Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789558

Identifier: 91789558

GI number: 91789558

Start: 3918615

End: 3919448

Strand: Reverse

Name: 91789558

Synonym: Bpro_3712

Alternate gene names: NA

Gene position: 3919448-3918615 (Counterclockwise)

Preceding gene: 91789559

Following gene: 91789557

Centisome position: 75.37

GC content: 66.55

Gene sequence:

>834_bases
GTGAAGCAGCAACCCGCCAGCGTCCAGCCTGTCAGCCGTGAACTGCGGGCCTGGCTGCTTGCTCAATCAGCCCAGGGGCA
TTCGCGGGCAGCCCTGTTCCAGGCGATGCTGGACGCCGGCTGGCAGCACGCGACCGCCTGCCGGGCCCTGAGGCTGACGC
CGCAGGAACAAGCTGCGTTTACGGCGCTAGCCCAGCCGGCAGAAGGCGCCAGCATGAGCATGGACGCCGGCGACCGGTGG
GTTGACGTGCTGCAGCGCCTGCAACTGCCCGATCTGGTGGTGTTTGGCAACTTGCTCAGCGACAGCGAATGCGAGGCCTT
GATGGAGGTGGCGCAGCCACGCCTGGCGCGATCACTCACGGTGAACATCAAGACCGGGGGCGAGGAGCGCAACCGGGACC
GCACCAGCCAGGGCATGTTTTTCGCGCGGGGCGAGAATCCGCTGGTGCAGCGCGTGGAGGCGCGCATTGCCCGCCTGGTG
GGCTGGCCGGTCGACAGGGGCGAAGGCCTGCAGGTGCTGCGCTACCGGCAGGGCGCCCAGTACAAGCCCCACTATGATTA
CTTTGACCCGGCCGAGCCCGGTACGCCTGCCATACTTCAGCGGGGCGGGCAGCGCGTAGCCACCCTGATCATGTACCTGA
ACGAACCCGAGCAGGGCGGCGCCACGGTATTTCCGGACATTGGCCTGCAGGTGACGCCCCGGCGCGGCACTGCGGTTTTT
TTCAGTTACCCGGCTGCGAATCCCGCCAGCCTCACCAGGCACGGCGGCGAGCCCGTGAAGGCCGGAGAAAAGTGGATTGC
CACCAAGTGGCTGCGTGAACGAGAATTTGTTTAA

Upstream 100 bases:

>100_bases
CGAAGGGTACCGCTTCGACCCTGCCGCATCGCAGGCCGACCGCCTCGTGTTCCGGCGCCGGCAGGCGGCCTGAAGCGTTA
GTACTGCAGGCAGGCCCGAT

Downstream 100 bases:

>100_bases
CACCCCTGTTGAGGCTCACTGCGTGTAGCCTCCTCTCCCCTTGCAGGGGACGGCGCCTGTGGGCCGGCGTAGCCGGACCC
ACGGCCCCCGCTGGTGGAGT

Product: procollagen-proline, 2-oxoglutarate-4-dioxygenase

Products: NA

Alternate protein names: 2OG-Fe(II) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; Procollagen-Proline 2-Oxoglutarate-4-Dioxygenase; Response Regulator Receiver Domain-Containing Protein; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Subunit Alpha; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Protein; Procollagen-Proline 2-Oxoglutarate-4- Dioxygenase; Prolyl 4-Hydroxylase

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKQQPASVQPVSRELRAWLLAQSAQGHSRAALFQAMLDAGWQHATACRALRLTPQEQAAFTALAQPAEGASMSMDAGDRW
VDVLQRLQLPDLVVFGNLLSDSECEALMEVAQPRLARSLTVNIKTGGEERNRDRTSQGMFFARGENPLVQRVEARIARLV
GWPVDRGEGLQVLRYRQGAQYKPHYDYFDPAEPGTPAILQRGGQRVATLIMYLNEPEQGGATVFPDIGLQVTPRRGTAVF
FSYPAANPASLTRHGGEPVKAGEKWIATKWLREREFV

Sequences:

>Translated_277_residues
MKQQPASVQPVSRELRAWLLAQSAQGHSRAALFQAMLDAGWQHATACRALRLTPQEQAAFTALAQPAEGASMSMDAGDRW
VDVLQRLQLPDLVVFGNLLSDSECEALMEVAQPRLARSLTVNIKTGGEERNRDRTSQGMFFARGENPLVQRVEARIARLV
GWPVDRGEGLQVLRYRQGAQYKPHYDYFDPAEPGTPAILQRGGQRVATLIMYLNEPEQGGATVFPDIGLQVTPRRGTAVF
FSYPAANPASLTRHGGEPVKAGEKWIATKWLREREFV
>Mature_277_residues
MKQQPASVQPVSRELRAWLLAQSAQGHSRAALFQAMLDAGWQHATACRALRLTPQEQAAFTALAQPAEGASMSMDAGDRW
VDVLQRLQLPDLVVFGNLLSDSECEALMEVAQPRLARSLTVNIKTGGEERNRDRTSQGMFFARGENPLVQRVEARIARLV
GWPVDRGEGLQVLRYRQGAQYKPHYDYFDPAEPGTPAILQRGGQRVATLIMYLNEPEQGGATVFPDIGLQVTPRRGTAVF
FSYPAANPASLTRHGGEPVKAGEKWIATKWLREREFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI217272849, Length=188, Percent_Identity=39.8936170212766, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI63252888, Length=188, Percent_Identity=39.8936170212766, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI63252886, Length=188, Percent_Identity=38.8297872340425, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI4758868, Length=187, Percent_Identity=38.5026737967914, Blast_Score=131, Evalue=7e-31,
Organism=Homo sapiens, GI217272863, Length=187, Percent_Identity=38.5026737967914, Blast_Score=131, Evalue=7e-31,
Organism=Homo sapiens, GI63252893, Length=188, Percent_Identity=37.7659574468085, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI63252891, Length=188, Percent_Identity=37.7659574468085, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI217272861, Length=188, Percent_Identity=37.7659574468085, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI217272851, Length=187, Percent_Identity=35.8288770053476, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI33589818, Length=189, Percent_Identity=33.8624338624339, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17541712, Length=187, Percent_Identity=35.8288770053476, Blast_Score=120, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17552840, Length=187, Percent_Identity=31.5508021390374, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI72000637, Length=188, Percent_Identity=30.8510638297872, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193209070, Length=151, Percent_Identity=29.1390728476821, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193209068, Length=154, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24651477, Length=188, Percent_Identity=37.7659574468085, Blast_Score=133, Evalue=1e-31,
Organism=Drosophila melanogaster, GI221460681, Length=191, Percent_Identity=35.0785340314136, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24651407, Length=187, Percent_Identity=33.6898395721925, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI116008128, Length=188, Percent_Identity=31.9148936170213, Blast_Score=114, Evalue=6e-26,
Organism=Drosophila melanogaster, GI116008432, Length=188, Percent_Identity=31.9148936170213, Blast_Score=114, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24651418, Length=198, Percent_Identity=35.8585858585859, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI281362877, Length=192, Percent_Identity=30.7291666666667, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24651420, Length=188, Percent_Identity=35.6382978723404, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI281361323, Length=187, Percent_Identity=27.807486631016, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21358233, Length=189, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24651424, Length=188, Percent_Identity=29.2553191489362, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI116008434, Length=197, Percent_Identity=27.9187817258883, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI78706702, Length=187, Percent_Identity=26.7379679144385, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24666354, Length=193, Percent_Identity=26.4248704663212, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24651430, Length=188, Percent_Identity=26.5957446808511, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI221512818, Length=124, Percent_Identity=34.6774193548387, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI116008130, Length=188, Percent_Identity=27.6595744680851, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116008537, Length=188, Percent_Identity=27.6595744680851, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21358309, Length=187, Percent_Identity=31.0160427807487, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45550650, Length=131, Percent_Identity=29.7709923664122, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24651416, Length=187, Percent_Identity=31.5508021390374, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30708; Mature: 30708

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQPASVQPVSRELRAWLLAQSAQGHSRAALFQAMLDAGWQHATACRALRLTPQEQAAF
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
TALAQPAEGASMSMDAGDRWVDVLQRLQLPDLVVFGNLLSDSECEALMEVAQPRLARSLT
HHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEE
VNIKTGGEERNRDRTSQGMFFARGENPLVQRVEARIARLVGWPVDRGEGLQVLRYRQGAQ
EEEECCCCHHCCCHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
YKPHYDYFDPAEPGTPAILQRGGQRVATLIMYLNEPEQGGATVFPDIGLQVTPRRGTAVF
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCCEEE
FSYPAANPASLTRHGGEPVKAGEKWIATKWLREREFV
EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQQPASVQPVSRELRAWLLAQSAQGHSRAALFQAMLDAGWQHATACRALRLTPQEQAAF
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
TALAQPAEGASMSMDAGDRWVDVLQRLQLPDLVVFGNLLSDSECEALMEVAQPRLARSLT
HHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEE
VNIKTGGEERNRDRTSQGMFFARGENPLVQRVEARIARLVGWPVDRGEGLQVLRYRQGAQ
EEEECCCCHHCCCHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
YKPHYDYFDPAEPGTPAILQRGGQRVATLIMYLNEPEQGGATVFPDIGLQVTPRRGTAVF
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCCEEE
FSYPAANPASLTRHGGEPVKAGEKWIATKWLREREFV
EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA