| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789870
Identifier: 91789870
GI number: 91789870
Start: 4230291
End: 4231157
Strand: Reverse
Name: 91789870
Synonym: Bpro_4030
Alternate gene names: NA
Gene position: 4231157-4230291 (Counterclockwise)
Preceding gene: 91789871
Following gene: 91789869
Centisome position: 81.36
GC content: 64.24
Gene sequence:
>867_bases ATGTCTTCTCTCCCCTCATCCCTGCTTGCGCTGATCAGGCTCATTCGGCCGCACCAGTGGCTTAAAAACGGCTTTGTGTT TGCCGGCCTGGTGTTCAGCCAGGCCTGGCAGGACGGCCCCCTCGTCGGGCGCGTCCTGCATGCCTTTGCCGCGTTTTGCT GCGTCTCCAGCATGGTCTACATCGTTAACGACTGGCATGACCGCGCCAGCGATGCCCTGCACCCCGAAAAAAGCCGCCGG CCGCTGGCCAGCGGCAGGGTTTCCGTCCCCGTGGCGCTGGTGCTGGCGGGCCTGCTGCTGGCCAGCGGCCTGCTGCTGGC CGCCGGCAACCGCACCCTGCTCGCGCTGCTCGGGGCCTATGTGGTGTTCAATCTGGCCTATTCCTGGCGTCTCAAGCAGG TGCCGGTGGTGGATGTGTCCATCATTGCATCGGGTTTTATGCTCAGGCTGCTGGCGGGTACCGTGGCCGTCGGGATCCCG CCTTCGCGCTGGCTGTTGCTGACCGGCATTTTTGTCGCGCTTTTCCTGGGCTTTTCCAAACGCAAGGCCGAGACCTTTCA TGAGGAAGCCAGCCAGCGCGCCGTGCTGGCGCATTACCCGTCGGCTCTGCTCGATACCTTCATGGCCGTGACCATGACCG CCACACTGACCAACTACAGCCTGTTTGCCACCAGCCCCGAGGCCCAGTTGCAGCACGGCGAGCGCCTGCTCTACACCGTG CCGGTGGTTATTTTTGGCATGCTGCGCTACACCTACCAGGTGCACCGTGGCCGCGGCGAAGACGTCGCGCGCGACCTGCT GAGCGACCCATGGATTCTGGCGGCCGGCGTGTTGTGGATGGCCATCTTTCTGGGCCACCGGCTGTGA
Upstream 100 bases:
>100_bases CTCTGGCCTGGTTTTCAGCCCATCCAGAGAAATAAAGAGCCGGCCCACTCAGTTATGCTTGAACGTCGTCCCCAGACCGG AGGCTTTCCCTCCCATATTG
Downstream 100 bases:
>100_bases CACCCGAGGACGCGCCGGCGGCGGGCGCTTCGCCTGTCGGCGGGCCGGGTTCACGGCCACTTCGCCTGCCTGTCAAACAA CTGCTGCTGGTGCTGGGTGT
Product: UbiA prenyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSSLPSSLLALIRLIRPHQWLKNGFVFAGLVFSQAWQDGPLVGRVLHAFAAFCCVSSMVYIVNDWHDRASDALHPEKSRR PLASGRVSVPVALVLAGLLLASGLLLAAGNRTLLALLGAYVVFNLAYSWRLKQVPVVDVSIIASGFMLRLLAGTVAVGIP PSRWLLLTGIFVALFLGFSKRKAETFHEEASQRAVLAHYPSALLDTFMAVTMTATLTNYSLFATSPEAQLQHGERLLYTV PVVIFGMLRYTYQVHRGRGEDVARDLLSDPWILAAGVLWMAIFLGHRL
Sequences:
>Translated_288_residues MSSLPSSLLALIRLIRPHQWLKNGFVFAGLVFSQAWQDGPLVGRVLHAFAAFCCVSSMVYIVNDWHDRASDALHPEKSRR PLASGRVSVPVALVLAGLLLASGLLLAAGNRTLLALLGAYVVFNLAYSWRLKQVPVVDVSIIASGFMLRLLAGTVAVGIP PSRWLLLTGIFVALFLGFSKRKAETFHEEASQRAVLAHYPSALLDTFMAVTMTATLTNYSLFATSPEAQLQHGERLLYTV PVVIFGMLRYTYQVHRGRGEDVARDLLSDPWILAAGVLWMAIFLGHRL >Mature_287_residues SSLPSSLLALIRLIRPHQWLKNGFVFAGLVFSQAWQDGPLVGRVLHAFAAFCCVSSMVYIVNDWHDRASDALHPEKSRRP LASGRVSVPVALVLAGLLLASGLLLAAGNRTLLALLGAYVVFNLAYSWRLKQVPVVDVSIIASGFMLRLLAGTVAVGIPP SRWLLLTGIFVALFLGFSKRKAETFHEEASQRAVLAHYPSALLDTFMAVTMTATLTNYSLFATSPEAQLQHGERLLYTVP VVIFGMLRYTYQVHRGRGEDVARDLLSDPWILAAGVLWMAIFLGHRL
Specific function: Possible permease/transporter [H]
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: NA
Molecular weight: Translated: 31626; Mature: 31494
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPSSLLALIRLIRPHQWLKNGFVFAGLVFSQAWQDGPLVGRVLHAFAAFCCVSSMVY CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IVNDWHDRASDALHPEKSRRPLASGRVSVPVALVLAGLLLASGLLLAAGNRTLLALLGAY HHHCHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH VVFNLAYSWRLKQVPVVDVSIIASGFMLRLLAGTVAVGIPPSRWLLLTGIFVALFLGFSK HHHHHHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH RKAETFHEEASQRAVLAHYPSALLDTFMAVTMTATLTNYSLFATSPEAQLQHGERLLYTV HHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCHHHHHH PVVIFGMLRYTYQVHRGRGEDVARDLLSDPWILAAGVLWMAIFLGHRL HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSLPSSLLALIRLIRPHQWLKNGFVFAGLVFSQAWQDGPLVGRVLHAFAAFCCVSSMVY CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IVNDWHDRASDALHPEKSRRPLASGRVSVPVALVLAGLLLASGLLLAAGNRTLLALLGAY HHHCHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH VVFNLAYSWRLKQVPVVDVSIIASGFMLRLLAGTVAVGIPPSRWLLLTGIFVALFLGFSK HHHHHHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH RKAETFHEEASQRAVLAHYPSALLDTFMAVTMTATLTNYSLFATSPEAQLQHGERLLYTV HHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCHHHHHH PVVIFGMLRYTYQVHRGRGEDVARDLLSDPWILAAGVLWMAIFLGHRL HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]