Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789773

Identifier: 91789773

GI number: 91789773

Start: 4123453

End: 4124388

Strand: Reverse

Name: 91789773

Synonym: Bpro_3933

Alternate gene names: NA

Gene position: 4124388-4123453 (Counterclockwise)

Preceding gene: 91789774

Following gene: 91789772

Centisome position: 79.31

GC content: 66.24

Gene sequence:

>936_bases
ATGACAAAAAACAAAGCCCGGCGTCGCGCAGACGACTGCCTTCGCCAATTTCCTGCTTCACACTATTGGGTCATGAATAA
ACACCCTTTTGACCAGGCCCTCCGGCTGGAAGCCGCCGGCAGTGACCGGCCCGACACCTGGCTGGGCGCCAGCAGCCCGG
CTTACTGGAACATGGTGGGCCCGTTTGGCGGCACCACCGCGGCGACGGCCTTGCAGGCGATCTTGCGGCATCCGTCCCTG
CTGGGCGAGCCGATAGCCCTGACCGTGAACTACGCCAGTGCCATGGCTGAAGGGCCGTTCAGCATCACGGCCACACCCGT
GCGCACCAACCGCTCGACGCAGCACTGGACGGTGGAGCTGCTGCAGGCCGATGCGTCTGGCGCGGAGGCGGTGGTGATGA
CGGCGACGGCGGTGACGGCCGCGCGGCGCGAAACCTGGAGCGCGAACGACACGCCCATGCCCGCTGTCGGGTTTTTAGAT
ACCTTGCCTCGGCTGCGGTTCGGCTCGTCCGAGTGGACCCGCCGCTACGACATCCGCGTGGCGCGCGGCATGATTCCAGA
GGTCTGGGATGGCAGCTGCCAAGGCGGAGAAAAAGGCGGTGAAGAGGGCGGTGAAGGGGGCAGCCTGACGCAGCTCTGGG
TACGCGACGAGCCGCCGCGCCCGCTGGACTTTCTCGCGCTGACGGCCATGGCCGATGCGTTTTACCCCCGCGTCTGGCTG
CGCCGCGCGACCCGGGTGCCGGCCGGTACGGTGTCGATCACGGTGTACTTCCATGCAGACAGCCGGCAGCTGGCGCAAAG
CGGCGAGGGGCATTTGCTGGGCCAGGCGCGGGGCCAGAACTTCCGCAACGGCTTTTTTGACCAAACCGTGCAGGTCTGGA
ATCAGGCGGGCGCCCTGCTGGCGACCAGCAGCCAGATGGTGTACTACAAGGAATAA

Upstream 100 bases:

>100_bases
GGCATCCCGTGATCCCGAAGTCGCTCACCATGTGCTCGCGCCGTTTGGCCGTATCCGCCGCCCCAAAGCTGCCATTGCCC
AGGCGTGCAGACGAGCATCA

Downstream 100 bases:

>100_bases
ACTGGAATCACAAGGGATAAACTGGACCGGCATAGCCCGGACCATAAGACTACAGGACTATATTTTCGGCATCGCCATGG
GCTTCACTCATCTGGCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTKNKARRRADDCLRQFPASHYWVMNKHPFDQALRLEAAGSDRPDTWLGASSPAYWNMVGPFGGTTAATALQAILRHPSL
LGEPIALTVNYASAMAEGPFSITATPVRTNRSTQHWTVELLQADASGAEAVVMTATAVTAARRETWSANDTPMPAVGFLD
TLPRLRFGSSEWTRRYDIRVARGMIPEVWDGSCQGGEKGGEEGGEGGSLTQLWVRDEPPRPLDFLALTAMADAFYPRVWL
RRATRVPAGTVSITVYFHADSRQLAQSGEGHLLGQARGQNFRNGFFDQTVQVWNQAGALLATSSQMVYYKE

Sequences:

>Translated_311_residues
MTKNKARRRADDCLRQFPASHYWVMNKHPFDQALRLEAAGSDRPDTWLGASSPAYWNMVGPFGGTTAATALQAILRHPSL
LGEPIALTVNYASAMAEGPFSITATPVRTNRSTQHWTVELLQADASGAEAVVMTATAVTAARRETWSANDTPMPAVGFLD
TLPRLRFGSSEWTRRYDIRVARGMIPEVWDGSCQGGEKGGEEGGEGGSLTQLWVRDEPPRPLDFLALTAMADAFYPRVWL
RRATRVPAGTVSITVYFHADSRQLAQSGEGHLLGQARGQNFRNGFFDQTVQVWNQAGALLATSSQMVYYKE
>Mature_310_residues
TKNKARRRADDCLRQFPASHYWVMNKHPFDQALRLEAAGSDRPDTWLGASSPAYWNMVGPFGGTTAATALQAILRHPSLL
GEPIALTVNYASAMAEGPFSITATPVRTNRSTQHWTVELLQADASGAEAVVMTATAVTAARRETWSANDTPMPAVGFLDT
LPRLRFGSSEWTRRYDIRVARGMIPEVWDGSCQGGEKGGEEGGEGGSLTQLWVRDEPPRPLDFLALTAMADAFYPRVWLR
RATRVPAGTVSITVYFHADSRQLAQSGEGHLLGQARGQNFRNGFFDQTVQVWNQAGALLATSSQMVYYKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34181; Mature: 34050

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNKARRRADDCLRQFPASHYWVMNKHPFDQALRLEAAGSDRPDTWLGASSPAYWNMVG
CCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHEEEECCCCCCCCCCCCCCCCEEEEEC
PFGGTTAATALQAILRHPSLLGEPIALTVNYASAMAEGPFSITATPVRTNRSTQHWTVEL
CCCCHHHHHHHHHHHHCHHHCCCCEEEEEEHHHHHCCCCCEEEEEEEECCCCCCCEEEEE
LQADASGAEAVVMTATAVTAARRETWSANDTPMPAVGFLDTLPRLRFGSSEWTRRYDIRV
EECCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHEEEEEEE
ARGMIPEVWDGSCQGGEKGGEEGGEGGSLTQLWVRDEPPRPLDFLALTAMADAFYPRVWL
HHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
RRATRVPAGTVSITVYFHADSRQLAQSGEGHLLGQARGQNFRNGFFDQTVQVWNQAGALL
HHHHCCCCCEEEEEEEEECCCHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEE
ATSSQMVYYKE
EECCCEEEEEC
>Mature Secondary Structure 
TKNKARRRADDCLRQFPASHYWVMNKHPFDQALRLEAAGSDRPDTWLGASSPAYWNMVG
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHEEEECCCCCCCCCCCCCCCCEEEEEC
PFGGTTAATALQAILRHPSLLGEPIALTVNYASAMAEGPFSITATPVRTNRSTQHWTVEL
CCCCHHHHHHHHHHHHCHHHCCCCEEEEEEHHHHHCCCCCEEEEEEEECCCCCCCEEEEE
LQADASGAEAVVMTATAVTAARRETWSANDTPMPAVGFLDTLPRLRFGSSEWTRRYDIRV
EECCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHEEEEEEE
ARGMIPEVWDGSCQGGEKGGEEGGEGGSLTQLWVRDEPPRPLDFLALTAMADAFYPRVWL
HHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
RRATRVPAGTVSITVYFHADSRQLAQSGEGHLLGQARGQNFRNGFFDQTVQVWNQAGALL
HHHHCCCCCEEEEEEEEECCCHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEE
ATSSQMVYYKE
EECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA