Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is dnaJ [H]

Identifier: 91789739

GI number: 91789739

Start: 4090278

End: 4090553

Strand: Reverse

Name: dnaJ [H]

Synonym: Bpro_3897

Alternate gene names: 91789739

Gene position: 4090553-4090278 (Counterclockwise)

Preceding gene: 91789743

Following gene: 91789738

Centisome position: 78.66

GC content: 60.87

Gene sequence:

>276_bases
ATGACCGATCACTACACCACCCTTGGGCTCAACAGCGCTGCGACGCTGGCCGATGTCAAGAAGGCCTTTCGCCAGAAAGC
GTCTTTCTTGCACCCCGACAAAAACGCCGCCACTGATGCGGGGGCGCGCTTCCGTGCGGTGCAGGAGGCTTACGCGGTGC
TGTCCGATGCGGACAAACGGCAAGCCTATGACGACAACCGGCGCCGCAACCTGCTCGACAGTCCGGTCGAGACGGCGCGC
GAGATCTGGACAAATTATTTCAACCCCCTGCTTTGA

Upstream 100 bases:

>100_bases
AGGGGCAGCGCGTTTGCTGGCGATATCCCGGGTACACCAAAATCCTCCGCATTTCGGATGAGCCAACAGCTGTTGGTTCT
ACCGAAACGCTTGCGCTCAT

Downstream 100 bases:

>100_bases
TACGTGCATGACACGAAGGACCCCGTGACATGACGATCACCCCTTTTTTCCTTGAGTTGCGTTCGGCCTACCAGTCTGAA
ATCGATGACCTGACCTTTGA

Product: heat shock protein DnaJ-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MTDHYTTLGLNSAATLADVKKAFRQKASFLHPDKNAATDAGARFRAVQEAYAVLSDADKRQAYDDNRRRNLLDSPVETAR
EIWTNYFNPLL

Sequences:

>Translated_91_residues
MTDHYTTLGLNSAATLADVKKAFRQKASFLHPDKNAATDAGARFRAVQEAYAVLSDADKRQAYDDNRRRNLLDSPVETAR
EIWTNYFNPLL
>Mature_90_residues
TDHYTTLGLNSAATLADVKKAFRQKASFLHPDKNAATDAGARFRAVQEAYAVLSDADKRQAYDDNRRRNLLDSPVETARE
IWTNYFNPLL

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI6631085, Length=62, Percent_Identity=48.3870967741936, Blast_Score=66, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6320888, Length=89, Percent_Identity=41.5730337078652, Blast_Score=60, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24646562, Length=64, Percent_Identity=50, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24646560, Length=64, Percent_Identity=50, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24646558, Length=64, Percent_Identity=50, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24646556, Length=64, Percent_Identity=50, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357547, Length=64, Percent_Identity=50, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85726398, Length=62, Percent_Identity=51.6129032258064, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 10290; Mature: 10158

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHYTTLGLNSAATLADVKKAFRQKASFLHPDKNAATDAGARFRAVQEAYAVLSDADKR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QAYDDNRRRNLLDSPVETAREIWTNYFNPLL
HHHCCHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDHYTTLGLNSAATLADVKKAFRQKASFLHPDKNAATDAGARFRAVQEAYAVLSDADKR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QAYDDNRRRNLLDSPVETAREIWTNYFNPLL
HHHCCHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA