Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789766

Identifier: 91789766

GI number: 91789766

Start: 4118629

End: 4119057

Strand: Reverse

Name: 91789766

Synonym: Bpro_3925

Alternate gene names: NA

Gene position: 4119057-4118629 (Counterclockwise)

Preceding gene: 91789768

Following gene: 91789765

Centisome position: 79.21

GC content: 65.27

Gene sequence:

>429_bases
ATGATGGCGGCGACGCTCGCCCAACCCTGCGGCCACCCCCGCCATTGGAAAAATAGAAGAATCGCCATGCCCTACATGCT
GCTGATCATGGAGCCGCTCGGCCAACGGCTTTCGCGTACCGAGGCCGAGGGCCATGCCGTCTATGAGCGCATGCTCGGGT
TTGCGGATGAGCTGCGCGCGCGGGGCCAACTGCTTGCCGTCGAGTCCCTGAACTCGCAGGCCAACGCCGTCCGCGTCAAG
GTGCGCGAGGGGCGGCCCCAGTTGCTGGACGGCCCCTTCGCCGAAGCCAAGGAAATGGTCGGCGGCTTCTTCCTGGTCGA
TTGCAAGACCCGGGCCGAAGCCATCGCGATCGCGGAACAATGTCCGGCGGCCGAGTGGTGCACCGTTGAGGTTCGCGGCG
TCGGACCCTGTTACGAAGATGCGGTTTGA

Upstream 100 bases:

>100_bases
CCTTTTCAAGTATCAGGTGACATCGTTGCGGGTGTGTTGACGCGGATCATGCGTGGATCATGTCGTGTACAACGGGCTGC
GCCCGGGCCATGCCACAGCT

Downstream 100 bases:

>100_bases
TTCCTTGTTGATGGCGACTAGGGTTTTTACCTAATAGATATCTGGCGAAAACTGTCGATTTCGCAGCGCCTCGTTCGTCG
TGGGAGTAGAAGCCGCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: YCII-Like Protein; YCII-Related Protein; DGPF Domain-Containing Protein; DGPFAETKE Domain-Containing Protein; DGPF Protein; DGPF Domain-Containing; Dgpf Family Protein; Dgpf Domain Protein; DGPF Domain Superfamily; Dgpfaetke; YCII-Related

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MMAATLAQPCGHPRHWKNRRIAMPYMLLIMEPLGQRLSRTEAEGHAVYERMLGFADELRARGQLLAVESLNSQANAVRVK
VREGRPQLLDGPFAEAKEMVGGFFLVDCKTRAEAIAIAEQCPAAEWCTVEVRGVGPCYEDAV

Sequences:

>Translated_142_residues
MMAATLAQPCGHPRHWKNRRIAMPYMLLIMEPLGQRLSRTEAEGHAVYERMLGFADELRARGQLLAVESLNSQANAVRVK
VREGRPQLLDGPFAEAKEMVGGFFLVDCKTRAEAIAIAEQCPAAEWCTVEVRGVGPCYEDAV
>Mature_142_residues
MMAATLAQPCGHPRHWKNRRIAMPYMLLIMEPLGQRLSRTEAEGHAVYERMLGFADELRARGQLLAVESLNSQANAVRVK
VREGRPQLLDGPFAEAKEMVGGFFLVDCKTRAEAIAIAEQCPAAEWCTVEVRGVGPCYEDAV

Specific function: Unknown

COG id: COG3795

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15742; Mature: 15742

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAATLAQPCGHPRHWKNRRIAMPYMLLIMEPLGQRLSRTEAEGHAVYERMLGFADELRA
CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHH
RGQLLAVESLNSQANAVRVKVREGRPQLLDGPFAEAKEMVGGFFLVDCKTRAEAIAIAEQ
CCCEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHH
CPAAEWCTVEVRGVGPCYEDAV
CCCCCEEEEEEEECCCHHCCCC
>Mature Secondary Structure
MMAATLAQPCGHPRHWKNRRIAMPYMLLIMEPLGQRLSRTEAEGHAVYERMLGFADELRA
CCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHH
RGQLLAVESLNSQANAVRVKVREGRPQLLDGPFAEAKEMVGGFFLVDCKTRAEAIAIAEQ
CCCEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHH
CPAAEWCTVEVRGVGPCYEDAV
CCCCCEEEEEEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA