Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ribF [H]

Identifier: 91789692

GI number: 91789692

Start: 4038897

End: 4039922

Strand: Direct

Name: ribF [H]

Synonym: Bpro_3848

Alternate gene names: 91789692

Gene position: 4038897-4039922 (Clockwise)

Preceding gene: 91789690

Following gene: 91789693

Centisome position: 77.67

GC content: 63.45

Gene sequence:

>1026_bases
ATGAAAGTCTTCCGTGGTTACCACCATCCCGAGCTGGCCCCCGGCTGCGCCCTGACCATCGGCAATTTCGATGGCGTGCA
CCGTGGCCACCAAGCCATGCTGGCATTGCTTAAAAATGAGGCCCAGCACCGCGGCGTGCCCAGTTGCGTGATGAGTTTTG
AGCCCCATCCCCGCGACTATTTCGCCGCGGTCGCCCGCAAACCCGAACTTGCGCCCGCGCGCATTGCCACGCTGCGCGAC
AAGCTCACCGAACTGGCGCGCTGCGGCATTGACCAGTGCGTGGTGCTGTCTTTCAATGCCCGGCTGTCCTCGCAGGCCCC
CGAGGCCTTTATCCAGGACGTGCTGGTGCAGGGCCTGGGGACAAAATACGTGCTGGTGGGCGATGATTTCCGCTTCGGCG
CCAAACGCGCGGGCGACTACGCCATGCTGGATGCGGCGGGCGAGCGCCTGGGTTTTGACGTGGCCCGCATGAACAGCTAT
GAGGTGCATGGCACCCGGGTGTCCAGTTCTGCCGTGCGGGAAGCACTCGGAGAAGGCCGGATGGACCGGGTGGCCAGCCT
GCTGGGCCGGCCTTACAGCATCTCGGGCCATGTGGTGCACGGCCGCAAACTGGGCCGCGACCTGGGTTTTCGCACGCTCA
ACCTGCGTTTTTCGCACTGGAAACCAGCCGCCAGCGGGATTTTTGCGGTCCATGTGCATGGCCTGGCCGACCAACCCCTG
CCCGGTGTCGCCAACCTGGGCATCCGGCCTTCGATCGACCCCAACGACGCCAACGGCGGACGCGTCCTGCTCGAAACCTA
TTGCCTCGAATGGCCGGCCGGCCTGGGCGCGGAGGGGGCATACGGTAAAATCATCCGCGTGGAACTGCTACACAAACTGC
ACGATGAACTGAAATACGACAGTCTGGACAGCCTGCAAGCGGGCATTGCCAAAGACTGCGACGACGCGCGGGCATTTTTT
GCCCAGGCTTTTTCGGCATCCATGCACACGGAAACCAGCCGCCAGACCACGCGAGACCGAATTTAG

Upstream 100 bases:

>100_bases
ATATACAGTGAAAACATGACAATGAGGTTTAAATCCCCCATTAACCACGTTCAAGCCACGTCCAACCGGGCTCCGGCGCT
ATGGAAACGATAATCACCCC

Downstream 100 bases:

>100_bases
ACGATCTCGTCGCCCCGGTCGCAGCCCTTCGACAGGCTCAGGGCGAGCGGCCCAGTATTCCTCCCTTTCCCCCCAACACA
GCCGTTCGGGCTGAGCCTGT

Product: bifunctional riboflavin kinase/FMN adenylyltransferase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKVFRGYHHPELAPGCALTIGNFDGVHRGHQAMLALLKNEAQHRGVPSCVMSFEPHPRDYFAAVARKPELAPARIATLRD
KLTELARCGIDQCVVLSFNARLSSQAPEAFIQDVLVQGLGTKYVLVGDDFRFGAKRAGDYAMLDAAGERLGFDVARMNSY
EVHGTRVSSSAVREALGEGRMDRVASLLGRPYSISGHVVHGRKLGRDLGFRTLNLRFSHWKPAASGIFAVHVHGLADQPL
PGVANLGIRPSIDPNDANGGRVLLETYCLEWPAGLGAEGAYGKIIRVELLHKLHDELKYDSLDSLQAGIAKDCDDARAFF
AQAFSASMHTETSRQTTRDRI

Sequences:

>Translated_341_residues
MKVFRGYHHPELAPGCALTIGNFDGVHRGHQAMLALLKNEAQHRGVPSCVMSFEPHPRDYFAAVARKPELAPARIATLRD
KLTELARCGIDQCVVLSFNARLSSQAPEAFIQDVLVQGLGTKYVLVGDDFRFGAKRAGDYAMLDAAGERLGFDVARMNSY
EVHGTRVSSSAVREALGEGRMDRVASLLGRPYSISGHVVHGRKLGRDLGFRTLNLRFSHWKPAASGIFAVHVHGLADQPL
PGVANLGIRPSIDPNDANGGRVLLETYCLEWPAGLGAEGAYGKIIRVELLHKLHDELKYDSLDSLQAGIAKDCDDARAFF
AQAFSASMHTETSRQTTRDRI
>Mature_341_residues
MKVFRGYHHPELAPGCALTIGNFDGVHRGHQAMLALLKNEAQHRGVPSCVMSFEPHPRDYFAAVARKPELAPARIATLRD
KLTELARCGIDQCVVLSFNARLSSQAPEAFIQDVLVQGLGTKYVLVGDDFRFGAKRAGDYAMLDAAGERLGFDVARMNSY
EVHGTRVSSSAVREALGEGRMDRVASLLGRPYSISGHVVHGRKLGRDLGFRTLNLRFSHWKPAASGIFAVHVHGLADQPL
PGVANLGIRPSIDPNDANGGRVLLETYCLEWPAGLGAEGAYGKIIRVELLHKLHDELKYDSLDSLQAGIAKDCDDARAFF
AQAFSASMHTETSRQTTRDRI

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=322, Percent_Identity=45.0310559006211, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 37269; Mature: 37269

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFRGYHHPELAPGCALTIGNFDGVHRGHQAMLALLKNEAQHRGVPSCVMSFEPHPRDY
CCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHH
FAAVARKPELAPARIATLRDKLTELARCGIDQCVVLSFNARLSSQAPEAFIQDVLVQGLG
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCC
TKYVLVGDDFRFGAKRAGDYAMLDAAGERLGFDVARMNSYEVHGTRVSSSAVREALGEGR
CEEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCHHHCCCEEECCCCCCHHHHHHHHCCCH
MDRVASLLGRPYSISGHVVHGRKLGRDLGFRTLNLRFSHWKPAASGIFAVHVHGLADQPL
HHHHHHHHCCCCCCCCEEEEHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCCCC
PGVANLGIRPSIDPNDANGGRVLLETYCLEWPAGLGAEGAYGKIIRVELLHKLHDELKYD
CCHHCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
SLDSLQAGIAKDCDDARAFFAQAFSASMHTETSRQTTRDRI
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCC
>Mature Secondary Structure
MKVFRGYHHPELAPGCALTIGNFDGVHRGHQAMLALLKNEAQHRGVPSCVMSFEPHPRDY
CCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHH
FAAVARKPELAPARIATLRDKLTELARCGIDQCVVLSFNARLSSQAPEAFIQDVLVQGLG
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCC
TKYVLVGDDFRFGAKRAGDYAMLDAAGERLGFDVARMNSYEVHGTRVSSSAVREALGEGR
CEEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCHHHCCCEEECCCCCCHHHHHHHHCCCH
MDRVASLLGRPYSISGHVVHGRKLGRDLGFRTLNLRFSHWKPAASGIFAVHVHGLADQPL
HHHHHHHHCCCCCCCCEEEEHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCCCC
PGVANLGIRPSIDPNDANGGRVLLETYCLEWPAGLGAEGAYGKIIRVELLHKLHDELKYD
CCHHCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
SLDSLQAGIAKDCDDARAFFAQAFSASMHTETSRQTTRDRI
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]