Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789464

Identifier: 91789464

GI number: 91789464

Start: 3814589

End: 3817258

Strand: Direct

Name: 91789464

Synonym: Bpro_3613

Alternate gene names: NA

Gene position: 3814589-3817258 (Clockwise)

Preceding gene: 91789463

Following gene: 91789465

Centisome position: 73.35

GC content: 66.44

Gene sequence:

>2670_bases
ATGAATCATCGTGGTCGTTGGCGTATTGGTGCTCTGGCGAGCGCTATTGCATTGCTGGGTAGCCTGGCAAGTCTGGAAGC
ACATGCCCTGGCGTTGGGCCGAATAACGGTTCAATCGGCGCTGGGGGAACCCCTTCGCGCAGAAATCGACATTGCAGACA
TCACTGCAGACGAGGCCTCCAGCCTAAAGGCCGGCGTCGCATCTGCCGACACCTTCAAGGCAGCGGGGCTTGAGTACACC
GCCGCGCTGTCGGGCCTGCAGATTAACCTGCAACGCCGCACCGATGGCCGGGCTTATTTGCGCCTGACCAGCAGCCGACC
CGTGAACGAGCCCTTTGTCGACCTGATTCTGGAAGCCAGCTGGGCATCCGGGCGGATCACCCGCGACTACACCATGCTGT
TTGACCCGCCCAACCTGCGGTCCGCAGGCCCGGCTGTAGCGCCAACCGCGCCCCAATTGTCACGGCCAGTCCCGCCCACC
GCCGCAGCGCCAGCCAGGACGGCGACGCCTGCACCTTCCACACCGCCAGCCCCACCCGTGGCCAAAGCCGCGCCGGCTGA
CAAGGCCCCCGCGAGCGACAAACAGCTCACGGTCAAGACCGGAGACACCGCAGGGCGAATCGCAGCGGAGAACAAGCCGG
CCAGCGTGTCGCTGGACCAGATGCTGGTGGCCTTGCTCAGGAGCAATCCAAACGCATTTATTGGCGGCAACGTCAACCGG
CTCAAATCCGGCGCCGTGCTGGAAATGCCCAGCGACGAAGCTGCCAGCGCCATCCCTCCCCGCGAAGCCACGCAAACCAT
CGTGGCCCAAAGCAGGGATTTCAATAACTTCCGGCGCAAGCTCGCCGAAAGCGTGCCAGCCGCTCAGGTGGCCAGCGCGG
ACCGGCAGGCTGGCGGAAAAGTGCAGGCCAAGGTCGAGGATCGCACCCCGGCAAACACCACCCCCGACAAGTTGACGCTG
TCCAAAGGTGCGGTTCAGGGCAAAGCAGCAACCGAAGACAAGATTGCCAAAGACAGGCAAGCCCAGGATGCCTCTGCCCG
CGTGGCGGAGCTGTCAAAAAACATCAGCGATCTCAACAAGCTGGGTGTTGCCCCCGCTCCGGTGGCAACCGCCAGCGCCG
CCAAGGCGCCCGGCGTCGCCTTACCCGCACCGTCGGGCCTTGCGGCACCGGCACCTGCACCTGTGCCCCCTGCGGCTGCA
GCGGCCAATTCAGCCCAGCCTGGCACCGCCGGCAGCCCCGTATCAACACCAGCGGCTCCAGCCTCTGCAGCCATCGCGGT
CCCGGCCATCCCCGCTGCCAGTGCAGCCGCGGCGGCGCCTATCGCCCCGGCCTCTGCAGCCGATGCATCGCCCCCGGTCG
CCGCAGCTGTCCCCCCCAAGAAACCCGTGGTGGTCGCTCCTCCACCCCCGGAACCCAGTCTGATGGACGGTTTGCTGGAG
AACCCGCTGACCCTGCCGCTGGCCGGTGGCTTGCTGGCCCTGCTGGCCGGTTTCGGTTTTTACCGCTACCGCCAGCGCAG
CAACCCGGCGCAGGTGGACAGTTCCTTCCTCGAGAGCCGCCTGCAGCCCGACTCCTTTTTCGGCGCCAGCGGTGGCCAGC
GCATCGATACCAACGAGGGAAACGCCACAGGCTCGTCCCTCGTTTACTCGCCCAGCCAGCTCGATGCCGCCGGCGATGTG
GACCCGGTGGCCGAGGCCGATGTCTACCTGGCCTATGGGCGCGACTTGCAGGCTGAGGAAATCCTCAAGGAAGCCATGCG
CACCAGCCCGACCCGCGTGGCCATCCATGCCAAACTGATGGAAATTTATGCCAAGCGTCGCGACACCAAGGCCTTCGAGG
CGGTGGCGGTCGAGGCCTTTAACCTGACGCAGGGCAGTGGCCCGGACTGGGCGTATATCAGCGAAATGGGCCGTGAACTC
GACCCGGCCAACCCGATGTACCAGCCCGGTGGACAACCCGTGGCCGCGGGCAAGGGCGGCGGCGCAGCCGCTTTCAGTGC
GGCCTCCGCCACAGTCGCCAGAAATGCCCCGCCAGCGCATGCCGCCCCCGTGGCGCCAGTGGTGGATGTCGACCTCGATC
TGGATTTCTCGCTGGGCGATGCGGAAGACGCGGCGACCATCCCCGTCGCCCCGCCCACCCCGCCCGTGCGATCAGCGCCC
CCTCGGCCGCCTGAGCCGCCTGTCGCCGCGAAACCCGCACCGGCACCGGCCCTGGCTGACCTGGACATGGATTTCGGCAG
CGCGACCGTCTCGCTGCCCGAGATAGCGACCCCTGCACCGGCATCAAAGCCTGCTGCAGCACCGGCCATCGAAATGGATT
TCCCCTCCGCAGGGCTGAACTTCACACCCGAGCCCACTGCCTCATCGAAGCCGGTCCTGGCCACCAGGGCCGCCACCGCA
CCTGCGCCGGCGTCCTCCGACAGTGGCATGCTGGAGTTTGACCTCGGCTCACTGTCGCTGGACCTGGACGACGGCCCTGC
AACTGAAAGCCCGGTGCATGCCCAAGCAGCCACGTCCAGCGACCCGCTGGAAACCAAATTCCAGCTGGCTGAAGAATTCC
GTTCCCTGGGCGACCCGGACGGCGCAAGGTCTCTGGCCGAAGAAGTGCTGGCAGAAGCCAAAGGGCCGCTGAAGGTCAAA
GCGCAGGCGTTCCTCAACGCCCTCGCGTGA

Upstream 100 bases:

>100_bases
TTGATGTTATGGTTGTTTTTCGAAAATTCGCATTGAGGTTTTTGTGCGCCTAAGCAGAATAAAGTTACATGCAAACCCAG
CAATCGAGGATCAAAAACCC

Downstream 100 bases:

>100_bases
TTCCGGGGTGGTATTGCAAGCCGGCCTGAACGCCGCGCGTTCACTGGCCGTGAAGGTTTCCCCGTGAGGATTGCGCTCGG
TATCAGCTACAGCGGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: FimV Protein; Tfp Pilus Assembly Protein FimV-Like Protein; FimV N-Terminal Domain Protein; Type 4 Pilus Biogenesis; LysM Domain Protein; Lysm Domain; Transmembrane Tfp Pilus Assembly FimV Protein; TPR Repeat-Containing Protein; FimV C-Terminal Domain-Containing Protein; Protein Containing Tetratricopeptide Repeats; Tfp Pilus Assembly Protein FimV; LysM Domain-Containing Protein; LysM Domain-Containing; Tfp Pilus Assembly Protein FimV-Like; Transmembrane Tfp Pilus Assembly Protein FimV; FimV N-Terminal Domain; FimV N-Terminal Domain-Containing Protein; FimV Type IV Pilus Assembly Protein

Number of amino acids: Translated: 889; Mature: 889

Protein sequence:

>889_residues
MNHRGRWRIGALASAIALLGSLASLEAHALALGRITVQSALGEPLRAEIDIADITADEASSLKAGVASADTFKAAGLEYT
AALSGLQINLQRRTDGRAYLRLTSSRPVNEPFVDLILEASWASGRITRDYTMLFDPPNLRSAGPAVAPTAPQLSRPVPPT
AAAPARTATPAPSTPPAPPVAKAAPADKAPASDKQLTVKTGDTAGRIAAENKPASVSLDQMLVALLRSNPNAFIGGNVNR
LKSGAVLEMPSDEAASAIPPREATQTIVAQSRDFNNFRRKLAESVPAAQVASADRQAGGKVQAKVEDRTPANTTPDKLTL
SKGAVQGKAATEDKIAKDRQAQDASARVAELSKNISDLNKLGVAPAPVATASAAKAPGVALPAPSGLAAPAPAPVPPAAA
AANSAQPGTAGSPVSTPAAPASAAIAVPAIPAASAAAAAPIAPASAADASPPVAAAVPPKKPVVVAPPPPEPSLMDGLLE
NPLTLPLAGGLLALLAGFGFYRYRQRSNPAQVDSSFLESRLQPDSFFGASGGQRIDTNEGNATGSSLVYSPSQLDAAGDV
DPVAEADVYLAYGRDLQAEEILKEAMRTSPTRVAIHAKLMEIYAKRRDTKAFEAVAVEAFNLTQGSGPDWAYISEMGREL
DPANPMYQPGGQPVAAGKGGGAAAFSAASATVARNAPPAHAAPVAPVVDVDLDLDFSLGDAEDAATIPVAPPTPPVRSAP
PRPPEPPVAAKPAPAPALADLDMDFGSATVSLPEIATPAPASKPAAAPAIEMDFPSAGLNFTPEPTASSKPVLATRAATA
PAPASSDSGMLEFDLGSLSLDLDDGPATESPVHAQAATSSDPLETKFQLAEEFRSLGDPDGARSLAEEVLAEAKGPLKVK
AQAFLNALA

Sequences:

>Translated_889_residues
MNHRGRWRIGALASAIALLGSLASLEAHALALGRITVQSALGEPLRAEIDIADITADEASSLKAGVASADTFKAAGLEYT
AALSGLQINLQRRTDGRAYLRLTSSRPVNEPFVDLILEASWASGRITRDYTMLFDPPNLRSAGPAVAPTAPQLSRPVPPT
AAAPARTATPAPSTPPAPPVAKAAPADKAPASDKQLTVKTGDTAGRIAAENKPASVSLDQMLVALLRSNPNAFIGGNVNR
LKSGAVLEMPSDEAASAIPPREATQTIVAQSRDFNNFRRKLAESVPAAQVASADRQAGGKVQAKVEDRTPANTTPDKLTL
SKGAVQGKAATEDKIAKDRQAQDASARVAELSKNISDLNKLGVAPAPVATASAAKAPGVALPAPSGLAAPAPAPVPPAAA
AANSAQPGTAGSPVSTPAAPASAAIAVPAIPAASAAAAAPIAPASAADASPPVAAAVPPKKPVVVAPPPPEPSLMDGLLE
NPLTLPLAGGLLALLAGFGFYRYRQRSNPAQVDSSFLESRLQPDSFFGASGGQRIDTNEGNATGSSLVYSPSQLDAAGDV
DPVAEADVYLAYGRDLQAEEILKEAMRTSPTRVAIHAKLMEIYAKRRDTKAFEAVAVEAFNLTQGSGPDWAYISEMGREL
DPANPMYQPGGQPVAAGKGGGAAAFSAASATVARNAPPAHAAPVAPVVDVDLDLDFSLGDAEDAATIPVAPPTPPVRSAP
PRPPEPPVAAKPAPAPALADLDMDFGSATVSLPEIATPAPASKPAAAPAIEMDFPSAGLNFTPEPTASSKPVLATRAATA
PAPASSDSGMLEFDLGSLSLDLDDGPATESPVHAQAATSSDPLETKFQLAEEFRSLGDPDGARSLAEEVLAEAKGPLKVK
AQAFLNALA
>Mature_889_residues
MNHRGRWRIGALASAIALLGSLASLEAHALALGRITVQSALGEPLRAEIDIADITADEASSLKAGVASADTFKAAGLEYT
AALSGLQINLQRRTDGRAYLRLTSSRPVNEPFVDLILEASWASGRITRDYTMLFDPPNLRSAGPAVAPTAPQLSRPVPPT
AAAPARTATPAPSTPPAPPVAKAAPADKAPASDKQLTVKTGDTAGRIAAENKPASVSLDQMLVALLRSNPNAFIGGNVNR
LKSGAVLEMPSDEAASAIPPREATQTIVAQSRDFNNFRRKLAESVPAAQVASADRQAGGKVQAKVEDRTPANTTPDKLTL
SKGAVQGKAATEDKIAKDRQAQDASARVAELSKNISDLNKLGVAPAPVATASAAKAPGVALPAPSGLAAPAPAPVPPAAA
AANSAQPGTAGSPVSTPAAPASAAIAVPAIPAASAAAAAPIAPASAADASPPVAAAVPPKKPVVVAPPPPEPSLMDGLLE
NPLTLPLAGGLLALLAGFGFYRYRQRSNPAQVDSSFLESRLQPDSFFGASGGQRIDTNEGNATGSSLVYSPSQLDAAGDV
DPVAEADVYLAYGRDLQAEEILKEAMRTSPTRVAIHAKLMEIYAKRRDTKAFEAVAVEAFNLTQGSGPDWAYISEMGREL
DPANPMYQPGGQPVAAGKGGGAAAFSAASATVARNAPPAHAAPVAPVVDVDLDLDFSLGDAEDAATIPVAPPTPPVRSAP
PRPPEPPVAAKPAPAPALADLDMDFGSATVSLPEIATPAPASKPAAAPAIEMDFPSAGLNFTPEPTASSKPVLATRAATA
PAPASSDSGMLEFDLGSLSLDLDDGPATESPVHAQAATSSDPLETKFQLAEEFRSLGDPDGARSLAEEVLAEAKGPLKVK
AQAFLNALA

Specific function: Unknown

COG id: COG3170

COG function: function code NU; Tfp pilus assembly protein FimV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90257; Mature: 90257

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHRGRWRIGALASAIALLGSLASLEAHALALGRITVQSALGEPLRAEIDIADITADEAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHH
SLKAGVASADTFKAAGLEYTAALSGLQINLQRRTDGRAYLRLTSSRPVNEPFVDLILEAS
HHHHCCCCCCHHHHCCCCHHHHHCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHCC
WASGRITRDYTMLFDPPNLRSAGPAVAPTAPQLSRPVPPTAAAPARTATPAPSTPPAPPV
CCCCCEEECEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKAAPADKAPASDKQLTVKTGDTAGRIAAENKPASVSLDQMLVALLRSNPNAFIGGNVNR
CCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEECCCHHH
LKSGAVLEMPSDEAASAIPPREATQTIVAQSRDFNNFRRKLAESVPAAQVASADRQAGGK
HCCCCEEECCCCHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCE
VQAKVEDRTPANTTPDKLTLSKGAVQGKAATEDKIAKDRQAQDASARVAELSKNISDLNK
EEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVAPAPVATASAAKAPGVALPAPSGLAAPAPAPVPPAAAAANSAQPGTAGSPVSTPAAP
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
ASAAIAVPAIPAASAAAAAPIAPASAADASPPVAAAVPPKKPVVVAPPPPEPSLMDGLLE
CCCEEEECCCCCCHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCHHHHHHHHC
NPLTLPLAGGLLALLAGFGFYRYRQRSNPAQVDSSFLESRLQPDSFFGASGGQRIDTNEG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
NATGSSLVYSPSQLDAAGDVDPVAEADVYLAYGRDLQAEEILKEAMRTSPTRVAIHAKLM
CCCCCEEEECCHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHH
EIYAKRRDTKAFEAVAVEAFNLTQGSGPDWAYISEMGRELDPANPMYQPGGQPVAAGKGG
HHHHHHCCCHHHHHHEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC
GAAAFSAASATVARNAPPAHAAPVAPVVDVDLDLDFSLGDAEDAATIPVAPPTPPVRSAP
CHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEECCCCCCCCCCCCEECCCCCCCCCCCCC
PRPPEPPVAAKPAPAPALADLDMDFGSATVSLPEIATPAPASKPAAAPAIEMDFPSAGLN
CCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCC
FTPEPTASSKPVLATRAATAPAPASSDSGMLEFDLGSLSLDLDDGPATESPVHAQAATSS
CCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCHHCCCCC
DPLETKFQLAEEFRSLGDPDGARSLAEEVLAEAKGPLKVKAQAFLNALA
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCC
>Mature Secondary Structure
MNHRGRWRIGALASAIALLGSLASLEAHALALGRITVQSALGEPLRAEIDIADITADEAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHH
SLKAGVASADTFKAAGLEYTAALSGLQINLQRRTDGRAYLRLTSSRPVNEPFVDLILEAS
HHHHCCCCCCHHHHCCCCHHHHHCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHCC
WASGRITRDYTMLFDPPNLRSAGPAVAPTAPQLSRPVPPTAAAPARTATPAPSTPPAPPV
CCCCCEEECEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKAAPADKAPASDKQLTVKTGDTAGRIAAENKPASVSLDQMLVALLRSNPNAFIGGNVNR
CCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEECCCHHH
LKSGAVLEMPSDEAASAIPPREATQTIVAQSRDFNNFRRKLAESVPAAQVASADRQAGGK
HCCCCEEECCCCHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCE
VQAKVEDRTPANTTPDKLTLSKGAVQGKAATEDKIAKDRQAQDASARVAELSKNISDLNK
EEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVAPAPVATASAAKAPGVALPAPSGLAAPAPAPVPPAAAAANSAQPGTAGSPVSTPAAP
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
ASAAIAVPAIPAASAAAAAPIAPASAADASPPVAAAVPPKKPVVVAPPPPEPSLMDGLLE
CCCEEEECCCCCCHHHHCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCHHHHHHHHC
NPLTLPLAGGLLALLAGFGFYRYRQRSNPAQVDSSFLESRLQPDSFFGASGGQRIDTNEG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
NATGSSLVYSPSQLDAAGDVDPVAEADVYLAYGRDLQAEEILKEAMRTSPTRVAIHAKLM
CCCCCEEEECCHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEHHHHHH
EIYAKRRDTKAFEAVAVEAFNLTQGSGPDWAYISEMGRELDPANPMYQPGGQPVAAGKGG
HHHHHHCCCHHHHHHEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC
GAAAFSAASATVARNAPPAHAAPVAPVVDVDLDLDFSLGDAEDAATIPVAPPTPPVRSAP
CHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEECCCCCCCCCCCCEECCCCCCCCCCCCC
PRPPEPPVAAKPAPAPALADLDMDFGSATVSLPEIATPAPASKPAAAPAIEMDFPSAGLN
CCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCC
FTPEPTASSKPVLATRAATAPAPASSDSGMLEFDLGSLSLDLDDGPATESPVHAQAATSS
CCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCHHCCCCC
DPLETKFQLAEEFRSLGDPDGARSLAEEVLAEAKGPLKVKAQAFLNALA
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA