Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ycfK [C]

Identifier: 91789576

GI number: 91789576

Start: 3937552

End: 3938448

Strand: Reverse

Name: ycfK [C]

Synonym: Bpro_3731

Alternate gene names: 91789576

Gene position: 3938448-3937552 (Counterclockwise)

Preceding gene: 91789577

Following gene: 91789575

Centisome position: 75.74

GC content: 57.3

Gene sequence:

>897_bases
ATGGATCGCATTAACACAGCATCAAAAGCTGTTGACCTCTTCGGGGCCGGCAAGCATGGCTGGAAGAACGCCAATCTCGG
ACTCGGCGTTACACCTACCGACTTCAACGCGGAATTTTGCAACGGCGTGCAGGAAGAGATTTTGGCCATCATCGAGGCCG
GAGGGCAGGTGCCTGCGATAGCGACGCGCAACCAGATGCTTCTGGCGCTGCGTGCGGCCGGTGTGTTCACCACGCCCGCG
CAGTTTGACAACACTACGAAGGCCGCGACCACGGCTTTCGTGCAGCGAGCGCTTGGAAATTATCAAGACGCCATATCGGT
CGCAGCGAACACCGTTCTGACCGCCGCCGACTTCGGTAAGGTAATTTTTGTCGACGCCAGCGGAGGGCCCCGCACCATCA
CATTGCCGCTCGTTACGCAGTCTGGTGCCGCGCTGAAAATATACAAGTCGGACTCATCAGCCAATGCTGTGACGGTTGTA
ACCTCCGGTTCGAATGTGATTGTCGGCACGAACAACTTCGCGGGCGGCACCAGCTCATCGTCCGTCATTCTGCGCACTGT
GGGAGATTTCCTCGATTTATGCGCTACGGGCGGTGGATCGTATTACGGTCTTTCCAGCGGCGGCGCCGCAAGCGTTGCAG
CGAGTGGCTACCAGAAGCTGCCCAGCGGTCTGATCATTCAGTGGGGTGTTTTTACCGGCAACGCGACGCCCGGTAATCCG
GTTGCGGTGACCTTCCCATTAACTTTCCCCACCGCTTTATACAGCCTCACATTCGGCTCTGCAGGGGGTACGACGGCCAC
TTGCGCTGCTTGGTCCGATACCCAGTTGCTGACCGGATTCAATGGGCGCGCTTCGATTGCATCAAATTCAAATTATTGGG
CTGCCATTGGCAAATAA

Upstream 100 bases:

>100_bases
GGACCTTTCCTCGCCCTCGCTGATCGTTTGTCCGATCACTGAGCGCAAGCCGGCACACACCAACGTATTTTTCGCCTACA
CGGCATAAGGAGCCTAACCA

Downstream 100 bases:

>100_bases
GGAAAATCATGTTCTATTCAAAATTGACAGGCGGGTTTTACTCCGCCGACCTCCACGGGTCTCGCACGCTGGTCATAGCC
GACGCAGCGTGGGTGCCGCC

Product: tail fiber protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MDRINTASKAVDLFGAGKHGWKNANLGLGVTPTDFNAEFCNGVQEEILAIIEAGGQVPAIATRNQMLLALRAAGVFTTPA
QFDNTTKAATTAFVQRALGNYQDAISVAANTVLTAADFGKVIFVDASGGPRTITLPLVTQSGAALKIYKSDSSANAVTVV
TSGSNVIVGTNNFAGGTSSSSVILRTVGDFLDLCATGGGSYYGLSSGGAASVAASGYQKLPSGLIIQWGVFTGNATPGNP
VAVTFPLTFPTALYSLTFGSAGGTTATCAAWSDTQLLTGFNGRASIASNSNYWAAIGK

Sequences:

>Translated_298_residues
MDRINTASKAVDLFGAGKHGWKNANLGLGVTPTDFNAEFCNGVQEEILAIIEAGGQVPAIATRNQMLLALRAAGVFTTPA
QFDNTTKAATTAFVQRALGNYQDAISVAANTVLTAADFGKVIFVDASGGPRTITLPLVTQSGAALKIYKSDSSANAVTVV
TSGSNVIVGTNNFAGGTSSSSVILRTVGDFLDLCATGGGSYYGLSSGGAASVAASGYQKLPSGLIIQWGVFTGNATPGNP
VAVTFPLTFPTALYSLTFGSAGGTTATCAAWSDTQLLTGFNGRASIASNSNYWAAIGK
>Mature_298_residues
MDRINTASKAVDLFGAGKHGWKNANLGLGVTPTDFNAEFCNGVQEEILAIIEAGGQVPAIATRNQMLLALRAAGVFTTPA
QFDNTTKAATTAFVQRALGNYQDAISVAANTVLTAADFGKVIFVDASGGPRTITLPLVTQSGAALKIYKSDSSANAVTVV
TSGSNVIVGTNNFAGGTSSSSVILRTVGDFLDLCATGGGSYYGLSSGGAASVAASGYQKLPSGLIIQWGVFTGNATPGNP
VAVTFPLTFPTALYSLTFGSAGGTTATCAAWSDTQLLTGFNGRASIASNSNYWAAIGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30232; Mature: 30232

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRINTASKAVDLFGAGKHGWKNANLGLGVTPTDFNAEFCNGVQEEILAIIEAGGQVPAI
CCCCCCHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCEE
ATRNQMLLALRAAGVFTTPAQFDNTTKAATTAFVQRALGNYQDAISVAANTVLTAADFGK
ECCCEEEEEEEECCCEECCHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCC
VIFVDASGGPRTITLPLVTQSGAALKIYKSDSSANAVTVVTSGSNVIVGTNNFAGGTSSS
EEEEECCCCCEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCC
SVILRTVGDFLDLCATGGGSYYGLSSGGAASVAASGYQKLPSGLIIQWGVFTGNATPGNP
CCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCC
VAVTFPLTFPTALYSLTFGSAGGTTATCAAWSDTQLLTGFNGRASIASNSNYWAAIGK
EEEEEECCCHHHHHEEEECCCCCCEEEEEECCCCEEEECCCCCEEEECCCCEEEEECC
>Mature Secondary Structure
MDRINTASKAVDLFGAGKHGWKNANLGLGVTPTDFNAEFCNGVQEEILAIIEAGGQVPAI
CCCCCCHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCEE
ATRNQMLLALRAAGVFTTPAQFDNTTKAATTAFVQRALGNYQDAISVAANTVLTAADFGK
ECCCEEEEEEEECCCEECCHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCC
VIFVDASGGPRTITLPLVTQSGAALKIYKSDSSANAVTVVTSGSNVIVGTNNFAGGTSSS
EEEEECCCCCEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCC
SVILRTVGDFLDLCATGGGSYYGLSSGGAASVAASGYQKLPSGLIIQWGVFTGNATPGNP
CCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCC
VAVTFPLTFPTALYSLTFGSAGGTTATCAAWSDTQLLTGFNGRASIASNSNYWAAIGK
EEEEEECCCHHHHHEEEECCCCCCEEEEEECCCCEEEECCCCCEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA