| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is traR [C]
Identifier: 91789623
GI number: 91789623
Start: 3967408
End: 3967647
Strand: Direct
Name: traR [C]
Synonym: Bpro_3778
Alternate gene names: 91789623
Gene position: 3967408-3967647 (Clockwise)
Preceding gene: 91789622
Following gene: 91789624
Centisome position: 76.29
GC content: 61.25
Gene sequence:
>240_bases ATGCCAGATGACTTTGACCGGGCGCAGCAGACTGAACAGATGTTCCGCGACGACGCCTTACGCGACCAGGCGCTTCGCTT TCAGCCGGGCGACCCAACCAGGTGGCAGGGCCTTTCGGCTCTGCGTTGCCTTTATGACGGATGCGGTGAGCCCATCCCTG AACAGCGGCGCAAGGCGCTGCCAGGCGTGAAGTTTTGTGTTGAGTGCCAGCAGCGGCTGGAAAAAAAGGGGATGCGGTGA
Upstream 100 bases:
>100_bases TGCCTGCGCGATGCCCACCAGTTCGAGTTTGGCTCCAGCCGGGGCAGCCGCGAAAAAGACGACCTGCTTGCCAACATGCA GCAAGGGCGGAAGTGAGCCG
Downstream 100 bases:
>100_bases AAGTTGAATTTGAGTTATGGCAACTGATCAGCCTCATGGTCGCGGTGGTGGGCGGGTTCTGGGCAATGGCCAAGATGCTG ATCACTCAAACCAAAGAGCA
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MPDDFDRAQQTEQMFRDDALRDQALRFQPGDPTRWQGLSALRCLYDGCGEPIPEQRRKALPGVKFCVECQQRLEKKGMR
Sequences:
>Translated_79_residues MPDDFDRAQQTEQMFRDDALRDQALRFQPGDPTRWQGLSALRCLYDGCGEPIPEQRRKALPGVKFCVECQQRLEKKGMR >Mature_78_residues PDDFDRAQQTEQMFRDDALRDQALRFQPGDPTRWQGLSALRCLYDGCGEPIPEQRRKALPGVKFCVECQQRLEKKGMR
Specific function: Unknown. [C]
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9230; Mature: 9098
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDDFDRAQQTEQMFRDDALRDQALRFQPGDPTRWQGLSALRCLYDGCGEPIPEQRRKAL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHC PGVKFCVECQQRLEKKGMR CHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PDDFDRAQQTEQMFRDDALRDQALRFQPGDPTRWQGLSALRCLYDGCGEPIPEQRRKAL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHC PGVKFCVECQQRLEKKGMR CHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA