Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789696

Identifier: 91789696

GI number: 91789696

Start: 4045195

End: 4046013

Strand: Reverse

Name: 91789696

Synonym: Bpro_3852

Alternate gene names: NA

Gene position: 4046013-4045195 (Counterclockwise)

Preceding gene: 91789697

Following gene: 91789691

Centisome position: 77.8

GC content: 67.52

Gene sequence:

>819_bases
GTGAGCGGCCTGCGGGTCGATGCGGGCTGGCTGCGCGAGCTGCGCGCCAAAGCCGTTCAGCCACCCCTGCGGCCGCGCGT
GCCGCTGTGGGCGGGCGAGTCGGTGATCGGCTCGGTGGAGCCTGAATTCCTGCATCAAATCACGCTTCAACCCCTGACGG
ATGGACATCATCCGCTGTTAAAGGAGGAGCATCCGGAACGGCTCGGCTGGCGCCTGATGGGCGACGTGACGACCAGCCTG
AACCGGGTGGCCCTTGCCCTGCTTGAAGCCGGCCTGGCGGGCGCCTGGCGCAATGAACAGCTGGCGGTGCCTGACCAGCT
GGGCCATCGCAAGGGGACGGTGGAACGCGCCGCTGTCCGGCCGCTGGGCATCACCACGCTGGCCGTGCATCTGGTGGGGC
AGACGCCGGACGGCCGCTTCTGGGTGCAGCAGCGCGCTTTTGACAAGGCCAACGACCCGGGCCAGTGGGACACGCTGATG
GGTGGCATGGTGTCGGCGGCGGATACGGTAGAGACGGCGCTGGTGCGTGAAACCTGGGAAGAGGCCGGGCTGCATACGGC
CGACCTGCAGGACATGCGCTACGGCGGGCGCCTGAGCACCTGCCGCCCCTGCAGCGACGGCATGGGGGCGGGTTATGTCA
GCGAAAACATCGACTGGTACTGCTGCACCGTGCCCGAGCGGCTGGTGCCGAACAACCAGGACGGCGAGGTCGAGCAGTTT
TGCCTGATGGACGCGGGGCAATTGCTGGACGTCCTGCAGCGGGGTGAGTTCACCACCGAAGCCGCGCTGATTCTCTGCGA
TGTGCTGAAACTGCCCTGA

Upstream 100 bases:

>100_bases
TCAGGATCGCCATTGACCAGCGGTTTCCGCTGGCCGATGTGGCCGAGGCGCACCGGTCGCTCGAAGCCCGCAAGACCACG
GGCTGCACGATTCTTACCCT

Downstream 100 bases:

>100_bases
TTTCCAGTCCGCAGGCCTGTCGGGAGGGCAGGTCCGGGCTTCAGGGCTGGTCGGTCAGCACCATGGGCCGCAGGCGGTTG
GGTGCCAAGGCGCCGGCGGA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NUDIX Domain-Containing Protein; Nucleoside Diphosphate Hydrolase Protein; NTP Pyrophosphohydrolase; NUDIX Domain Family Protein; Nudix Hydrolase; NUDIX Domain-Containing; Thiamin Pyrophosphokinase; Hydrolase NUDIX Family

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSGLRVDAGWLRELRAKAVQPPLRPRVPLWAGESVIGSVEPEFLHQITLQPLTDGHHPLLKEEHPERLGWRLMGDVTTSL
NRVALALLEAGLAGAWRNEQLAVPDQLGHRKGTVERAAVRPLGITTLAVHLVGQTPDGRFWVQQRAFDKANDPGQWDTLM
GGMVSAADTVETALVRETWEEAGLHTADLQDMRYGGRLSTCRPCSDGMGAGYVSENIDWYCCTVPERLVPNNQDGEVEQF
CLMDAGQLLDVLQRGEFTTEAALILCDVLKLP

Sequences:

>Translated_272_residues
MSGLRVDAGWLRELRAKAVQPPLRPRVPLWAGESVIGSVEPEFLHQITLQPLTDGHHPLLKEEHPERLGWRLMGDVTTSL
NRVALALLEAGLAGAWRNEQLAVPDQLGHRKGTVERAAVRPLGITTLAVHLVGQTPDGRFWVQQRAFDKANDPGQWDTLM
GGMVSAADTVETALVRETWEEAGLHTADLQDMRYGGRLSTCRPCSDGMGAGYVSENIDWYCCTVPERLVPNNQDGEVEQF
CLMDAGQLLDVLQRGEFTTEAALILCDVLKLP
>Mature_271_residues
SGLRVDAGWLRELRAKAVQPPLRPRVPLWAGESVIGSVEPEFLHQITLQPLTDGHHPLLKEEHPERLGWRLMGDVTTSLN
RVALALLEAGLAGAWRNEQLAVPDQLGHRKGTVERAAVRPLGITTLAVHLVGQTPDGRFWVQQRAFDKANDPGQWDTLMG
GMVSAADTVETALVRETWEEAGLHTADLQDMRYGGRLSTCRPCSDGMGAGYVSENIDWYCCTVPERLVPNNQDGEVEQFC
LMDAGQLLDVLQRGEFTTEAALILCDVLKLP

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322602, Length=203, Percent_Identity=29.064039408867, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29992; Mature: 29860

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLRVDAGWLRELRAKAVQPPLRPRVPLWAGESVIGSVEPEFLHQITLQPLTDGHHPLL
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCC
KEEHPERLGWRLMGDVTTSLNRVALALLEAGLAGAWRNEQLAVPDQLGHRKGTVERAAVR
CCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHCC
PLGITTLAVHLVGQTPDGRFWVQQRAFDKANDPGQWDTLMGGMVSAADTVETALVRETWE
CCCHHEEEHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAGLHTADLQDMRYGGRLSTCRPCSDGMGAGYVSENIDWYCCTVPERLVPNNQDGEVEQF
HHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCHHHH
CLMDAGQLLDVLQRGEFTTEAALILCDVLKLP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGLRVDAGWLRELRAKAVQPPLRPRVPLWAGESVIGSVEPEFLHQITLQPLTDGHHPLL
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCC
KEEHPERLGWRLMGDVTTSLNRVALALLEAGLAGAWRNEQLAVPDQLGHRKGTVERAAVR
CCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHCC
PLGITTLAVHLVGQTPDGRFWVQQRAFDKANDPGQWDTLMGGMVSAADTVETALVRETWE
CCCHHEEEHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAGLHTADLQDMRYGGRLSTCRPCSDGMGAGYVSENIDWYCCTVPERLVPNNQDGEVEQF
HHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCHHHH
CLMDAGQLLDVLQRGEFTTEAALILCDVLKLP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA