| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789834
Identifier: 91789834
GI number: 91789834
Start: 4189165
End: 4189935
Strand: Reverse
Name: 91789834
Synonym: Bpro_3994
Alternate gene names: NA
Gene position: 4189935-4189165 (Counterclockwise)
Preceding gene: 91789835
Following gene: 91789833
Centisome position: 80.57
GC content: 41.37
Gene sequence:
>771_bases ATGAATGATGCAAAACACGTAAAGCAAGGTCCTATTTACTATTCGCAGTTCGGCGAAGATAAAATTCTTTCAAAAATCTT TAGTCAGGTAGATAAAGGTTTATGCATTGAGGTAGGGGCAAATGATGGGGTTAATGACAGCACATCGTTGTTTTTTGAAA AGCTTGGTTGGAGTTGTATTCTGATTGAGCCCAACCCCGTGCTGTGTCAATCAATTCGCAATTCAAGAGACGCTAAGCTT GTGGAATTGGCTGCTTCCGATCGGGAGGGCGAGGCTATTCTTCATGTGGCTAGTGGCGCGGAGAGGGCACATGGAGTGTC CACAATAAGCTCCGAACAAGAGGCGCTAGAAAAAATCAGGTTGTATGGATTCACGTATGAGGATGTGAAGGTTAAAACCC AGACACTCGATAAAATACTGGAAGATCTGAAGATAGATGGTGTAATCCATTTTATTTCCATTGATGTGGAAGGGCATGAA GTGGCGGTGCTGAATGGATTTTCAATTGAAAATTGGCGACCAACAATAATTATATTGGAGGATAATTCGAATTTTGAAGA TATTAGAGTTTGTAACTATCTGAGAAAATTCGGCTACATCCCATTTATGCGAACTGGAGTAAATGACTGGTACGCGCATG GAGGCAATAGGGCACTTGTGACCTTGCGAAGCAGGATTAAATATAATCTGACTTCGATAAAAGAGCGGGTCAAGTCTCGT ATAAAACGCATTCCCGGCGTTATGGTCTTCAAGAAATTGATACTAAATTAA
Upstream 100 bases:
>100_bases CGTTATTTCCATTTTTACTCTGCCAGAAAAATCGAAGACTATTTTTTTTGGTATATTCAAAAAAACTTGAAGAGAAAATC AAGAGAGGCAATGCCACTTC
Downstream 100 bases:
>100_bases CCGCTCAGGCTGCACCCGTCTTGGATTGATGCGGCTGGCCATCAATAATTAATTCGCGACCTCATGTCTGCTGCGACGAG CCCCTCATATCAATAGAAAC
Product: methyltransferase FkbM
Products: NA
Alternate protein names: Methyltransferase FkbM; FkbM Family Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase Fkbm Family; Methyltransferase FkbM Family Protein; Methyltransferase FkbM Family Domain Protein; Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MNDAKHVKQGPIYYSQFGEDKILSKIFSQVDKGLCIEVGANDGVNDSTSLFFEKLGWSCILIEPNPVLCQSIRNSRDAKL VELAASDREGEAILHVASGAERAHGVSTISSEQEALEKIRLYGFTYEDVKVKTQTLDKILEDLKIDGVIHFISIDVEGHE VAVLNGFSIENWRPTIIILEDNSNFEDIRVCNYLRKFGYIPFMRTGVNDWYAHGGNRALVTLRSRIKYNLTSIKERVKSR IKRIPGVMVFKKLILN
Sequences:
>Translated_256_residues MNDAKHVKQGPIYYSQFGEDKILSKIFSQVDKGLCIEVGANDGVNDSTSLFFEKLGWSCILIEPNPVLCQSIRNSRDAKL VELAASDREGEAILHVASGAERAHGVSTISSEQEALEKIRLYGFTYEDVKVKTQTLDKILEDLKIDGVIHFISIDVEGHE VAVLNGFSIENWRPTIIILEDNSNFEDIRVCNYLRKFGYIPFMRTGVNDWYAHGGNRALVTLRSRIKYNLTSIKERVKSR IKRIPGVMVFKKLILN >Mature_256_residues MNDAKHVKQGPIYYSQFGEDKILSKIFSQVDKGLCIEVGANDGVNDSTSLFFEKLGWSCILIEPNPVLCQSIRNSRDAKL VELAASDREGEAILHVASGAERAHGVSTISSEQEALEKIRLYGFTYEDVKVKTQTLDKILEDLKIDGVIHFISIDVEGHE VAVLNGFSIENWRPTIIILEDNSNFEDIRVCNYLRKFGYIPFMRTGVNDWYAHGGNRALVTLRSRIKYNLTSIKERVKSR IKRIPGVMVFKKLILN
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28967; Mature: 28967
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDAKHVKQGPIYYSQFGEDKILSKIFSQVDKGLCIEVGANDGVNDSTSLFFEKLGWSCI CCCCHHCCCCCEEHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCEEE LIEPNPVLCQSIRNSRDAKLVELAASDREGEAILHVASGAERAHGVSTISSEQEALEKIR EECCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCHHCCCHHHHHHHHHHHHHH LYGFTYEDVKVKTQTLDKILEDLKIDGVIHFISIDVEGHEVAVLNGFSIENWRPTIIILE HHCCEEHHHEEHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCEECCCCCEEEEEE DNSNFEDIRVCNYLRKFGYIPFMRTGVNDWYAHGGNRALVTLRSRIKYNLTSIKERVKSR CCCCCCHHHHHHHHHHHCCCCEECCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHH IKRIPGVMVFKKLILN HHHCCHHHHHHHHHCC >Mature Secondary Structure MNDAKHVKQGPIYYSQFGEDKILSKIFSQVDKGLCIEVGANDGVNDSTSLFFEKLGWSCI CCCCHHCCCCCEEHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCEEE LIEPNPVLCQSIRNSRDAKLVELAASDREGEAILHVASGAERAHGVSTISSEQEALEKIR EECCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCHHCCCHHHHHHHHHHHHHH LYGFTYEDVKVKTQTLDKILEDLKIDGVIHFISIDVEGHEVAVLNGFSIENWRPTIIILE HHCCEEHHHEEHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCEECCCCCEEEEEE DNSNFEDIRVCNYLRKFGYIPFMRTGVNDWYAHGGNRALVTLRSRIKYNLTSIKERVKSR CCCCCCHHHHHHHHHHHCCCCEECCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHH IKRIPGVMVFKKLILN HHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA