| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789764
Identifier: 91789764
GI number: 91789764
Start: 4117511
End: 4118041
Strand: Reverse
Name: 91789764
Synonym: Bpro_3923
Alternate gene names: NA
Gene position: 4118041-4117511 (Counterclockwise)
Preceding gene: 91789765
Following gene: 91789763
Centisome position: 79.19
GC content: 66.29
Gene sequence:
>531_bases ATGATCAAGACCCTGGCCCTCATCGCCGTCGCCGCCATTGGCGCGCTGCTGATCTTTGCCGCCACCCGGCCCGACACCTT CCGCGTGCAGCGCAGCGCCAGCATCAAGGCCGCGCCCGACACGCTGTACCCGCTCATCAACGACCTGCGGCAGTTCAACA CCTGGAACCCCTACGAGAAGAAAGACCCGGCCATCAAGGGCAGCTACCGCGGCCCGGCCAGCGGCCCCGGGGCGGGCTAC GACTTCCAGGGCAACAAGGACGTCGGCAAAGGCAGCATCGAGATCGTCGAGTCCTCGCCACCCGGCAAGGTCACGATGAA GCTGGACATGCTCGAACCCTTTGAAGGGCACAACGTCGTCGAGTTCAGTCTGGCGCCGCGCGGCGATGCCACGGAGGTCA CCTGGGCCATGCACGGCCCGAGTCCTTTCGTGGCCAGGCTGGTGGGCGTGTTCCTCAACATGGACCGCATGATAGGCCGC GACTTCGAAGCAGGTCTCGCCAACCTCAAGGCCCGGGCCGAGCGCGCCTGA
Upstream 100 bases:
>100_bases AGGTGCGCCAGCTTTATGAGCTGGACGACTTTTCCCCCAGCGAGTCGGTCGAGCGCTTCCGCAAAATGAACACACCCAGC CAGAAGTGAGGGGGCGCGCC
Downstream 100 bases:
>100_bases GGGGCGCAGGCTTCTTTTTCATCCGGTTTTAACCCGGTTTTCAGATTCATTCATTCATTGCTTATTCCAAGGAGTACCTC ATGAGCCGCCAGATTTACGT
Product: hypothetical protein
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; DoxX Family Domain-Containing Protein; Transcriptional Activator; Signal Peptide; DoxX Family Protein; Polyketide Cyclase / Dehydrase And Lipid Transport
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MIKTLALIAVAAIGALLIFAATRPDTFRVQRSASIKAAPDTLYPLINDLRQFNTWNPYEKKDPAIKGSYRGPASGPGAGY DFQGNKDVGKGSIEIVESSPPGKVTMKLDMLEPFEGHNVVEFSLAPRGDATEVTWAMHGPSPFVARLVGVFLNMDRMIGR DFEAGLANLKARAERA
Sequences:
>Translated_176_residues MIKTLALIAVAAIGALLIFAATRPDTFRVQRSASIKAAPDTLYPLINDLRQFNTWNPYEKKDPAIKGSYRGPASGPGAGY DFQGNKDVGKGSIEIVESSPPGKVTMKLDMLEPFEGHNVVEFSLAPRGDATEVTWAMHGPSPFVARLVGVFLNMDRMIGR DFEAGLANLKARAERA >Mature_176_residues MIKTLALIAVAAIGALLIFAATRPDTFRVQRSASIKAAPDTLYPLINDLRQFNTWNPYEKKDPAIKGSYRGPASGPGAGY DFQGNKDVGKGSIEIVESSPPGKVTMKLDMLEPFEGHNVVEFSLAPRGDATEVTWAMHGPSPFVARLVGVFLNMDRMIGR DFEAGLANLKARAERA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19063; Mature: 19063
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTLALIAVAAIGALLIFAATRPDTFRVQRSASIKAAPDTLYPLINDLRQFNTWNPYEK CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC KDPAIKGSYRGPASGPGAGYDFQGNKDVGKGSIEIVESSPPGKVTMKLDMLEPFEGHNVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEE EFSLAPRGDATEVTWAMHGPSPFVARLVGVFLNMDRMIGRDFEAGLANLKARAERA EEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MIKTLALIAVAAIGALLIFAATRPDTFRVQRSASIKAAPDTLYPLINDLRQFNTWNPYEK CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC KDPAIKGSYRGPASGPGAGYDFQGNKDVGKGSIEIVESSPPGKVTMKLDMLEPFEGHNVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEE EFSLAPRGDATEVTWAMHGPSPFVARLVGVFLNMDRMIGRDFEAGLANLKARAERA EEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA