Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789583

Identifier: 91789583

GI number: 91789583

Start: 3943465

End: 3945087

Strand: Reverse

Name: 91789583

Synonym: Bpro_3738

Alternate gene names: NA

Gene position: 3945087-3943465 (Counterclockwise)

Preceding gene: 91789584

Following gene: 91789582

Centisome position: 75.86

GC content: 60.75

Gene sequence:

>1623_bases
ATGAGCACAGGCAATCTCAAGCTGGCATTCGTGATAGAGGCTCTGGACAAAGCGACAGAGCCTCTTCGCCGCGTTGGCCG
TGCCATTGACAAGGTGGCTGAGCCGATCAAGCGCATCGGCGCGCTGTCTGACCAGACGGCGTTTCGCTTTGGGCGCTTCA
TGGGCAACCGGCTGCAGAACCAGATGGGTGTGGTGCGTGAGCGCTTCGATACCTTGAAGGGCAGCGCCCAGGGCATTGCG
CAGGGCTTTGGTGCCGTCAGCCTGGCTGCGGGCGGTGTGTTTTTTGCGCTGAAGCGGACGATTGACGCAACTGACCACGC
GGTGGATGTCAGCAAGAAGCTGGGCATTGGCGTGGAGGCATACCAGCGTATGGGCTACGCGGCGCAGCTCAATGGCAGCA
ACCAGGAAGAAATGGGCCAGGCGCTGCAGTTCTTGAGCCAGAACATGGTGGAGGCGATCAATGGCAGCAAGGAGGCCGCC
ACCTGGTTCGCCCGCGTGGGCATCCCGCTTGACCAGCTCAAGAAGATGAACGTGGCCCAGGTGTTTGAAAAGGTGGCCGA
CAAGTTCCAGTCTGTGGGCGACGCCGGCCAGAACGCCGAGAAAAAGATTGCCGTGATGAAGGCCCTGATGGGCCGTGGCG
GTGCCGAGCTGAAACAGGTGCTTGACCTGGGCAGCGCTGGCCTGAAGACCTTCTACAAGGAAGCCGACAAGGTTGGCGCG
GTGGTCGGTGGATCCACCGCTGAGGCAATGGCTGACTTCAATGACAACTTCGACCGCCTGAAGTTCTCGATTTTTGGCGT
CATGTCGGCCATTGCGGAAAACGCGCTGCCGGCACTGGACGCAATGGTGAAGAAGTTCACGGAGATCAACTCGGCCAACC
GCGAAGAGTGGGGCCAGCGCCTGGGCAAGATGATTGGCGAGATCGTCAACGCGCTGCCCGGTTTCTTGAAGTCGCTGGGC
CAGATCACCGGGGCCCTGGTGATGATTGTCGGTGCTGCTGACACCGTGGCGCAGGTCTTTGGTGGTTGGGAGAACGTGAT
CATCGGCCTTGCCGCGCTGCTTGGCTTGAAGCTGGCTGTTGGCATCTTTGGCCTCGGCAAGGCCATCATCGCCTTGATCC
CCACGGTGTGGAGCCTGGGCGTTGCGCTTATGTCGACGCCCGTGGGCTGGATTCTGTTGGCTGTTGCAGCCATCGCGGGC
ATCGTGTTCCTGATCTACAAGAACTGGGCACCTATCAAGCAGTTCTTCATCGGCCTGTGGGACGGCGTTAAATCGGCTTT
CAGCACGGTTTACGACTGGATCATGAACAAGATCATGACGGTGGTCGAGCTGGCCGCCAAGGTGGGCCAGACCGTCAAAA
ACCTGTTCAGCGGTGAGATGAACGGCTCGGTGACCTATGACGCGATGGGGAACGCCACGGGCGTTGCCGATGCGCCCCTG
GCCATTGCGCCGCCCGTGCCCTCCGCCCTGCCCACCCGCAACATGATGCAAAAGGCTGACGTGGGCGGCACGATCAAGCT
GCAGATCGACCAGGACGGCCGCGCCCGCGTGGCAGAGGTCAAGAAGAACAACCCGGCTGTGGACTTTGACGTTTACAGCG
GCATGGTGATGGCGACGCCATGA

Upstream 100 bases:

>100_bases
TCACGTTTCACTGGTCAAACAGAGAGCTGATGGCGATGGACATCGACGAGCTGATGGAGTGGCACCAGCAGGTAAGCCGA
ATTAACAAACACTTGAATAA

Downstream 100 bases:

>100_bases
GCTGGTTAGACGAACTTCAGCTGGCGAGCTTTCGCGGCGTTCCCTTCTTTGTGGACAGCGCGGAGCTGGGCTTTGGCCGC
CGTAGCGTGGTGCATGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage-Related Tail Protein; Tail Length Tape Measure Protein; Tail Length Phage Protein; Phage Tail Length Tape Measure Protein; Phage Tail Tape Measure Protein

Number of amino acids: Translated: 540; Mature: 539

Protein sequence:

>540_residues
MSTGNLKLAFVIEALDKATEPLRRVGRAIDKVAEPIKRIGALSDQTAFRFGRFMGNRLQNQMGVVRERFDTLKGSAQGIA
QGFGAVSLAAGGVFFALKRTIDATDHAVDVSKKLGIGVEAYQRMGYAAQLNGSNQEEMGQALQFLSQNMVEAINGSKEAA
TWFARVGIPLDQLKKMNVAQVFEKVADKFQSVGDAGQNAEKKIAVMKALMGRGGAELKQVLDLGSAGLKTFYKEADKVGA
VVGGSTAEAMADFNDNFDRLKFSIFGVMSAIAENALPALDAMVKKFTEINSANREEWGQRLGKMIGEIVNALPGFLKSLG
QITGALVMIVGAADTVAQVFGGWENVIIGLAALLGLKLAVGIFGLGKAIIALIPTVWSLGVALMSTPVGWILLAVAAIAG
IVFLIYKNWAPIKQFFIGLWDGVKSAFSTVYDWIMNKIMTVVELAAKVGQTVKNLFSGEMNGSVTYDAMGNATGVADAPL
AIAPPVPSALPTRNMMQKADVGGTIKLQIDQDGRARVAEVKKNNPAVDFDVYSGMVMATP

Sequences:

>Translated_540_residues
MSTGNLKLAFVIEALDKATEPLRRVGRAIDKVAEPIKRIGALSDQTAFRFGRFMGNRLQNQMGVVRERFDTLKGSAQGIA
QGFGAVSLAAGGVFFALKRTIDATDHAVDVSKKLGIGVEAYQRMGYAAQLNGSNQEEMGQALQFLSQNMVEAINGSKEAA
TWFARVGIPLDQLKKMNVAQVFEKVADKFQSVGDAGQNAEKKIAVMKALMGRGGAELKQVLDLGSAGLKTFYKEADKVGA
VVGGSTAEAMADFNDNFDRLKFSIFGVMSAIAENALPALDAMVKKFTEINSANREEWGQRLGKMIGEIVNALPGFLKSLG
QITGALVMIVGAADTVAQVFGGWENVIIGLAALLGLKLAVGIFGLGKAIIALIPTVWSLGVALMSTPVGWILLAVAAIAG
IVFLIYKNWAPIKQFFIGLWDGVKSAFSTVYDWIMNKIMTVVELAAKVGQTVKNLFSGEMNGSVTYDAMGNATGVADAPL
AIAPPVPSALPTRNMMQKADVGGTIKLQIDQDGRARVAEVKKNNPAVDFDVYSGMVMATP
>Mature_539_residues
STGNLKLAFVIEALDKATEPLRRVGRAIDKVAEPIKRIGALSDQTAFRFGRFMGNRLQNQMGVVRERFDTLKGSAQGIAQ
GFGAVSLAAGGVFFALKRTIDATDHAVDVSKKLGIGVEAYQRMGYAAQLNGSNQEEMGQALQFLSQNMVEAINGSKEAAT
WFARVGIPLDQLKKMNVAQVFEKVADKFQSVGDAGQNAEKKIAVMKALMGRGGAELKQVLDLGSAGLKTFYKEADKVGAV
VGGSTAEAMADFNDNFDRLKFSIFGVMSAIAENALPALDAMVKKFTEINSANREEWGQRLGKMIGEIVNALPGFLKSLGQ
ITGALVMIVGAADTVAQVFGGWENVIIGLAALLGLKLAVGIFGLGKAIIALIPTVWSLGVALMSTPVGWILLAVAAIAGI
VFLIYKNWAPIKQFFIGLWDGVKSAFSTVYDWIMNKIMTVVELAAKVGQTVKNLFSGEMNGSVTYDAMGNATGVADAPLA
IAPPVPSALPTRNMMQKADVGGTIKLQIDQDGRARVAEVKKNNPAVDFDVYSGMVMATP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57456; Mature: 57324

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure 
STGNLKLAFVIEALDKATEPLRRVGRAIDKVAEPIKRIGALSDQTAFRFGRFMGNRLQN
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA