| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is dnaJ [H]
Identifier: 91789739
GI number: 91789739
Start: 4090278
End: 4090553
Strand: Reverse
Name: dnaJ [H]
Synonym: Bpro_3897
Alternate gene names: 91789739
Gene position: 4090553-4090278 (Counterclockwise)
Preceding gene: 91789743
Following gene: 91789738
Centisome position: 78.66
GC content: 60.87
Gene sequence:
>276_bases ATGACCGATCACTACACCACCCTTGGGCTCAACAGCGCTGCGACGCTGGCCGATGTCAAGAAGGCCTTTCGCCAGAAAGC GTCTTTCTTGCACCCCGACAAAAACGCCGCCACTGATGCGGGGGCGCGCTTCCGTGCGGTGCAGGAGGCTTACGCGGTGC TGTCCGATGCGGACAAACGGCAAGCCTATGACGACAACCGGCGCCGCAACCTGCTCGACAGTCCGGTCGAGACGGCGCGC GAGATCTGGACAAATTATTTCAACCCCCTGCTTTGA
Upstream 100 bases:
>100_bases AGGGGCAGCGCGTTTGCTGGCGATATCCCGGGTACACCAAAATCCTCCGCATTTCGGATGAGCCAACAGCTGTTGGTTCT ACCGAAACGCTTGCGCTCAT
Downstream 100 bases:
>100_bases TACGTGCATGACACGAAGGACCCCGTGACATGACGATCACCCCTTTTTTCCTTGAGTTGCGTTCGGCCTACCAGTCTGAA ATCGATGACCTGACCTTTGA
Product: heat shock protein DnaJ-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MTDHYTTLGLNSAATLADVKKAFRQKASFLHPDKNAATDAGARFRAVQEAYAVLSDADKRQAYDDNRRRNLLDSPVETAR EIWTNYFNPLL
Sequences:
>Translated_91_residues MTDHYTTLGLNSAATLADVKKAFRQKASFLHPDKNAATDAGARFRAVQEAYAVLSDADKRQAYDDNRRRNLLDSPVETAR EIWTNYFNPLL >Mature_90_residues TDHYTTLGLNSAATLADVKKAFRQKASFLHPDKNAATDAGARFRAVQEAYAVLSDADKRQAYDDNRRRNLLDSPVETARE IWTNYFNPLL
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI6631085, Length=62, Percent_Identity=48.3870967741936, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6320888, Length=89, Percent_Identity=41.5730337078652, Blast_Score=60, Evalue=5e-11, Organism=Drosophila melanogaster, GI24646562, Length=64, Percent_Identity=50, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24646560, Length=64, Percent_Identity=50, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24646558, Length=64, Percent_Identity=50, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24646556, Length=64, Percent_Identity=50, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357547, Length=64, Percent_Identity=50, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI85726398, Length=62, Percent_Identity=51.6129032258064, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 10290; Mature: 10158
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHYTTLGLNSAATLADVKKAFRQKASFLHPDKNAATDAGARFRAVQEAYAVLSDADKR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QAYDDNRRRNLLDSPVETAREIWTNYFNPLL HHHCCHHHHHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDHYTTLGLNSAATLADVKKAFRQKASFLHPDKNAATDAGARFRAVQEAYAVLSDADKR CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QAYDDNRRRNLLDSPVETAREIWTNYFNPLL HHHCCHHHHHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA