Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is livK [C]

Identifier: 91789683

GI number: 91789683

Start: 4030052

End: 4031245

Strand: Reverse

Name: livK [C]

Synonym: Bpro_3839

Alternate gene names: 91789683

Gene position: 4031245-4030052 (Counterclockwise)

Preceding gene: 91789684

Following gene: 91789682

Centisome position: 77.52

GC content: 60.22

Gene sequence:

>1194_bases
ATGAAAAGCTTCCGCAGAACAATTTGTCTGGCGACGCTCGCCGCCGCCGCCTTGGCCATAGCGCCCGCCGCGCTGGCACA
AAAGACGCCTCCGAAAACAGCACCGCAAGAAGACATCGTGTTGGGCGGCTCTATACCGCTGACGGGCGTGTTCGCCTTTG
CGGGCATCGGCATTGACCAGGGCATCAAGGATTACCTGACCATTCTCAACGAGGGTGGCGGCATCAAAGGCCGCAAGGTG
CGCTACGTGCCCGAGGACACCGGCTACAAGGTTGACCAGTCGATGGCGGCATTCAAGAAAATTACCAGCCAGAACAAGGT
CAGCCTTTACTACGCTGACTCCACCGCGTTTGTCAAAACCGTCAACCCCGAACTGGAGCGCAACCAGAACATCCTGATGA
CCGGCGCCTCGTTCGCCAAGGAAATCAGTGACGCGCAGAAGTACCCGCTGCAGTTCATGGTGGGCCCCAATTACAGCGAG
ATGGTCGGCATCCTGCTGCAGTACATCGCCAAGACCAAACCCGGCGCCAAGGTCGCGCTTGTGTACTCGGACACCGAGTT
CGGCCGCGACCCGGTCGACGCCGCACGGACCGAGGCCAAGAAACTGGGCCTGAACCTGGTCAGCGAAATCGTCACGCCGC
CGAGCAGCGTGGACGTGTCGGCCGAGGTCATCAAGCTGCGCCGCGCGGACCCCGACTACACCATCTTTCACGGCTACGTC
TCGGCACCCATTCCTGAATTCATCAACCAGGCCAAGGCCCTGAATCTCAAGACCGCGTTCATGGGCACCTTCTGGAGCAT
GGACAACTCGACCGTCATGCGCATGGGCGCGAATGTCGATGGTTTTCTGGGCGTCATGCCTTACCGTTACTACTACGACA
CCGAAGGCAAAGCGCCGATGCTGGAGCGCATCCGCAAGATGCGCCCCGAGTACCAGAGCACAGGCTACATGCAGGGCTTC
CTGAGCGCCATGCTGCTGACCGAGGCTGCCAAACGCACGTTGGATGCGGGCAATGAGCTGACCGGCAAGAACATGAAAAC
CGCGCTCAGCTCGATCCGCAATTTCGACACCGGCGGCGTCATTGGCGTGCCCTTGTCGATCAAGGGCAACTCCATTCCCG
TGGGCCGCATCTACCGGGCCGACTTCAAGCAGCAGAAGATGGTGCCGGCCTCCGAGTGGATCAGTCTGCAGTAA

Upstream 100 bases:

>100_bases
GCCGCATGGCCTGGCGGAGGTGTGGCGACGCATCCGCCGGCTGTTTCACCTGTGGCCCTTCCGTACCTGAACCTGCATTT
AAATCAACCAGGAGACAACC

Downstream 100 bases:

>100_bases
TAAATGACCACACCATGATGGAAAAAACCGTGGCAATCGACAGCAACGCCATTCTGGAAGTCAACAACATCGAGGTCGTC
TACAACAAGGCGATTCAGGT

Product: extracellular ligand-binding receptor

Products: ADP; phosphate; L-leucine [Cytoplasm] [C]

Alternate protein names: Branched-Chain Amino Acid ABC Transporter; Fis Family Transcriptional Regulator; ABC/TRAP Transporter Component; Protein Kinase

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKSFRRTICLATLAAAALAIAPAALAQKTPPKTAPQEDIVLGGSIPLTGVFAFAGIGIDQGIKDYLTILNEGGGIKGRKV
RYVPEDTGYKVDQSMAAFKKITSQNKVSLYYADSTAFVKTVNPELERNQNILMTGASFAKEISDAQKYPLQFMVGPNYSE
MVGILLQYIAKTKPGAKVALVYSDTEFGRDPVDAARTEAKKLGLNLVSEIVTPPSSVDVSAEVIKLRRADPDYTIFHGYV
SAPIPEFINQAKALNLKTAFMGTFWSMDNSTVMRMGANVDGFLGVMPYRYYYDTEGKAPMLERIRKMRPEYQSTGYMQGF
LSAMLLTEAAKRTLDAGNELTGKNMKTALSSIRNFDTGGVIGVPLSIKGNSIPVGRIYRADFKQQKMVPASEWISLQ

Sequences:

>Translated_397_residues
MKSFRRTICLATLAAAALAIAPAALAQKTPPKTAPQEDIVLGGSIPLTGVFAFAGIGIDQGIKDYLTILNEGGGIKGRKV
RYVPEDTGYKVDQSMAAFKKITSQNKVSLYYADSTAFVKTVNPELERNQNILMTGASFAKEISDAQKYPLQFMVGPNYSE
MVGILLQYIAKTKPGAKVALVYSDTEFGRDPVDAARTEAKKLGLNLVSEIVTPPSSVDVSAEVIKLRRADPDYTIFHGYV
SAPIPEFINQAKALNLKTAFMGTFWSMDNSTVMRMGANVDGFLGVMPYRYYYDTEGKAPMLERIRKMRPEYQSTGYMQGF
LSAMLLTEAAKRTLDAGNELTGKNMKTALSSIRNFDTGGVIGVPLSIKGNSIPVGRIYRADFKQQKMVPASEWISLQ
>Mature_397_residues
MKSFRRTICLATLAAAALAIAPAALAQKTPPKTAPQEDIVLGGSIPLTGVFAFAGIGIDQGIKDYLTILNEGGGIKGRKV
RYVPEDTGYKVDQSMAAFKKITSQNKVSLYYADSTAFVKTVNPELERNQNILMTGASFAKEISDAQKYPLQFMVGPNYSE
MVGILLQYIAKTKPGAKVALVYSDTEFGRDPVDAARTEAKKLGLNLVSEIVTPPSSVDVSAEVIKLRRADPDYTIFHGYV
SAPIPEFINQAKALNLKTAFMGTFWSMDNSTVMRMGANVDGFLGVMPYRYYYDTEGKAPMLERIRKMRPEYQSTGYMQGF
LSAMLLTEAAKRTLDAGNELTGKNMKTALSSIRNFDTGGVIGVPLSIKGNSIPVGRIYRADFKQQKMVPASEWISLQ

Specific function: This Protein Is A Component Of The Leucine-Specific Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids In E.Coli. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43405; Mature: 43405

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFRRTICLATLAAAALAIAPAALAQKTPPKTAPQEDIVLGGSIPLTGVFAFAGIGIDQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCHHC
GIKDYLTILNEGGGIKGRKVRYVPEDTGYKVDQSMAAFKKITSQNKVSLYYADSTAFVKT
CHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEE
VNPELERNQNILMTGASFAKEISDAQKYPLQFMVGPNYSEMVGILLQYIAKTKPGAKVAL
CCCHHHCCCCEEEECHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEE
VYSDTEFGRDPVDAARTEAKKLGLNLVSEIVTPPSSVDVSAEVIKLRRADPDYTIFHGYV
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCC
SAPIPEFINQAKALNLKTAFMGTFWSMDNSTVMRMGANVDGFLGVMPYRYYYDTEGKAPM
CCCHHHHHHHHHHCCCHHHHHHHEECCCCCEEEEECCCCCCHHCCCCEEEEECCCCCCHH
LERIRKMRPEYQSTGYMQGFLSAMLLTEAAKRTLDAGNELTGKNMKTALSSIRNFDTGGV
HHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCE
IGVPLSIKGNSIPVGRIYRADFKQQKMVPASEWISLQ
EEEEEEECCCCCCCCHHHHCCHHHHCCCCHHHCCCCC
>Mature Secondary Structure
MKSFRRTICLATLAAAALAIAPAALAQKTPPKTAPQEDIVLGGSIPLTGVFAFAGIGIDQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCHHC
GIKDYLTILNEGGGIKGRKVRYVPEDTGYKVDQSMAAFKKITSQNKVSLYYADSTAFVKT
CHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCEEEEE
VNPELERNQNILMTGASFAKEISDAQKYPLQFMVGPNYSEMVGILLQYIAKTKPGAKVAL
CCCHHHCCCCEEEECHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEE
VYSDTEFGRDPVDAARTEAKKLGLNLVSEIVTPPSSVDVSAEVIKLRRADPDYTIFHGYV
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCC
SAPIPEFINQAKALNLKTAFMGTFWSMDNSTVMRMGANVDGFLGVMPYRYYYDTEGKAPM
CCCHHHHHHHHHHCCCHHHHHHHEECCCCCEEEEECCCCCCHHCCCCEEEEECCCCCCHH
LERIRKMRPEYQSTGYMQGFLSAMLLTEAAKRTLDAGNELTGKNMKTALSSIRNFDTGGV
HHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCE
IGVPLSIKGNSIPVGRIYRADFKQQKMVPASEWISLQ
EEEEEEECCCCCCCCHHHHCCHHHHCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-leucine [Periplasm]; H2O [C]

Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA