Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789741

Identifier: 91789741

GI number: 91789741

Start: 4094259

End: 4094987

Strand: Direct

Name: 91789741

Synonym: Bpro_3899

Alternate gene names: NA

Gene position: 4094259-4094987 (Clockwise)

Preceding gene: 91789740

Following gene: 91789742

Centisome position: 78.73

GC content: 53.22

Gene sequence:

>729_bases
ATGACCGTCACGGAAAGCATCGACAAGTTCTGCGAGTACTTCGAACGCCAGTCTGCGGCAATTGGATGCGTCACGGTCTC
AACGGCTAACGATGCTGACAGTAGCGCCGGAAGCGAATTTCGGTACAGGAAGGTTCTCTGTTTAACTGCGATTGACACAC
TAGCGGGGCTCAGATACCACAAGTCTGCCTACCCTCAGTTGTCCCGCCAGAATCGTGAGCGCTTCACTCGCTTCGTGAAG
GAACATGGATCATGGCCAGAAGGAGAGCTTGTGAGCCTGCCCTTTCTCCGAGACGAACTGAAAACACTAAAACTCCTTCA
TCGCCCGCTCGGCCAACACGTGACCCAAAAGGTAGACGCACACTCTACGGACGACGGTGGATCATTGCTAGTCACTGAGA
TTGACGAACCTGCCGACGAACTGCTCGCGTTGGCTTCAACTGAGAAGGAAGAGGAAGCGATTCGCGATTATCAACACCGA
GCCCTTCTTTATCGTTACCGCAACAGCCTAGTCCACGAGTCTCGCGAGCCCGGTATGGCCATGGAAGTATTTCCTACGTC
TGGCGCGCCCTACTACCACGGCTATATTGGCGACCCGAATTGGTATCTTGCATATCCACCACCTCTCTTCACGCTTCTGC
TTCAACGGGCCATTGCTAGTTTTCGTACGTATCTATCGACAAATTCTATCGACCCATATGCACTCGTCGAAGACCAAGCG
CGCTGGTGA

Upstream 100 bases:

>100_bases
TGCCGCATAACAAGTGGTTGCGGGGACGCACGAAACAGCAGCCTCATAACTTTATAGGTGCGATCTTCGCGCGCCCCTGA
ACCATGTTAGGGTACATGCA

Downstream 100 bases:

>100_bases
CATGTGCCCTTTACAGGGACTCCCCGAGAAGTCAAGTAACGGTACTCAATTGATATTCCTAGGTGACGGGTTTCCTGCGC
TGGCGTGAGGTGAAGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTVTESIDKFCEYFERQSAAIGCVTVSTANDADSSAGSEFRYRKVLCLTAIDTLAGLRYHKSAYPQLSRQNRERFTRFVK
EHGSWPEGELVSLPFLRDELKTLKLLHRPLGQHVTQKVDAHSTDDGGSLLVTEIDEPADELLALASTEKEEEAIRDYQHR
ALLYRYRNSLVHESREPGMAMEVFPTSGAPYYHGYIGDPNWYLAYPPPLFTLLLQRAIASFRTYLSTNSIDPYALVEDQA
RW

Sequences:

>Translated_242_residues
MTVTESIDKFCEYFERQSAAIGCVTVSTANDADSSAGSEFRYRKVLCLTAIDTLAGLRYHKSAYPQLSRQNRERFTRFVK
EHGSWPEGELVSLPFLRDELKTLKLLHRPLGQHVTQKVDAHSTDDGGSLLVTEIDEPADELLALASTEKEEEAIRDYQHR
ALLYRYRNSLVHESREPGMAMEVFPTSGAPYYHGYIGDPNWYLAYPPPLFTLLLQRAIASFRTYLSTNSIDPYALVEDQA
RW
>Mature_241_residues
TVTESIDKFCEYFERQSAAIGCVTVSTANDADSSAGSEFRYRKVLCLTAIDTLAGLRYHKSAYPQLSRQNRERFTRFVKE
HGSWPEGELVSLPFLRDELKTLKLLHRPLGQHVTQKVDAHSTDDGGSLLVTEIDEPADELLALASTEKEEEAIRDYQHRA
LLYRYRNSLVHESREPGMAMEVFPTSGAPYYHGYIGDPNWYLAYPPPLFTLLLQRAIASFRTYLSTNSIDPYALVEDQAR
W

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27587; Mature: 27456

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTESIDKFCEYFERQSAAIGCVTVSTANDADSSAGSEFRYRKVLCLTAIDTLAGLRYH
CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KSAYPQLSRQNRERFTRFVKEHGSWPEGELVSLPFLRDELKTLKLLHRPLGQHVTQKVDA
HHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
HSTDDGGSLLVTEIDEPADELLALASTEKEEEAIRDYQHRALLYRYRNSLVHESREPGMA
CCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
MEVFPTSGAPYYHGYIGDPNWYLAYPPPLFTLLLQRAIASFRTYLSTNSIDPYALVEDQA
EEEEECCCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC
RW
CC
>Mature Secondary Structure 
TVTESIDKFCEYFERQSAAIGCVTVSTANDADSSAGSEFRYRKVLCLTAIDTLAGLRYH
CCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KSAYPQLSRQNRERFTRFVKEHGSWPEGELVSLPFLRDELKTLKLLHRPLGQHVTQKVDA
HHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
HSTDDGGSLLVTEIDEPADELLALASTEKEEEAIRDYQHRALLYRYRNSLVHESREPGMA
CCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
MEVFPTSGAPYYHGYIGDPNWYLAYPPPLFTLLLQRAIASFRTYLSTNSIDPYALVEDQA
EEEEECCCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC
RW
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA