| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789657
Identifier: 91789657
GI number: 91789657
Start: 4002359
End: 4002781
Strand: Direct
Name: 91789657
Synonym: Bpro_3813
Alternate gene names: NA
Gene position: 4002359-4002781 (Clockwise)
Preceding gene: 91789655
Following gene: 91789658
Centisome position: 76.96
GC content: 59.81
Gene sequence:
>423_bases ATGCCCCCCGTTCCTCCGTTCCATCTTGCGTTTCCCGTGCGGGATCTTTCAGAGGCTCGCCGCTTTTACGGCGAGCTTCT CGGATGTGCCGAGGGGCGCAGCTCCCCTGACTGGGTGGATTTCAATTTCTTTGGCCATCAGCTTGTTGCCCACCTGGCAC CTGGCGAGTGCGGCCATCGCAGCACCAGTGAGGTGGATGGGCATCAAGTGCCCGTCCGGCATTTCGGTGCCGTCCTGCCC ATGAAGGACTGGGAAGCATTGGCGGCCCGCCTCGGGACCGAAGGCATGCATTTTGAAATTGAACCGCAGATCAGGTTCAA GGGGCAGGTTGGCGAGCAGGCCACGATGTTCTTTCTGGACCCGTCGGGCAATGCGCTGGAATTCAAGGCTTTCGCCGACA TCAGCCAGCTCTTTGCCAAATGA
Upstream 100 bases:
>100_bases CGGCCCGGAAATGCGCTGGTCGCTGACTGACGGACGGATGCTTCAAAAGTGCAACCACCAGCGTCTACCGACAACTAGCC ACAACTACTCAAGGAATTTC
Downstream 100 bases:
>100_bases CCCGTCATTGGAGACCGCCAATATGCCCGGATTCGTGATCTGCAACCCGGTGACGAGGTGTGCGGTGGCATCCAGGGGGT TGCCGATTTCAGCTTCGTCG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Dioxygenase; Extradiol Dioxygenase Family Protein; Dioxygenase/Glyoxalase; Glyoxalase Domain Protein; Glyoxalase/Extradiol Ring-Cleavage Dioxygenase; Glyoxalase/Bleomycin Resistance Family Protein; Dioxygenase Of Extradiol Dioxygenase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Extradiol Family Dioxygenase; Extradiol Dioxygenase; Lactoylglutathione Lyase Protein
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPPVPPFHLAFPVRDLSEARRFYGELLGCAEGRSSPDWVDFNFFGHQLVAHLAPGECGHRSTSEVDGHQVPVRHFGAVLP MKDWEALAARLGTEGMHFEIEPQIRFKGQVGEQATMFFLDPSGNALEFKAFADISQLFAK
Sequences:
>Translated_140_residues MPPVPPFHLAFPVRDLSEARRFYGELLGCAEGRSSPDWVDFNFFGHQLVAHLAPGECGHRSTSEVDGHQVPVRHFGAVLP MKDWEALAARLGTEGMHFEIEPQIRFKGQVGEQATMFFLDPSGNALEFKAFADISQLFAK >Mature_139_residues PPVPPFHLAFPVRDLSEARRFYGELLGCAEGRSSPDWVDFNFFGHQLVAHLAPGECGHRSTSEVDGHQVPVRHFGAVLPM KDWEALAARLGTEGMHFEIEPQIRFKGQVGEQATMFFLDPSGNALEFKAFADISQLFAK
Specific function: Unknown
COG id: COG3565
COG function: function code R; Predicted dioxygenase of extradiol dioxygenase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15598; Mature: 15467
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVPPFHLAFPVRDLSEARRFYGELLGCAEGRSSPDWVDFNFFGHQLVAHLAPGECGHR CCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCC STSEVDGHQVPVRHFGAVLPMKDWEALAARLGTEGMHFEIEPQIRFKGQVGEQATMFFLD CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCEEECCCCCCCEEEEEEC PSGNALEFKAFADISQLFAK CCCCEEEEHHHHHHHHHHCC >Mature Secondary Structure PPVPPFHLAFPVRDLSEARRFYGELLGCAEGRSSPDWVDFNFFGHQLVAHLAPGECGHR CCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCC STSEVDGHQVPVRHFGAVLPMKDWEALAARLGTEGMHFEIEPQIRFKGQVGEQATMFFLD CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCEEECCCCCCCEEEEEEC PSGNALEFKAFADISQLFAK CCCCEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA