| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789558
Identifier: 91789558
GI number: 91789558
Start: 3918615
End: 3919448
Strand: Reverse
Name: 91789558
Synonym: Bpro_3712
Alternate gene names: NA
Gene position: 3919448-3918615 (Counterclockwise)
Preceding gene: 91789559
Following gene: 91789557
Centisome position: 75.37
GC content: 66.55
Gene sequence:
>834_bases GTGAAGCAGCAACCCGCCAGCGTCCAGCCTGTCAGCCGTGAACTGCGGGCCTGGCTGCTTGCTCAATCAGCCCAGGGGCA TTCGCGGGCAGCCCTGTTCCAGGCGATGCTGGACGCCGGCTGGCAGCACGCGACCGCCTGCCGGGCCCTGAGGCTGACGC CGCAGGAACAAGCTGCGTTTACGGCGCTAGCCCAGCCGGCAGAAGGCGCCAGCATGAGCATGGACGCCGGCGACCGGTGG GTTGACGTGCTGCAGCGCCTGCAACTGCCCGATCTGGTGGTGTTTGGCAACTTGCTCAGCGACAGCGAATGCGAGGCCTT GATGGAGGTGGCGCAGCCACGCCTGGCGCGATCACTCACGGTGAACATCAAGACCGGGGGCGAGGAGCGCAACCGGGACC GCACCAGCCAGGGCATGTTTTTCGCGCGGGGCGAGAATCCGCTGGTGCAGCGCGTGGAGGCGCGCATTGCCCGCCTGGTG GGCTGGCCGGTCGACAGGGGCGAAGGCCTGCAGGTGCTGCGCTACCGGCAGGGCGCCCAGTACAAGCCCCACTATGATTA CTTTGACCCGGCCGAGCCCGGTACGCCTGCCATACTTCAGCGGGGCGGGCAGCGCGTAGCCACCCTGATCATGTACCTGA ACGAACCCGAGCAGGGCGGCGCCACGGTATTTCCGGACATTGGCCTGCAGGTGACGCCCCGGCGCGGCACTGCGGTTTTT TTCAGTTACCCGGCTGCGAATCCCGCCAGCCTCACCAGGCACGGCGGCGAGCCCGTGAAGGCCGGAGAAAAGTGGATTGC CACCAAGTGGCTGCGTGAACGAGAATTTGTTTAA
Upstream 100 bases:
>100_bases CGAAGGGTACCGCTTCGACCCTGCCGCATCGCAGGCCGACCGCCTCGTGTTCCGGCGCCGGCAGGCGGCCTGAAGCGTTA GTACTGCAGGCAGGCCCGAT
Downstream 100 bases:
>100_bases CACCCCTGTTGAGGCTCACTGCGTGTAGCCTCCTCTCCCCTTGCAGGGGACGGCGCCTGTGGGCCGGCGTAGCCGGACCC ACGGCCCCCGCTGGTGGAGT
Product: procollagen-proline, 2-oxoglutarate-4-dioxygenase
Products: NA
Alternate protein names: 2OG-Fe(II) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; Procollagen-Proline 2-Oxoglutarate-4-Dioxygenase; Response Regulator Receiver Domain-Containing Protein; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Subunit Alpha; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Protein; Procollagen-Proline 2-Oxoglutarate-4- Dioxygenase; Prolyl 4-Hydroxylase
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKQQPASVQPVSRELRAWLLAQSAQGHSRAALFQAMLDAGWQHATACRALRLTPQEQAAFTALAQPAEGASMSMDAGDRW VDVLQRLQLPDLVVFGNLLSDSECEALMEVAQPRLARSLTVNIKTGGEERNRDRTSQGMFFARGENPLVQRVEARIARLV GWPVDRGEGLQVLRYRQGAQYKPHYDYFDPAEPGTPAILQRGGQRVATLIMYLNEPEQGGATVFPDIGLQVTPRRGTAVF FSYPAANPASLTRHGGEPVKAGEKWIATKWLREREFV
Sequences:
>Translated_277_residues MKQQPASVQPVSRELRAWLLAQSAQGHSRAALFQAMLDAGWQHATACRALRLTPQEQAAFTALAQPAEGASMSMDAGDRW VDVLQRLQLPDLVVFGNLLSDSECEALMEVAQPRLARSLTVNIKTGGEERNRDRTSQGMFFARGENPLVQRVEARIARLV GWPVDRGEGLQVLRYRQGAQYKPHYDYFDPAEPGTPAILQRGGQRVATLIMYLNEPEQGGATVFPDIGLQVTPRRGTAVF FSYPAANPASLTRHGGEPVKAGEKWIATKWLREREFV >Mature_277_residues MKQQPASVQPVSRELRAWLLAQSAQGHSRAALFQAMLDAGWQHATACRALRLTPQEQAAFTALAQPAEGASMSMDAGDRW VDVLQRLQLPDLVVFGNLLSDSECEALMEVAQPRLARSLTVNIKTGGEERNRDRTSQGMFFARGENPLVQRVEARIARLV GWPVDRGEGLQVLRYRQGAQYKPHYDYFDPAEPGTPAILQRGGQRVATLIMYLNEPEQGGATVFPDIGLQVTPRRGTAVF FSYPAANPASLTRHGGEPVKAGEKWIATKWLREREFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI217272849, Length=188, Percent_Identity=39.8936170212766, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI63252888, Length=188, Percent_Identity=39.8936170212766, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI63252886, Length=188, Percent_Identity=38.8297872340425, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI4758868, Length=187, Percent_Identity=38.5026737967914, Blast_Score=131, Evalue=7e-31, Organism=Homo sapiens, GI217272863, Length=187, Percent_Identity=38.5026737967914, Blast_Score=131, Evalue=7e-31, Organism=Homo sapiens, GI63252893, Length=188, Percent_Identity=37.7659574468085, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI63252891, Length=188, Percent_Identity=37.7659574468085, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI217272861, Length=188, Percent_Identity=37.7659574468085, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI217272851, Length=187, Percent_Identity=35.8288770053476, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI33589818, Length=189, Percent_Identity=33.8624338624339, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17541712, Length=187, Percent_Identity=35.8288770053476, Blast_Score=120, Evalue=7e-28, Organism=Caenorhabditis elegans, GI17552840, Length=187, Percent_Identity=31.5508021390374, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI72000637, Length=188, Percent_Identity=30.8510638297872, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193209070, Length=151, Percent_Identity=29.1390728476821, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193209068, Length=154, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24651477, Length=188, Percent_Identity=37.7659574468085, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI221460681, Length=191, Percent_Identity=35.0785340314136, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24651407, Length=187, Percent_Identity=33.6898395721925, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI116008128, Length=188, Percent_Identity=31.9148936170213, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI116008432, Length=188, Percent_Identity=31.9148936170213, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI24651418, Length=198, Percent_Identity=35.8585858585859, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI281362877, Length=192, Percent_Identity=30.7291666666667, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24651420, Length=188, Percent_Identity=35.6382978723404, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI281361323, Length=187, Percent_Identity=27.807486631016, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI21358233, Length=189, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24651424, Length=188, Percent_Identity=29.2553191489362, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI116008434, Length=197, Percent_Identity=27.9187817258883, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI78706702, Length=187, Percent_Identity=26.7379679144385, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24666354, Length=193, Percent_Identity=26.4248704663212, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI24651430, Length=188, Percent_Identity=26.5957446808511, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI221512818, Length=124, Percent_Identity=34.6774193548387, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI116008130, Length=188, Percent_Identity=27.6595744680851, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI116008537, Length=188, Percent_Identity=27.6595744680851, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21358309, Length=187, Percent_Identity=31.0160427807487, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI45550650, Length=131, Percent_Identity=29.7709923664122, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24651416, Length=187, Percent_Identity=31.5508021390374, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30708; Mature: 30708
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQPASVQPVSRELRAWLLAQSAQGHSRAALFQAMLDAGWQHATACRALRLTPQEQAAF CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH TALAQPAEGASMSMDAGDRWVDVLQRLQLPDLVVFGNLLSDSECEALMEVAQPRLARSLT HHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEE VNIKTGGEERNRDRTSQGMFFARGENPLVQRVEARIARLVGWPVDRGEGLQVLRYRQGAQ EEEECCCCHHCCCHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC YKPHYDYFDPAEPGTPAILQRGGQRVATLIMYLNEPEQGGATVFPDIGLQVTPRRGTAVF CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCCEEE FSYPAANPASLTRHGGEPVKAGEKWIATKWLREREFV EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKQQPASVQPVSRELRAWLLAQSAQGHSRAALFQAMLDAGWQHATACRALRLTPQEQAAF CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH TALAQPAEGASMSMDAGDRWVDVLQRLQLPDLVVFGNLLSDSECEALMEVAQPRLARSLT HHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHEEE VNIKTGGEERNRDRTSQGMFFARGENPLVQRVEARIARLVGWPVDRGEGLQVLRYRQGAQ EEEECCCCHHCCCHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC YKPHYDYFDPAEPGTPAILQRGGQRVATLIMYLNEPEQGGATVFPDIGLQVTPRRGTAVF CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCCEEE FSYPAANPASLTRHGGEPVKAGEKWIATKWLREREFV EECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA