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The map label for this gene is bioC [C]

Identifier: 91789769

GI number: 91789769

Start: 4120412

End: 4121221

Strand: Reverse

Name: bioC [C]

Synonym: Bpro_3929

Alternate gene names: 91789769

Gene position: 4121221-4120412 (Counterclockwise)

Preceding gene: 91789771

Following gene: 91789768

Centisome position: 79.25

GC content: 66.91

Gene sequence:

>810_bases
ATGGACATAGCGATTCAAACGCATAACCAGCGCCCGGCGGCCGTCTGGAGTTCGGGCGGACTGGACTATGACCAGATCAG
CCGTGGCATCAGCGACTCCATCGACCATTGCGTGCTGCGGCTGGACCCGAAGCCCGGCGAGAGCATTCTCGACCTGGCCA
CGGGCACCGGCTGGACCTCGCGCGTGGTCGCGCGGCGTGGCGCGCGGGTGACCGGCGTGGACATCGCCTCGGAACTGGTG
GCCGCCGCCAAGGCCCGGGCCGAAGCCGAAGGGCTTGCCATCGACTACCGCATCGGCGACGCCGAAAGCCTCCCGTTCGC
CGATGGCGCGTTCGACGCCGTCATCTCGACCTGTGGCGTCATGTTTGCCAGCCGGCCGGAAGCGGCCGCAGCCGAACTGG
CGCGCGTCACTCGCCATAGCGGGCGCATTGCGTTGACGACCTGGCTGAACGACAGCAACGTGGCCAGGATGTTCCAGGTC
ATGAAGCCCTACATGGCCGCGCCCCCGGACCCGGCGCCGCCTTCGCCTTTCGAGTGGGGCCGCACGGAGCGCATTCGCGA
ACTGCTGGCGCGCGACTTCGACCTCAAGTTCGAGAAGGGCGTTTCCTACTATCGCGAGCCCTCCGGGGAATCCGCCTGGC
AGACCTTTTCTACAGGCTACGGTCCGACCAAGGCCCTGGCCGCGAGCCTCGACGAAAGCCGGCGCGCGCAGCTGCGGCGC
GACTTTATCGCCTTCCACGACAGTTTCGCGACGGAACTGGGCATCTGCGTGCCGCGCGAATACTGGGTGACGGTGGGTGT
GAGAAAGTAA

Upstream 100 bases:

>100_bases
CTCTTTGCCGCCTCTGTTCGTCGCCTTGGGTGCTTCCATTCTCGCGAAGCTCCATGGCGCGGCGGGACAAAAACACCAGC
GAGAAAGCGGAGACCTTTCC

Downstream 100 bases:

>100_bases
TCCTGAAAGGAGATGAGCCATGATGATTGCACGCTGGAGCATTGATGCGAAGTTCGGCTACAAGCAGAATGCGGTGGACC
TGATGCAGCGCTGGCTGCGG

Product: UbiE/COQ5 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MDIAIQTHNQRPAAVWSSGGLDYDQISRGISDSIDHCVLRLDPKPGESILDLATGTGWTSRVVARRGARVTGVDIASELV
AAAKARAEAEGLAIDYRIGDAESLPFADGAFDAVISTCGVMFASRPEAAAAELARVTRHSGRIALTTWLNDSNVARMFQV
MKPYMAAPPDPAPPSPFEWGRTERIRELLARDFDLKFEKGVSYYREPSGESAWQTFSTGYGPTKALAASLDESRRAQLRR
DFIAFHDSFATELGICVPREYWVTVGVRK

Sequences:

>Translated_269_residues
MDIAIQTHNQRPAAVWSSGGLDYDQISRGISDSIDHCVLRLDPKPGESILDLATGTGWTSRVVARRGARVTGVDIASELV
AAAKARAEAEGLAIDYRIGDAESLPFADGAFDAVISTCGVMFASRPEAAAAELARVTRHSGRIALTTWLNDSNVARMFQV
MKPYMAAPPDPAPPSPFEWGRTERIRELLARDFDLKFEKGVSYYREPSGESAWQTFSTGYGPTKALAASLDESRRAQLRR
DFIAFHDSFATELGICVPREYWVTVGVRK
>Mature_269_residues
MDIAIQTHNQRPAAVWSSGGLDYDQISRGISDSIDHCVLRLDPKPGESILDLATGTGWTSRVVARRGARVTGVDIASELV
AAAKARAEAEGLAIDYRIGDAESLPFADGAFDAVISTCGVMFASRPEAAAAELARVTRHSGRIALTTWLNDSNVARMFQV
MKPYMAAPPDPAPPSPFEWGRTERIRELLARDFDLKFEKGVSYYREPSGESAWQTFSTGYGPTKALAASLDESRRAQLRR
DFIAFHDSFATELGICVPREYWVTVGVRK

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1403c [H]

Homologues:

Organism=Escherichia coli, GI1786994, Length=130, Percent_Identity=32.3076923076923, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 29455; Mature: 29455

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIAIQTHNQRPAAVWSSGGLDYDQISRGISDSIDHCVLRLDPKPGESILDLATGTGWTS
CCEEEECCCCCCCEEECCCCCCHHHHHCCHHHHHHHEEEEECCCCCCHHHHHHCCCCHHH
RVVARRGARVTGVDIASELVAAAKARAEAEGLAIDYRIGDAESLPFADGAFDAVISTCGV
HHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
MFASRPEAAAAELARVTRHSGRIALTTWLNDSNVARMFQVMKPYMAAPPDPAPPSPFEWG
HHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RTERIRELLARDFDLKFEKGVSYYREPSGESAWQTFSTGYGPTKALAASLDESRRAQLRR
HHHHHHHHHHHCCCCCHHHCCHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DFIAFHDSFATELGICVPREYWVTVGVRK
HHHHHHHHHHHHHCCCCCCCEEEEEECCC
>Mature Secondary Structure
MDIAIQTHNQRPAAVWSSGGLDYDQISRGISDSIDHCVLRLDPKPGESILDLATGTGWTS
CCEEEECCCCCCCEEECCCCCCHHHHHCCHHHHHHHEEEEECCCCCCHHHHHHCCCCHHH
RVVARRGARVTGVDIASELVAAAKARAEAEGLAIDYRIGDAESLPFADGAFDAVISTCGV
HHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
MFASRPEAAAAELARVTRHSGRIALTTWLNDSNVARMFQVMKPYMAAPPDPAPPSPFEWG
HHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RTERIRELLARDFDLKFEKGVSYYREPSGESAWQTFSTGYGPTKALAASLDESRRAQLRR
HHHHHHHHHHHCCCCCHHHCCHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DFIAFHDSFATELGICVPREYWVTVGVRK
HHHHHHHHHHHHHCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]