Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789757

Identifier: 91789757

GI number: 91789757

Start: 4110380

End: 4112236

Strand: Direct

Name: 91789757

Synonym: Bpro_3916

Alternate gene names: NA

Gene position: 4110380-4112236 (Clockwise)

Preceding gene: 91789756

Following gene: 91789758

Centisome position: 79.04

GC content: 64.94

Gene sequence:

>1857_bases
ATGACGGCCCCGAACGACTCCGCGCGCTTTGTGCCGCCCGCTGAACCCTCGCTCGCGATGGGCGTGATCGGCAACTGCGC
GTTCAGCGCGCTGATTGACATCCGCGGGCGCATTGTCTGGTGCTGCCTGCCGCGCTTTGACGGCGACCCGGTGTTCAATG
CGCTGCTGCAGCCCGGTACCGGCAGGATCGACGGCGCCCATACCAATACCGATACGCAGCCCAGCGCTTTTTCCATTGAA
ATCGAGGATTTTGCCGAGTCCCGGCAATGGTATGAGCCCAATACCGCCGTGCTGCATACCCAGCTGTTTGACAAAAGCGG
CCAGGGTATTGAGATCACCGACTTCGCGCCGCGCTTTTTCAGCCGCTCACGTTTTTTCCGGCCCATGACGCTGGTGCGGC
GCGTGCGCCCCCTCTCCGGCGCGCCCCGCATTCGCGTCTCGCTGGATGTCCGTTTTGACTGGGGCCGGCGTGCACCGCTG
ATCACCCAGGGCAGCAACCACCTGCGTTATGTGGGCGATGCGCTGACGCTGCGGCTGAACACCGACGCGCCGCTGTCGCA
CCTGCTGGCCCGGCAGCCCTTCGTGCTGACCCGCGAGCACAACTTTCTGCTGGGTGCCGACGAGTCGCTGGCCGAGGGCA
TTGCCGACACGGCGCGCCTGTTTGAACAGGAGACCGTCTCGTATTGGAAAAAATGGAGCCAGCGCCTGCACATCCCGCTG
GAATGGCAGGAAGCCGTGATACGCGCCGCGATCACGCTCAAGCTGTCCCTCTTTGAAGACACCGGCGCCATCGTGGCGGC
CATGACCACCAGCATTCCCGAGGCGCCCGGCAGCCAGCGCAACTGGGACTACCGTTTTTGCTGGCTGCGCGATGCTTTCT
TTGTGGTGCGCGCCCTCAACAGCCTGTCGGAGGTCGGCACCATGGAAGACTACCTGCGCTGGCTCAGCAACGTGGTGGTG
CAGGCCAACGGCGGGCACATCCAGCCGCTGTACGGCATTGGCCTGGAGCGCGAGCTGCCGGAGTCCGTGATGGACCATCT
GGGCGGCTACCGCGGCATGGGGCCGGTGCGCGTGGGCAACCAGGCGCAGGAGCACTTCCAGCATGACGTGTATGGCAATG
TAGTGCTGGGTGCGGCGCAGGCCTTTCACGACCACCGGCTGCTGCACCGCGCCGGCCTGGCCGAGTTCCAGCGGCTCGAA
GCAGTGGGCGAGCAGGCCGCTCGCACCTATGACCAGCCCGACGCCGGCATGTGGGAGCTGCGCACCCGTGCCCGGGTCCA
CACCTCGTCGGCCCTGATGTGCTGGGCGGCCTGCGACCGGCTGGCCAAGATCGCCCTGGTGCTTCACCTTCCCGAGCGTG
CAGCCTACTGGCAGGACCATGCACAGCGCATGCAGGAGAACATTTTGCGGAAGGCCTGGAGCGAGGAACGCCAGGCCTTT
GCCGAGAGCTTTGGCGGCCGCGACCTGGACGCCAGTGTGCTGCTGATGATTGAAGTGGGCTTCATCGACCCGAAGGATCC
GCGCTTCATTGCCACCGTCGACGCGCTGGAAACCCATTTGTGCGACGGCCCCTACATGCGCCGCTACGAAGCGCCCGATG
ATTTCGGCAAACCCGAGACCGCCTTCAACATCTGCACCTTCTGGCGCATTGATGCGCTGGCGCGCATAGGGCGCAAGGCG
CAGGCGCGCGAGATTTTTGAGACCATGCTGGCCGCGCGCAACCACGTAGGCCTGCTCTCCGAAGACACGCACCCGGCCAG
CGGCGAGATGTGGGGCAACTTTCCGCAAACCTATTCCATGGTGGGCATCATCAACGCGGCGGTCCGGCTTTCGGCGCCTT
GGGAATCGCAGATATGA

Upstream 100 bases:

>100_bases
GCGCCACCCTGGCCAGGCACCGGTGCGCGGCGCCGGCCGCACTGCGGCAGTGGCTGCAGGCTGCCAGCCAGAATTCGGGC
CACTGGCGCGGGATCAGCCC

Downstream 100 bases:

>100_bases
GGTACACCCCCGTCGGCGGCTCACTGCGTGTAGCCCCTTCCCCCCTTGCAGGGGGCGGCGCCTGCGGCCCGGCGAAGCCG
GTTCCGCGGCCCCTGCTGGC

Product: glycoside hydrolase 15-like protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycoside Hydrolase Family; Glycosy Hydrolase Family Protein; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase-Like Glycosyl Hydrolase; Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; Trehalose 6-Phosphatase; Trehalose Phosphatase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Family Protein; Glucoamylase-Related Protein Trehalase

Number of amino acids: Translated: 618; Mature: 617

Protein sequence:

>618_residues
MTAPNDSARFVPPAEPSLAMGVIGNCAFSALIDIRGRIVWCCLPRFDGDPVFNALLQPGTGRIDGAHTNTDTQPSAFSIE
IEDFAESRQWYEPNTAVLHTQLFDKSGQGIEITDFAPRFFSRSRFFRPMTLVRRVRPLSGAPRIRVSLDVRFDWGRRAPL
ITQGSNHLRYVGDALTLRLNTDAPLSHLLARQPFVLTREHNFLLGADESLAEGIADTARLFEQETVSYWKKWSQRLHIPL
EWQEAVIRAAITLKLSLFEDTGAIVAAMTTSIPEAPGSQRNWDYRFCWLRDAFFVVRALNSLSEVGTMEDYLRWLSNVVV
QANGGHIQPLYGIGLERELPESVMDHLGGYRGMGPVRVGNQAQEHFQHDVYGNVVLGAAQAFHDHRLLHRAGLAEFQRLE
AVGEQAARTYDQPDAGMWELRTRARVHTSSALMCWAACDRLAKIALVLHLPERAAYWQDHAQRMQENILRKAWSEERQAF
AESFGGRDLDASVLLMIEVGFIDPKDPRFIATVDALETHLCDGPYMRRYEAPDDFGKPETAFNICTFWRIDALARIGRKA
QAREIFETMLAARNHVGLLSEDTHPASGEMWGNFPQTYSMVGIINAAVRLSAPWESQI

Sequences:

>Translated_618_residues
MTAPNDSARFVPPAEPSLAMGVIGNCAFSALIDIRGRIVWCCLPRFDGDPVFNALLQPGTGRIDGAHTNTDTQPSAFSIE
IEDFAESRQWYEPNTAVLHTQLFDKSGQGIEITDFAPRFFSRSRFFRPMTLVRRVRPLSGAPRIRVSLDVRFDWGRRAPL
ITQGSNHLRYVGDALTLRLNTDAPLSHLLARQPFVLTREHNFLLGADESLAEGIADTARLFEQETVSYWKKWSQRLHIPL
EWQEAVIRAAITLKLSLFEDTGAIVAAMTTSIPEAPGSQRNWDYRFCWLRDAFFVVRALNSLSEVGTMEDYLRWLSNVVV
QANGGHIQPLYGIGLERELPESVMDHLGGYRGMGPVRVGNQAQEHFQHDVYGNVVLGAAQAFHDHRLLHRAGLAEFQRLE
AVGEQAARTYDQPDAGMWELRTRARVHTSSALMCWAACDRLAKIALVLHLPERAAYWQDHAQRMQENILRKAWSEERQAF
AESFGGRDLDASVLLMIEVGFIDPKDPRFIATVDALETHLCDGPYMRRYEAPDDFGKPETAFNICTFWRIDALARIGRKA
QAREIFETMLAARNHVGLLSEDTHPASGEMWGNFPQTYSMVGIINAAVRLSAPWESQI
>Mature_617_residues
TAPNDSARFVPPAEPSLAMGVIGNCAFSALIDIRGRIVWCCLPRFDGDPVFNALLQPGTGRIDGAHTNTDTQPSAFSIEI
EDFAESRQWYEPNTAVLHTQLFDKSGQGIEITDFAPRFFSRSRFFRPMTLVRRVRPLSGAPRIRVSLDVRFDWGRRAPLI
TQGSNHLRYVGDALTLRLNTDAPLSHLLARQPFVLTREHNFLLGADESLAEGIADTARLFEQETVSYWKKWSQRLHIPLE
WQEAVIRAAITLKLSLFEDTGAIVAAMTTSIPEAPGSQRNWDYRFCWLRDAFFVVRALNSLSEVGTMEDYLRWLSNVVVQ
ANGGHIQPLYGIGLERELPESVMDHLGGYRGMGPVRVGNQAQEHFQHDVYGNVVLGAAQAFHDHRLLHRAGLAEFQRLEA
VGEQAARTYDQPDAGMWELRTRARVHTSSALMCWAACDRLAKIALVLHLPERAAYWQDHAQRMQENILRKAWSEERQAFA
ESFGGRDLDASVLLMIEVGFIDPKDPRFIATVDALETHLCDGPYMRRYEAPDDFGKPETAFNICTFWRIDALARIGRKAQ
AREIFETMLAARNHVGLLSEDTHPASGEMWGNFPQTYSMVGIINAAVRLSAPWESQI

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69676; Mature: 69545

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPNDSARFVPPAEPSLAMGVIGNCAFSALIDIRGRIVWCCLPRFDGDPVFNALLQPGT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCC
GRIDGAHTNTDTQPSAFSIEIEDFAESRQWYEPNTAVLHTQLFDKSGQGIEITDFAPRFF
CCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCEEEEEEHHCCCCCCEEEECCCHHHH
SRSRFFRPMTLVRRVRPLSGAPRIRVSLDVRFDWGRRAPLITQGSNHLRYVGDALTLRLN
HHHHCCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCEEECCCCCEEEECCEEEEEEC
TDAPLSHLLARQPFVLTREHNFLLGADESLAEGIADTARLFEQETVSYWKKWSQRLHIPL
CCCCHHHHHHCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EWQEAVIRAAITLKLSLFEDTGAIVAAMTTSIPEAPGSQRNWDYRFCWLRDAFFVVRALN
HHHHHHHHHHHEEEEEEECCCCCEEEEHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
SLSEVGTMEDYLRWLSNVVVQANGGHIQPLYGIGLERELPESVMDHLGGYRGMGPVRVGN
HHHHCCCHHHHHHHHHHEEEECCCCEECCHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
QAQEHFQHDVYGNVVLGAAQAFHDHRLLHRAGLAEFQRLEAVGEQAARTYDQPDAGMWEL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RTRARVHTSSALMCWAACDRLAKIALVLHLPERAAYWQDHAQRMQENILRKAWSEERQAF
HHHHHHCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESFGGRDLDASVLLMIEVGFIDPKDPRFIATVDALETHLCDGPYMRRYEAPDDFGKPET
HHHCCCCCCCCEEEEEEEEECCCCCCCCEEEEHHHHHHHCCCCCHHHCCCCCCCCCCCCH
AFNICTFWRIDALARIGRKAQAREIFETMLAARNHVGLLSEDTHPASGEMWGNFPQTYSM
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
VGIINAAVRLSAPWESQI
HHHHHHHEEECCCCCCCC
>Mature Secondary Structure 
TAPNDSARFVPPAEPSLAMGVIGNCAFSALIDIRGRIVWCCLPRFDGDPVFNALLQPGT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCC
GRIDGAHTNTDTQPSAFSIEIEDFAESRQWYEPNTAVLHTQLFDKSGQGIEITDFAPRFF
CCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCEEEEEEHHCCCCCCEEEECCCHHHH
SRSRFFRPMTLVRRVRPLSGAPRIRVSLDVRFDWGRRAPLITQGSNHLRYVGDALTLRLN
HHHHCCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCEEECCCCCEEEECCEEEEEEC
TDAPLSHLLARQPFVLTREHNFLLGADESLAEGIADTARLFEQETVSYWKKWSQRLHIPL
CCCCHHHHHHCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EWQEAVIRAAITLKLSLFEDTGAIVAAMTTSIPEAPGSQRNWDYRFCWLRDAFFVVRALN
HHHHHHHHHHHEEEEEEECCCCCEEEEHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
SLSEVGTMEDYLRWLSNVVVQANGGHIQPLYGIGLERELPESVMDHLGGYRGMGPVRVGN
HHHHCCCHHHHHHHHHHEEEECCCCEECCHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
QAQEHFQHDVYGNVVLGAAQAFHDHRLLHRAGLAEFQRLEAVGEQAARTYDQPDAGMWEL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
RTRARVHTSSALMCWAACDRLAKIALVLHLPERAAYWQDHAQRMQENILRKAWSEERQAF
HHHHHHCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESFGGRDLDASVLLMIEVGFIDPKDPRFIATVDALETHLCDGPYMRRYEAPDDFGKPET
HHHCCCCCCCCEEEEEEEEECCCCCCCCEEEEHHHHHHHCCCCCHHHCCCCCCCCCCCCH
AFNICTFWRIDALARIGRKAQAREIFETMLAARNHVGLLSEDTHPASGEMWGNFPQTYSM
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
VGIINAAVRLSAPWESQI
HHHHHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA