| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789778
Identifier: 91789778
GI number: 91789778
Start: 4128216
End: 4128839
Strand: Reverse
Name: 91789778
Synonym: Bpro_3938
Alternate gene names: NA
Gene position: 4128839-4128216 (Counterclockwise)
Preceding gene: 91789779
Following gene: 91789777
Centisome position: 79.4
GC content: 58.17
Gene sequence:
>624_bases ATGCATTCGCTGCAACCATCATTTGAGCGCGCCTGGCGCGACATTGGCGCCCAGTCCGGCGGCGCATCGTTGTTCGAGGC GCTTGCTGCCGCCTATTCCGAGTCGCATCGCAAGTACCACACGCTCCAGCATCTCACCGAGTGCCTGCAGACGTTCGAAG CAGTTCGTCCGCTTGCGCAAAGACCTGCGGAAGTTGAACTTGCGCTGTGGTTCCATGATGCCATTTACGACGTCAAGCGT GGCGACAACGAAGCGCAAAGTGCTGACTGGTCCATGCGGGAACTTGAGGCGGCATCGGTGCCACCGGACGCAGTCAATCG CGTGCACGATCTTGTCATGGCCACACGGCACACAGAGGTTCCAACCTATGGTGACCAGCAACTGCTTGTCGATGTGGATC TGTCCATTCTCGGAGCGCCAGACGAGCGATTCAAAGAGTATGAGCGGCAGATTCGGGACGAATACTCCTTCGTTCCGGGC TGGATATTCAGGCGCAAGCGTCGTGCGATCTTGAAGTCATTCCTGGACAGACGGCGCATCTACAGCACAGACCACTTCCA CTTGACCCTGGAGCAGCGAGCCCGTGAGAATCTCTCTCGTGCCAATTCCGGGAATGCGGGCTAG
Upstream 100 bases:
>100_bases AAGTGGAGGGCAACGGCTTTCATGAATAACGGGTTTAACTGGTCATTCGCGTGCCGACCGCGTTCGGCGTCTGCTCAATT TCGGCATCAGGCCGCACCAA
Downstream 100 bases:
>100_bases CTCCAATACGGTGCAGTTAAGCCCTTGCCCCTGGTTTGTCATCCCGGACTTGATCCGGGATCCATGGATTGCGGGTCAGG CCCGCAATGACAAGTCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MHSLQPSFERAWRDIGAQSGGASLFEALAAAYSESHRKYHTLQHLTECLQTFEAVRPLAQRPAEVELALWFHDAIYDVKR GDNEAQSADWSMRELEAASVPPDAVNRVHDLVMATRHTEVPTYGDQQLLVDVDLSILGAPDERFKEYERQIRDEYSFVPG WIFRRKRRAILKSFLDRRRIYSTDHFHLTLEQRARENLSRANSGNAG
Sequences:
>Translated_207_residues MHSLQPSFERAWRDIGAQSGGASLFEALAAAYSESHRKYHTLQHLTECLQTFEAVRPLAQRPAEVELALWFHDAIYDVKR GDNEAQSADWSMRELEAASVPPDAVNRVHDLVMATRHTEVPTYGDQQLLVDVDLSILGAPDERFKEYERQIRDEYSFVPG WIFRRKRRAILKSFLDRRRIYSTDHFHLTLEQRARENLSRANSGNAG >Mature_207_residues MHSLQPSFERAWRDIGAQSGGASLFEALAAAYSESHRKYHTLQHLTECLQTFEAVRPLAQRPAEVELALWFHDAIYDVKR GDNEAQSADWSMRELEAASVPPDAVNRVHDLVMATRHTEVPTYGDQQLLVDVDLSILGAPDERFKEYERQIRDEYSFVPG WIFRRKRRAILKSFLDRRRIYSTDHFHLTLEQRARENLSRANSGNAG
Specific function: Unknown
COG id: COG4339
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23882; Mature: 23882
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSLQPSFERAWRDIGAQSGGASLFEALAAAYSESHRKYHTLQHLTECLQTFEAVRPLAQ CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPAEVELALWFHDAIYDVKRGDNEAQSADWSMRELEAASVPPDAVNRVHDLVMATRHTEV CCCCEEHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PTYGDQQLLVDVDLSILGAPDERFKEYERQIRDEYSFVPGWIFRRKRRAILKSFLDRRRI CCCCCCEEEEEECHHEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH YSTDHFHLTLEQRARENLSRANSGNAG CCCCCEEEEHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHSLQPSFERAWRDIGAQSGGASLFEALAAAYSESHRKYHTLQHLTECLQTFEAVRPLAQ CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPAEVELALWFHDAIYDVKRGDNEAQSADWSMRELEAASVPPDAVNRVHDLVMATRHTEV CCCCEEHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PTYGDQQLLVDVDLSILGAPDERFKEYERQIRDEYSFVPGWIFRRKRRAILKSFLDRRRI CCCCCCEEEEEECHHEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH YSTDHFHLTLEQRARENLSRANSGNAG CCCCCEEEEHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA