Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789548

Identifier: 91789548

GI number: 91789548

Start: 3911727

End: 3912227

Strand: Direct

Name: 91789548

Synonym: Bpro_3702

Alternate gene names: NA

Gene position: 3911727-3912227 (Clockwise)

Preceding gene: 91789547

Following gene: 91789549

Centisome position: 75.22

GC content: 60.08

Gene sequence:

>501_bases
TTGCAGCGCACTTCAATCAACCGACTATTCAAGGAGCCCGACATGAACGCATTTTCAATTCGCAGCTTTATCGCCCTGCC
TGTGCTGGGCCTGGCTTTCGCCGGCGCCGCCCTGGCTGCCGACTTTCAAACCATGCCCGTCCAGAACGTGCAGATCGACG
ATTTCGCAGCCGGCAAAAAAGCCATTGATGCCAAAAACTGGGCACAGGCCGTCAGCAGCTTCAGCAAGGTCGTCGCCAGG
AACCCCACGAATGCCGACGCCTACAGCTACCTCGGTTATGCCAACCGCTGGCTGGGCAAGTACGACGAGGCCTTTGCCGC
CTACGGCAAGGCGCTGGCGCTGGACCCCAGGCACAAGGGCGCGCTGGAATATTCGGGCATCGCCTACCTGAAAACCAACC
AGAAAGCCCAGGCTGAAGCCCAGTTCGCCAAGCTGCAGGCCATCTGCGCGACCTGCGAGGAAACCAGCGACCTGGCCAAG
GCCGTTGCAGCGGCTAAATAA

Upstream 100 bases:

>100_bases
TAACCCTTGCGATCAACCGCCGTCCCCGTCCCAATTACAAATAAATACGAATCCAGCTGCATCCGTTTTTCAGGTTCCGT
CGTTTGTCTCAGGTGCTGGT

Downstream 100 bases:

>100_bases
CCAAAAAGCCCTGCCTGCCGCCCTGCCATCCTAGCAACCCGCCGGGATGGTTTCTCCCCTGATCCCGATCCTGTTCCCTT
CCCATTGCCCCCGGAAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MQRTSINRLFKEPDMNAFSIRSFIALPVLGLAFAGAALAADFQTMPVQNVQIDDFAAGKKAIDAKNWAQAVSSFSKVVAR
NPTNADAYSYLGYANRWLGKYDEAFAAYGKALALDPRHKGALEYSGIAYLKTNQKAQAEAQFAKLQAICATCEETSDLAK
AVAAAK

Sequences:

>Translated_166_residues
MQRTSINRLFKEPDMNAFSIRSFIALPVLGLAFAGAALAADFQTMPVQNVQIDDFAAGKKAIDAKNWAQAVSSFSKVVAR
NPTNADAYSYLGYANRWLGKYDEAFAAYGKALALDPRHKGALEYSGIAYLKTNQKAQAEAQFAKLQAICATCEETSDLAK
AVAAAK
>Mature_166_residues
MQRTSINRLFKEPDMNAFSIRSFIALPVLGLAFAGAALAADFQTMPVQNVQIDDFAAGKKAIDAKNWAQAVSSFSKVVAR
NPTNADAYSYLGYANRWLGKYDEAFAAYGKALALDPRHKGALEYSGIAYLKTNQKAQAEAQFAKLQAICATCEETSDLAK
AVAAAK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17922; Mature: 17922

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTSINRLFKEPDMNAFSIRSFIALPVLGLAFAGAALAADFQTMPVQNVQIDDFAAGKK
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHCCCH
AIDAKNWAQAVSSFSKVVARNPTNADAYSYLGYANRWLGKYDEAFAAYGKALALDPRHKG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC
ALEYSGIAYLKTNQKAQAEAQFAKLQAICATCEETSDLAKAVAAAK
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRTSINRLFKEPDMNAFSIRSFIALPVLGLAFAGAALAADFQTMPVQNVQIDDFAAGKK
CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHCCCH
AIDAKNWAQAVSSFSKVVARNPTNADAYSYLGYANRWLGKYDEAFAAYGKALALDPRHKG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC
ALEYSGIAYLKTNQKAQAEAQFAKLQAICATCEETSDLAKAVAAAK
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA