| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789766
Identifier: 91789766
GI number: 91789766
Start: 4118629
End: 4119057
Strand: Reverse
Name: 91789766
Synonym: Bpro_3925
Alternate gene names: NA
Gene position: 4119057-4118629 (Counterclockwise)
Preceding gene: 91789768
Following gene: 91789765
Centisome position: 79.21
GC content: 65.27
Gene sequence:
>429_bases ATGATGGCGGCGACGCTCGCCCAACCCTGCGGCCACCCCCGCCATTGGAAAAATAGAAGAATCGCCATGCCCTACATGCT GCTGATCATGGAGCCGCTCGGCCAACGGCTTTCGCGTACCGAGGCCGAGGGCCATGCCGTCTATGAGCGCATGCTCGGGT TTGCGGATGAGCTGCGCGCGCGGGGCCAACTGCTTGCCGTCGAGTCCCTGAACTCGCAGGCCAACGCCGTCCGCGTCAAG GTGCGCGAGGGGCGGCCCCAGTTGCTGGACGGCCCCTTCGCCGAAGCCAAGGAAATGGTCGGCGGCTTCTTCCTGGTCGA TTGCAAGACCCGGGCCGAAGCCATCGCGATCGCGGAACAATGTCCGGCGGCCGAGTGGTGCACCGTTGAGGTTCGCGGCG TCGGACCCTGTTACGAAGATGCGGTTTGA
Upstream 100 bases:
>100_bases CCTTTTCAAGTATCAGGTGACATCGTTGCGGGTGTGTTGACGCGGATCATGCGTGGATCATGTCGTGTACAACGGGCTGC GCCCGGGCCATGCCACAGCT
Downstream 100 bases:
>100_bases TTCCTTGTTGATGGCGACTAGGGTTTTTACCTAATAGATATCTGGCGAAAACTGTCGATTTCGCAGCGCCTCGTTCGTCG TGGGAGTAGAAGCCGCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: YCII-Like Protein; YCII-Related Protein; DGPF Domain-Containing Protein; DGPFAETKE Domain-Containing Protein; DGPF Protein; DGPF Domain-Containing; Dgpf Family Protein; Dgpf Domain Protein; DGPF Domain Superfamily; Dgpfaetke; YCII-Related
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MMAATLAQPCGHPRHWKNRRIAMPYMLLIMEPLGQRLSRTEAEGHAVYERMLGFADELRARGQLLAVESLNSQANAVRVK VREGRPQLLDGPFAEAKEMVGGFFLVDCKTRAEAIAIAEQCPAAEWCTVEVRGVGPCYEDAV
Sequences:
>Translated_142_residues MMAATLAQPCGHPRHWKNRRIAMPYMLLIMEPLGQRLSRTEAEGHAVYERMLGFADELRARGQLLAVESLNSQANAVRVK VREGRPQLLDGPFAEAKEMVGGFFLVDCKTRAEAIAIAEQCPAAEWCTVEVRGVGPCYEDAV >Mature_142_residues MMAATLAQPCGHPRHWKNRRIAMPYMLLIMEPLGQRLSRTEAEGHAVYERMLGFADELRARGQLLAVESLNSQANAVRVK VREGRPQLLDGPFAEAKEMVGGFFLVDCKTRAEAIAIAEQCPAAEWCTVEVRGVGPCYEDAV
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15742; Mature: 15742
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAATLAQPCGHPRHWKNRRIAMPYMLLIMEPLGQRLSRTEAEGHAVYERMLGFADELRA CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHH RGQLLAVESLNSQANAVRVKVREGRPQLLDGPFAEAKEMVGGFFLVDCKTRAEAIAIAEQ CCCEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHH CPAAEWCTVEVRGVGPCYEDAV CCCCCEEEEEEEECCCHHCCCC >Mature Secondary Structure MMAATLAQPCGHPRHWKNRRIAMPYMLLIMEPLGQRLSRTEAEGHAVYERMLGFADELRA CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHH RGQLLAVESLNSQANAVRVKVREGRPQLLDGPFAEAKEMVGGFFLVDCKTRAEAIAIAEQ CCCEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHH CPAAEWCTVEVRGVGPCYEDAV CCCCCEEEEEEEECCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA