| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91789554
Identifier: 91789554
GI number: 91789554
Start: 3914975
End: 3915394
Strand: Reverse
Name: 91789554
Synonym: Bpro_3708
Alternate gene names: NA
Gene position: 3915394-3914975 (Counterclockwise)
Preceding gene: 91789555
Following gene: 91789553
Centisome position: 75.29
GC content: 53.81
Gene sequence:
>420_bases TTGGAACTGCGTATGGACATTACCGCCTTTCCTCTGTTTTGGAGATGGACGCAGCCGTCGTATTCCGTGCTTCCTGCCGA TGCTCTTGAGACGCTGTGCCCGCTGGAGACCGAGTTAGTTGATTTGCTATGCGCGTCTGCGCCGAAGACTCTTGGTCCGC GTACTATCAAGCATCACGCGACTGAAAACACTGACGAAACTCGAAGGTGGCTAGCCAGCCTGCCTGTGCCAGTTAGTCGT GTGGTCATCGCCTGGGGCAGAGATACCGCTTTGTCGTTGCCGTGGGATATTTTTGTCACTTACTGGAGCGACTTCTGCTA CCCTTCCAGCGATGATGTGGACGTCTTTGTAGAAGGTGGGCCAGTAGTCCTTCGGTGGCATCATGACGAGACATTCGAAT ATGACGCCGATGCGCTTTAA
Upstream 100 bases:
>100_bases CATAATGCCTTCTAACTGGTGGCCCGATACGGACACGCAACAAAAAATGGCCGCTTCGCGGCGTATGTTGCGCGCCGGTC ATCTTCAATGTTAAAGGGCA
Downstream 100 bases:
>100_bases CTGGTCTGCCAAGAGCGGGCCGCCTGCCGAGCCCGCTTACTTTTTAACGTTAACCGCCATCCAATCGTGACGGGAGACAT CAGTGGAACCACCTGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MELRMDITAFPLFWRWTQPSYSVLPADALETLCPLETELVDLLCASAPKTLGPRTIKHHATENTDETRRWLASLPVPVSR VVIAWGRDTALSLPWDIFVTYWSDFCYPSSDDVDVFVEGGPVVLRWHHDETFEYDADAL
Sequences:
>Translated_139_residues MELRMDITAFPLFWRWTQPSYSVLPADALETLCPLETELVDLLCASAPKTLGPRTIKHHATENTDETRRWLASLPVPVSR VVIAWGRDTALSLPWDIFVTYWSDFCYPSSDDVDVFVEGGPVVLRWHHDETFEYDADAL >Mature_139_residues MELRMDITAFPLFWRWTQPSYSVLPADALETLCPLETELVDLLCASAPKTLGPRTIKHHATENTDETRRWLASLPVPVSR VVIAWGRDTALSLPWDIFVTYWSDFCYPSSDDVDVFVEGGPVVLRWHHDETFEYDADAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15912; Mature: 15912
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELRMDITAFPLFWRWTQPSYSVLPADALETLCPLETELVDLLCASAPKTLGPRTIKHHA CCEECCEEECEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEECCC TENTDETRRWLASLPVPVSRVVIAWGRDTALSLPWDIFVTYWSDFCYPSSDDVDVFVEGG CCCHHHHHHHHHHCCCCCEEEEEEECCCCEECCCHHHHHEEHHHCCCCCCCCEEEEECCC PVVLRWHHDETFEYDADAL CEEEEEECCCCCCCCCCCC >Mature Secondary Structure MELRMDITAFPLFWRWTQPSYSVLPADALETLCPLETELVDLLCASAPKTLGPRTIKHHA CCEECCEEECEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEECCC TENTDETRRWLASLPVPVSRVVIAWGRDTALSLPWDIFVTYWSDFCYPSSDDVDVFVEGG CCCHHHHHHHHHHCCCCCEEEEEEECCCCEECCCHHHHHEEHHHCCCCCCCCEEEEECCC PVVLRWHHDETFEYDADAL CEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA