| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789588
Identifier: 91789588
GI number: 91789588
Start: 3947887
End: 3948495
Strand: Reverse
Name: 91789588
Synonym: Bpro_3743
Alternate gene names: NA
Gene position: 3948495-3947887 (Counterclockwise)
Preceding gene: 91789589
Following gene: 91789587
Centisome position: 75.93
GC content: 64.2
Gene sequence:
>609_bases ATGAGCATCACCAGCGCTGAAGACAACATCATTGCCCAGATCAAGACTGTGATGGGCAACAAGGTGCGCGCGGTGGAGTC GCTGCCGGGTAACTGGGACGACGACACCCTCAAGCGCCTGCTGCGCCTGCTGCCGGGCATCTTCCTGGTGTGGGGCGGTG GCCAGGTGCAGGAGCGCAACGCGGGTGTGGGCGGCTTGGTTGTGGGCAGCTGGATTGTCTATGTGATCACCGGCCACGCC AGCGGTGAGGCTGCGCGCCGCCGTGGCGATGGCCAGCAGGCCGGGGCCTACGAGCTGCTGCAGCTGCTGATACCGCTGCT CAACGGCTACACCGTGCCGGGCGAAGGCACGCTGAGCCTGCAGCGCGTTGAAAACCTGTACAGCGGCAGTGTTGACCGCC AGGGCGTGACGGTTTACGCCTGCAGCTTCAACATGCCCCAGGCGTGGCCTACCGAGGTTGACATGAACCTGCTGACGCCG TTCCAGACCTTTGACGCCCAGTACGACACGCCGCCGCTGACAACCGAAGCCGAACACCAGAAGTGGCTGGACGGTAACTA CGGCACCACCAAACCCGATGCACACGACACCGTCGCTGTGCCGCAGTAA
Upstream 100 bases:
>100_bases GCATCAACGTGGCCAACCAGGTGACGCCCGAGGCAGGCGGCGCATCGAGTTTCGGCAACGACCGTGTGTTTACGGCTGAC TCGCTCGGGGACTACTGACC
Downstream 100 bases:
>100_bases GGACCAACATGAGCACCAACGAACAGCAGCTTGAAAAGAGCCTGCAGGACCTGAAACCAACCGCCCCGCGGTTGACCCCT GCAGACATCGACAAAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSITSAEDNIIAQIKTVMGNKVRAVESLPGNWDDDTLKRLLRLLPGIFLVWGGGQVQERNAGVGGLVVGSWIVYVITGHA SGEAARRRGDGQQAGAYELLQLLIPLLNGYTVPGEGTLSLQRVENLYSGSVDRQGVTVYACSFNMPQAWPTEVDMNLLTP FQTFDAQYDTPPLTTEAEHQKWLDGNYGTTKPDAHDTVAVPQ
Sequences:
>Translated_202_residues MSITSAEDNIIAQIKTVMGNKVRAVESLPGNWDDDTLKRLLRLLPGIFLVWGGGQVQERNAGVGGLVVGSWIVYVITGHA SGEAARRRGDGQQAGAYELLQLLIPLLNGYTVPGEGTLSLQRVENLYSGSVDRQGVTVYACSFNMPQAWPTEVDMNLLTP FQTFDAQYDTPPLTTEAEHQKWLDGNYGTTKPDAHDTVAVPQ >Mature_201_residues SITSAEDNIIAQIKTVMGNKVRAVESLPGNWDDDTLKRLLRLLPGIFLVWGGGQVQERNAGVGGLVVGSWIVYVITGHAS GEAARRRGDGQQAGAYELLQLLIPLLNGYTVPGEGTLSLQRVENLYSGSVDRQGVTVYACSFNMPQAWPTEVDMNLLTPF QTFDAQYDTPPLTTEAEHQKWLDGNYGTTKPDAHDTVAVPQ
Specific function: Unknown
COG id: COG5003
COG function: function code R; Mu-like prophage protein gp37
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein gp37 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014972 [H]
Pfam domain/function: PF08873 DUF1834 [H]
EC number: NA
Molecular weight: Translated: 21988; Mature: 21857
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITSAEDNIIAQIKTVMGNKVRAVESLPGNWDDDTLKRLLRLLPGIFLVWGGGQVQERN CCCCCCCCHHHHHHHHHHCCHHEEHHCCCCCCCHHHHHHHHHHCCCEEEEECCCEEECCC AGVGGLVVGSWIVYVITGHASGEAARRRGDGQQAGAYELLQLLIPLLNGYTVPGEGTLSL CCCCHHHHHCEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH QRVENLYSGSVDRQGVTVYACSFNMPQAWPTEVDMNLLTPFQTFDAQYDTPPLTTEAEHQ HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCHHHH KWLDGNYGTTKPDAHDTVAVPQ HHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SITSAEDNIIAQIKTVMGNKVRAVESLPGNWDDDTLKRLLRLLPGIFLVWGGGQVQERN CCCCCCCHHHHHHHHHHCCHHEEHHCCCCCCCHHHHHHHHHHCCCEEEEECCCEEECCC AGVGGLVVGSWIVYVITGHASGEAARRRGDGQQAGAYELLQLLIPLLNGYTVPGEGTLSL CCCCHHHHHCEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH QRVENLYSGSVDRQGVTVYACSFNMPQAWPTEVDMNLLTPFQTFDAQYDTPPLTTEAEHQ HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCHHHH KWLDGNYGTTKPDAHDTVAVPQ HHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]