLAAGNRTLLALLGAYVVFNLAYSWRLKQVPVVDVSIIASGFMLRLLAGTVAVGIP
PSRWLLLTGIFVALFLGFSKRKAETFHEEASQRAVLAHYPSALLDTFMAVTMTATLTNYSLFATSPEAQLQHGERLLYTV
PVVIFGMLRYTYQVHRGRGEDVARDLLSDPWILAAGVLWMAIFLGHRL

Sequences:

>Translated_288_residues
MSSLPSSLLALIRLIRPHQWLKNGFVFAGLVFSQAWQDGPLVGRVLHAFAAFCCVSSMVYIVNDWHDRASDALHPEKSRR
PLASGRVSVPVALVLAGLLLASGLLLAAGNRTLLALLGAYVVFNLAYSWRLKQVPVVDVSIIASGFMLRLLAGTVAVGIP
PSRWLLLTGIFVALFLGFSKRKAETFHEEASQRAVLAHYPSALLDTFMAVTMTATLTNYSLFATSPEAQLQHGERLLYTV
PVVIFGMLRYTYQVHRGRGEDVARDLLSDPWILAAGVLWMAIFLGHRL
>Mature_287_residues
SSLPSSLLALIRLIRPHQWLKNGFVFAGLVFSQAWQDGPLVGRVLHAFAAFCCVSSMVYIVNDWHDRASDALHPEKSRRP
LASGRVSVPVALVLAGLLLASGLLLAAGNRTLLALLGAYVVFNLAYSWRLKQVPVVDVSIIASGFMLRLLAGTVAVGIPP
SRWLLLTGIFVALFLGFSKRKAETFHEEASQRAVLAHYPSALLDTFMAVTMTATLTNYSLFATSPEAQLQHGERLLYTVP
VVIFGMLRYTYQVHRGRGEDVARDLLSDPWILAAGVLWMAIFLGHRL

Specific function: Possible permease/transporter [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 31626; Mature: 31494

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLPSSLLALIRLIRPHQWLKNGFVFAGLVFSQAWQDGPLVGRVLHAFAAFCCVSSMVY
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
IVNDWHDRASDALHPEKSRRPLASGRVSVPVALVLAGLLLASGLLLAAGNRTLLALLGAY
HHHCHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH
VVFNLAYSWRLKQVPVVDVSIIASGFMLRLLAGTVAVGIPPSRWLLLTGIFVALFLGFSK
HHHHHHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH
RKAETFHEEASQRAVLAHYPSALLDTFMAVTMTATLTNYSLFATSPEAQLQHGERLLYTV
HHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCHHHHHH
PVVIFGMLRYTYQVHRGRGEDVARDLLSDPWILAAGVLWMAIFLGHRL
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSLPSSLLALIRLIRPHQWLKNGFVFAGLVFSQAWQDGPLVGRVLHAFAAFCCVSSMVY
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
IVNDWHDRASDALHPEKSRRPLASGRVSVPVALVLAGLLLASGLLLAAGNRTLLALLGAY
HHHCHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH
VVFNLAYSWRLKQVPVVDVSIIASGFMLRLLAGTVAVGIPPSRWLLLTGIFVALFLGFSK
HHHHHHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH
RKAETFHEEASQRAVLAHYPSALLDTFMAVTMTATLTNYSLFATSPEAQLQHGERLLYTV
HHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCHHHHHH
PVVIFGMLRYTYQVHRGRGEDVARDLLSDPWILAAGVLWMAIFLGHRL
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]