| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789617
Identifier: 91789617
GI number: 91789617
Start: 3965001
End: 3965375
Strand: Direct
Name: 91789617
Synonym: Bpro_3772
Alternate gene names: NA
Gene position: 3965001-3965375 (Clockwise)
Preceding gene: 91789616
Following gene: 91789618
Centisome position: 76.25
GC content: 56.0
Gene sequence:
>375_bases ATGAGCCAGAGCCAGATACAAGACGACGACCAATACCCGGAGCTGCTCAGCGACATTGCCCAGCAGGTGAAGGTGCGGCT GTCCACCCTGGTCAACGAAAAGCAGGCGCTGGACGTTGAAAGGGCCAAGCAGATAGGCTGGGAAGTGGCAGAGCACGTGC GCGCGCACTTTGCCGGGGAGTTGATCTATATTCCAAAAGGCCGACAATTCGAGGCCAGCCAGCTGCACCAGGCCATTTGG GACAAGTTCAACGGCCACAACATTCCCGAGCTGGTGGGCGAGTTCAAGATGGCCGAGCAGTCGATTTACCGGGTTATAAA ATTCATGCGGGCACGCAACGTGCGCCGGAATCAACTTTCACTTATTGAGGATTGA
Upstream 100 bases:
>100_bases CCGACGTGCCGCAACTGCCCGCCCCCAAGGGCGACCGCGAGAAGATCAGGGCCTACCAGGCGCAGGCGCGAGAACTTTTA ACCAAATGGAAAGCCAAGCC
Downstream 100 bases:
>100_bases TCATGCTTAAAAAGGCAGCTGCAGATTTCTGGAACAGGCTCGACACCAAGGGGCGCGACCTGGTCAAGGGCATAGCCGGC GTGCTGGTGCTGGCGGCCGT
Product: prophage MuMc02, transcriptional regulator
Products: NA
Alternate protein names: Bacteriophage Transcriptional Regulator; Phage Regulatory Protein
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSQSQIQDDDQYPELLSDIAQQVKVRLSTLVNEKQALDVERAKQIGWEVAEHVRAHFAGELIYIPKGRQFEASQLHQAIW DKFNGHNIPELVGEFKMAEQSIYRVIKFMRARNVRRNQLSLIED
Sequences:
>Translated_124_residues MSQSQIQDDDQYPELLSDIAQQVKVRLSTLVNEKQALDVERAKQIGWEVAEHVRAHFAGELIYIPKGRQFEASQLHQAIW DKFNGHNIPELVGEFKMAEQSIYRVIKFMRARNVRRNQLSLIED >Mature_123_residues SQSQIQDDDQYPELLSDIAQQVKVRLSTLVNEKQALDVERAKQIGWEVAEHVRAHFAGELIYIPKGRQFEASQLHQAIWD KFNGHNIPELVGEFKMAEQSIYRVIKFMRARNVRRNQLSLIED
Specific function: Unknown
COG id: COG5566
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14477; Mature: 14345
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSQIQDDDQYPELLSDIAQQVKVRLSTLVNEKQALDVERAKQIGWEVAEHVRAHFAGE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LIYIPKGRQFEASQLHQAIWDKFNGHNIPELVGEFKMAEQSIYRVIKFMRARNVRRNQLS EEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LIED HCCC >Mature Secondary Structure SQSQIQDDDQYPELLSDIAQQVKVRLSTLVNEKQALDVERAKQIGWEVAEHVRAHFAGE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LIYIPKGRQFEASQLHQAIWDKFNGHNIPELVGEFKMAEQSIYRVIKFMRARNVRRNQLS EEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LIED HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA