Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789712

Identifier: 91789712

GI number: 91789712

Start: 4059926

End: 4060873

Strand: Reverse

Name: 91789712

Synonym: Bpro_3870

Alternate gene names: NA

Gene position: 4060873-4059926 (Counterclockwise)

Preceding gene: 91789717

Following gene: 91789711

Centisome position: 78.09

GC content: 62.66

Gene sequence:

>948_bases
ATGGCCGCAGGCCTGGCCAGCTCGGCCGGGGTGCAGGCCCAGGACTATCCCGGCAAGCCCATCACCCTCGTGGTGCCTTT
TTCAGCAGGCGGGGGCGTCGACACGATCGCGCGCCTGCTTGCCGAAAAGCTTCGTGTCTCGCTGAAGCAGTCCATCGTGG
TGGACAACAAGGCCGGCGGCAGCGGCATGATTGGCGCGCAAGCCGTGGTGAGGGCTGTGCCCGACGGCTACACGCTTTTG
TTGGGTTCGGCGGGTGAAACCGCCATCAATCCCTTTGTCTACAAGGGCCGGATGCAGTACACGCCGGCGAAAGACCTGGC
GCCGATCACCCTGGTGACGCGCATTCCCAATGTGCTGGTCACCAGCCCGACCCTTCCGGTCAAGAACATGGAGGAGTTGA
TAGCGCACGCCAAAAAGAACCCCGGCAAGCTGTCTTATTCGACCAGCGGTGTCGGCAACCCCCAGCACCTCAACGGCGAA
CTGCTGGAGGAGCTTGCCGGTATCCACATGGTTCACATTCCCTATCGGGGCGCGGCAGGTCAATTGATTGACGTCACCTC
GGGCACGGTCGACATGACCTTTGTCAGCTACACCGCGGCCAAGGGCTTCATCCAGAGCGGCAAGGTCAAGGCCATCGCCG
TGACCTCGGCCAGGCGCGCCAGTTTTGCGCCCGACATCCCTGCCATCGCCGAGTACAAGCCGCTGGCCAGGTACCAGCTG
GAAAACTGGTTCGGCCTGTTTGCGCCGGCCGGCACGCCAGACGCCGTGCAGCAAAAGCTCAATGCGGCGGTCACGCAGGC
CTTGCGTGATCCTGAATTGGCGAAAAAACTCCGGGAGCAGGGCGGAGAGCCCGCTCCCATGACGGCGCAGGAGTTTCGTG
ACTTCATCAAGACCGAGGCCGTGCAGTTCGAACGCATTGTCAGAACGGCCAACATCACGGCGGAATAG

Upstream 100 bases:

>100_bases
TAAAATGCAATTAAGCACAAACCCTAGACGCAAATTCCAGCCTCATTCAAGGAGCTTTCCCGTGCAACTTCCCCGTCGTT
TCGTTTTCCAGGGCCTTTTG

Downstream 100 bases:

>100_bases
GCCGCAGCCTCCATTTCTTTCCCTCCTTCTTCCTCTTTTTCCGTCCTTTCGTTTTTCTTTTTCCACATGACCTTCAACCA
GGAGACCTTCATGCATCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MAAGLASSAGVQAQDYPGKPITLVVPFSAGGGVDTIARLLAEKLRVSLKQSIVVDNKAGGSGMIGAQAVVRAVPDGYTLL
LGSAGETAINPFVYKGRMQYTPAKDLAPITLVTRIPNVLVTSPTLPVKNMEELIAHAKKNPGKLSYSTSGVGNPQHLNGE
LLEELAGIHMVHIPYRGAAGQLIDVTSGTVDMTFVSYTAAKGFIQSGKVKAIAVTSARRASFAPDIPAIAEYKPLARYQL
ENWFGLFAPAGTPDAVQQKLNAAVTQALRDPELAKKLREQGGEPAPMTAQEFRDFIKTEAVQFERIVRTANITAE

Sequences:

>Translated_315_residues
MAAGLASSAGVQAQDYPGKPITLVVPFSAGGGVDTIARLLAEKLRVSLKQSIVVDNKAGGSGMIGAQAVVRAVPDGYTLL
LGSAGETAINPFVYKGRMQYTPAKDLAPITLVTRIPNVLVTSPTLPVKNMEELIAHAKKNPGKLSYSTSGVGNPQHLNGE
LLEELAGIHMVHIPYRGAAGQLIDVTSGTVDMTFVSYTAAKGFIQSGKVKAIAVTSARRASFAPDIPAIAEYKPLARYQL
ENWFGLFAPAGTPDAVQQKLNAAVTQALRDPELAKKLREQGGEPAPMTAQEFRDFIKTEAVQFERIVRTANITAE
>Mature_314_residues
AAGLASSAGVQAQDYPGKPITLVVPFSAGGGVDTIARLLAEKLRVSLKQSIVVDNKAGGSGMIGAQAVVRAVPDGYTLLL
GSAGETAINPFVYKGRMQYTPAKDLAPITLVTRIPNVLVTSPTLPVKNMEELIAHAKKNPGKLSYSTSGVGNPQHLNGEL
LEELAGIHMVHIPYRGAAGQLIDVTSGTVDMTFVSYTAAKGFIQSGKVKAIAVTSARRASFAPDIPAIAEYKPLARYQLE
NWFGLFAPAGTPDAVQQKLNAAVTQALRDPELAKKLREQGGEPAPMTAQEFRDFIKTEAVQFERIVRTANITAE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33380; Mature: 33249

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGLASSAGVQAQDYPGKPITLVVPFSAGGGVDTIARLLAEKLRVSLKQSIVVDNKAGG
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCC
SGMIGAQAVVRAVPDGYTLLLGSAGETAINPFVYKGRMQYTPAKDLAPITLVTRIPNVLV
CCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECEEECCCCCCCCCCHHHHHCCCEEE
TSPTLPVKNMEELIAHAKKNPGKLSYSTSGVGNPQHLNGELLEELAGIHMVHIPYRGAAG
ECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCC
QLIDVTSGTVDMTFVSYTAAKGFIQSGKVKAIAVTSARRASFAPDIPAIAEYKPLARYQL
CEEEECCCEEEEEEHHHHHHHHHHHCCCEEEEEEECCHHCCCCCCCCCHHCCCHHHHHHH
ENWFGLFAPAGTPDAVQQKLNAAVTQALRDPELAKKLREQGGEPAPMTAQEFRDFIKTEA
HHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
VQFERIVRTANITAE
HHHHHHHHHCCCCCC
>Mature Secondary Structure 
AAGLASSAGVQAQDYPGKPITLVVPFSAGGGVDTIARLLAEKLRVSLKQSIVVDNKAGG
CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCC
SGMIGAQAVVRAVPDGYTLLLGSAGETAINPFVYKGRMQYTPAKDLAPITLVTRIPNVLV
CCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECEEECCCCCCCCCCHHHHHCCCEEE
TSPTLPVKNMEELIAHAKKNPGKLSYSTSGVGNPQHLNGELLEELAGIHMVHIPYRGAAG
ECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCC
QLIDVTSGTVDMTFVSYTAAKGFIQSGKVKAIAVTSARRASFAPDIPAIAEYKPLARYQL
CEEEECCCEEEEEEHHHHHHHHHHHCCCEEEEEEECCHHCCCCCCCCCHHCCCHHHHHHH
ENWFGLFAPAGTPDAVQQKLNAAVTQALRDPELAKKLREQGGEPAPMTAQEFRDFIKTEA
HHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
VQFERIVRTANITAE
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]