| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789705
Identifier: 91789705
GI number: 91789705
Start: 4054243
End: 4054692
Strand: Reverse
Name: 91789705
Synonym: Bpro_3863
Alternate gene names: NA
Gene position: 4054692-4054243 (Counterclockwise)
Preceding gene: 91789706
Following gene: 91789704
Centisome position: 77.97
GC content: 60.67
Gene sequence:
>450_bases ATGGACAACATCATTGTTTATATTGACGATGCCGGCTATGCCCTGCACATGCTGCAACCCATGCTGCCAGAGGGCAACGC GCGCAGTCCGACCCGCTGGATTCTGGTGGCCTGCGCACCGCGCGTGACGCACCATGCCAGCAAATGGGTAACACACAGTG CGCGGGAGAGTTGGCGCGGCAAATGGGCGGCGAAAGTATTTGCGCAACTGGTGCCTCTCCTGCAAAAAGAGGGCAATACC GTGGTGACACGGATGGCCCAGACCACATTGACCACCCAGACGGAAGCCTTGATCAAGGAACATGGCGTTGCACGTGTGCT GGACGCCCGCCGGCCCAAATTTGGCCAGGACCTGCAACCCGTCACGACCGAGCAGGCCCAGGAACACCACGACGTGCTGG GCTATGTTGCAGCGCTGGCGAGCGCGGGACTGCTTGTTGCGACAGACTGA
Upstream 100 bases:
>100_bases ATTGAAAGTGAAAGGCATCACCGAAGGCCACTGGGAGGTCCAGGGCTTTTTGTTTCACCCAGCGAAGCTTCTATAACCAC GATAACTGAAGGAGAACTTT
Downstream 100 bases:
>100_bases ATAGCCCCTCGGAATAGCCCTCGCGCTTTTCGCTTCGCGTAAGGCGTTGCCCCCGAGGGGGTTCATTTTCCTTGGGGCGG CCCGGCGGAAAATGGGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MDNIIVYIDDAGYALHMLQPMLPEGNARSPTRWILVACAPRVTHHASKWVTHSARESWRGKWAAKVFAQLVPLLQKEGNT VVTRMAQTTLTTQTEALIKEHGVARVLDARRPKFGQDLQPVTTEQAQEHHDVLGYVAALASAGLLVATD
Sequences:
>Translated_149_residues MDNIIVYIDDAGYALHMLQPMLPEGNARSPTRWILVACAPRVTHHASKWVTHSARESWRGKWAAKVFAQLVPLLQKEGNT VVTRMAQTTLTTQTEALIKEHGVARVLDARRPKFGQDLQPVTTEQAQEHHDVLGYVAALASAGLLVATD >Mature_149_residues MDNIIVYIDDAGYALHMLQPMLPEGNARSPTRWILVACAPRVTHHASKWVTHSARESWRGKWAAKVFAQLVPLLQKEGNT VVTRMAQTTLTTQTEALIKEHGVARVLDARRPKFGQDLQPVTTEQAQEHHDVLGYVAALASAGLLVATD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16473; Mature: 16473
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNIIVYIDDAGYALHMLQPMLPEGNARSPTRWILVACAPRVTHHASKWVTHSARESWRG CCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC KWAAKVFAQLVPLLQKEGNTVVTRMAQTTLTTQTEALIKEHGVARVLDARRPKFGQDLQP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC VTTEQAQEHHDVLGYVAALASAGLLVATD CCHHHHHHHHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure MDNIIVYIDDAGYALHMLQPMLPEGNARSPTRWILVACAPRVTHHASKWVTHSARESWRG CCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC KWAAKVFAQLVPLLQKEGNTVVTRMAQTTLTTQTEALIKEHGVARVLDARRPKFGQDLQP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC VTTEQAQEHHDVLGYVAALASAGLLVATD CCHHHHHHHHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA