| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is livK [C]
Identifier: 91789683
GI number: 91789683
Start: 4030052
End: 4031245
Strand: Reverse
Name: livK [C]
Synonym: Bpro_3839
Alternate gene names: 91789683
Gene position: 4031245-4030052 (Counterclockwise)
Preceding gene: 91789684
Following gene: 91789682
Centisome position: 77.52
GC content: 60.22
Gene sequence:
>1194_bases ATGAAAAGCTTCCGCAGAACAATTTGTCTGGCGACGCTCGCCGCCGCCGCCTTGGCCATAGCGCCCGCCGCGCTGGCACA AAAGACGCCTCCGAAAACAGCACCGCAAGAAGACATCGTGTTGGGCGGCTCTATACCGCTGACGGGCGTGTTCGCCTTTG CGGGCATCGGCATTGACCAGGGCATCAAGGATTACCTGACCATTCTCAACGAGGGTGGCGGCATCAAAGGCCGCAAGGTG CGCTACGTGCCCGAGGACACCGGCTACAAGGTTGACCAGTCGATGGCGGCATTCAAGAAAATTACCAGCCAGAACAAGGT CAGCCTTTACTACGCTGACTCCACCGCGTTTGTCAAAACCGTCAACCCCGAACTGGAGCGCAACCAGAACATCCTGATGA CCGGCGCCTCGTTCGCCAAGGAAATCAGTGACGCGCAGAAGTACCCGCTGCAGTTCATGGTGGGCCCCAATTACAGCGAG ATGGTCGGCATCCTGCTGCAGTACATCGCCAAGACCAAACCCGGCGCCAAGGTCGCGCTTGTGTACTCGGACACCGAGTT CGGCCGCGACCCGGTCGACGCCGCACGGACCGAGGCCAAGAAACTGGGCCTGAACCTGGTCAGCGAAATCGTCACGCCGC CGAGCAGCGTGGACGTGTCGGCCGAGGTCATCAAGCTGCGCCGCGCGGACCCCGACTACACCATCTTTCACGGCTACGTC TCGGCACCCATTCCTGAATTCATCAACCAGGCCAAGGCCCTGAATCTCAAGACCGCGTTCATGGGCACCTTCTGGAGCAT GGACAACTCGACCGTCATGCGCATGGGCGCGAATGTCGATGGTTTTCTGGGCGTCATGCCTTACCGTTACTACTACGACA CCGAAGGCAAAGCGCCGATGCTGGAGCGCATCCGCAAGATGCGCCCCGAGTACCAGAGCACAGGCTACATGCAGGGCTTC CTGAGCGCCATGCTGCTGACCGAGGCTGCCAAACGCACGTTGGATGCGGGCAATGAGCTGACCGGCAAGAACATGAAAAC CGCGCTCAGCTCGATCCGCAATTTCGACACCGGCGGCGTCATTGGCGTGCCCTTGTCGATCAAGGGCAACTCCATTCCCG TGGGCCGCATCTACCGGGCCGACTTCAAGCAGCAGAAGATGGTGCCGGCCTCCGAGTGGATCAGTCTGCAGTAA
Upstream 100 bases:
>100_bases GCCGCATGGCCTGGCGGAGGTGTGGCGACGCATCCGCCGGCTGTTTCACCTGTGGCCCTTCCGTACCTGAACCTGCATTT AAATCAACCAGGAGACAACC
Downstream 100 bases:
>100_bases TAAATGACCACACCATGATGGAAAAAACCGTGGCAATCGACAGCAACGCCATTCTGGAAGTCAACAACATCGAGGTCGTC TACAACAAGGCGATTCAGGT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: Branched-Chain Amino Acid ABC Transporter; Fis Family Transcriptional Regulator; ABC/TRAP Transporter Component; Protein Kinase
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKSFRRTICLATLAAAALAIAPAALAQKTPPKTAPQEDIVLGGSIPLTGVFAFAGIGIDQGIKDYLTILNEGGGIKGRKV RYVPEDTGYKVDQSMAAFKKITSQNKVSLYYADSTAFVKTVNPELERNQNILMTGASFAKEISDAQKYPLQFMVGPNYSE MVGILLQYIAKTKPGAKVALVYSDTEFGRDPVDAARTEAKKLGLNLVSEIVTPPSSVDVSAEVIKLRRADPDYTIFHGYV SAPIPEFINQAKALNLKTAFMGTFWSMDNSTVMRMGANVDGFLGVMPYRYYYDTEGKAPMLERIRKMRPEYQSTGYMQGF LSAMLLTEAAKRTLDAGNELTGKNMKTALSSIRNFDTGGVIGVPLSIKGNSIPVGRIYRADFKQQKMVPASEWISLQ
Sequences:
>Translated_397_residues MKSFRRTICLATLAAAALAIAPAALAQKTPPKTAPQEDIVLGGSIPLTGVFAFAGIGIDQGIKDYLTILNEGGGIKGRKV RYVPEDTGYKVDQSMAAFKKITSQNKVSLYYADSTAFVKTVNPELERNQNILMTGASFAKEISDAQKYPLQFMVGPNYSE MVGILLQYIAKTKPGAKVALVYSDTEFGRDPVDAARTEAKKLGLNLVSEIVTPPSSVDVSAEVIKLRRADPDYTIFHGYV SAPIPEFINQAKALNLKTAFMGTFWSMDNSTVMRMGANVDGFLGVMPYRYYYDTEGKAPMLERIRKMRPEYQSTGYMQGF LSAMLLTEAAKRTLDAGNELTGKNMKTALSSIRNFDTGGVIGVPLSIKGNSIPVGRIYRADFKQQKMVPASEWISLQ >Mature_397_residues MKSFRRTICLATLAAAALAIAPAALAQKTPPKTAPQEDIVLGGSIPLTGVFAFAGIGIDQGIKDYLTILNEGGGIKGRKV RYVPEDTGYKVDQSMAAFKKITSQNKVSLYYADSTAFVKTVNPELERNQNILMTGASFAKEISDAQKYPLQFMVGPNYSE MVGILLQYIAKTKPGAKVALVYSDTEFGRDPVDAARTEAKKLGLNLVSEIVTPPSSVDVSAEVIKLRRADPDYTIFHGYV SAPIPEFINQAKALNLKTAFMGTFWSMDNSTVMRMGANVDGFLGVMPYRYYYDTEGKAPMLERIRKMRPEYQSTGYMQGF LSAMLLTEAAKRTLDAGNELTGKNMKTALSSIRNFDTGGVIGVPLSIKGNSIPVGRIYRADFKQQKMVPASEWISLQ
Specific function: This Protein Is A Component Of The Leucine-Specific Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids In E.Coli. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43405; Mature: 43405
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFRRTICLATLAAAALAIAPAALAQKTPPKTAPQEDIVLGGSIPLTGVFAFAGIGIDQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCHHC GIKDYLTILNEGGGIKGRKVRYVPEDTGYKVDQSMAAFKKITSQNKVSLYYADSTAFVKT CHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEE VNPELERNQNILMTGASFAKEISDAQKYPLQFMVGPNYSEMVGILLQYIAKTKPGAKVAL CCCHHHCCCCEEEECHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEE VYSDTEFGRDPVDAARTEAKKLGLNLVSEIVTPPSSVDVSAEVIKLRRADPDYTIFHGYV EEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCC SAPIPEFINQAKALNLKTAFMGTFWSMDNSTVMRMGANVDGFLGVMPYRYYYDTEGKAPM CCCHHHHHHHHHHCCCHHHHHHHEECCCCCEEEEECCCCCCHHCCCCEEEEECCCCCCHH LERIRKMRPEYQSTGYMQGFLSAMLLTEAAKRTLDAGNELTGKNMKTALSSIRNFDTGGV HHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCE IGVPLSIKGNSIPVGRIYRADFKQQKMVPASEWISLQ EEEEEEECCCCCCCCHHHHCCHHHHCCCCHHHCCCCC >Mature Secondary Structure MKSFRRTICLATLAAAALAIAPAALAQKTPPKTAPQEDIVLGGSIPLTGVFAFAGIGIDQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCHHC GIKDYLTILNEGGGIKGRKVRYVPEDTGYKVDQSMAAFKKITSQNKVSLYYADSTAFVKT CHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEE VNPELERNQNILMTGASFAKEISDAQKYPLQFMVGPNYSEMVGILLQYIAKTKPGAKVAL CCCHHHCCCCEEEECHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEE VYSDTEFGRDPVDAARTEAKKLGLNLVSEIVTPPSSVDVSAEVIKLRRADPDYTIFHGYV EEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCC SAPIPEFINQAKALNLKTAFMGTFWSMDNSTVMRMGANVDGFLGVMPYRYYYDTEGKAPM CCCHHHHHHHHHHCCCHHHHHHHEECCCCCEEEEECCCCCCHHCCCCEEEEECCCCCCHH LERIRKMRPEYQSTGYMQGFLSAMLLTEAAKRTLDAGNELTGKNMKTALSSIRNFDTGGV HHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCE IGVPLSIKGNSIPVGRIYRADFKQQKMVPASEWISLQ EEEEEEECCCCCCCCHHHHCCHHHHCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA