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The map label for this gene is ywbI [H]

Identifier: 91789458

GI number: 91789458

Start: 3808213

End: 3809205

Strand: Direct

Name: ywbI [H]

Synonym: Bpro_3607

Alternate gene names: 91789458

Gene position: 3808213-3809205 (Clockwise)

Preceding gene: 91789457

Following gene: 91789459

Centisome position: 73.23

GC content: 64.25

Gene sequence:

>993_bases
ATGACTTTAACCCCCATGAAAAGCTCGGAACGTAACTTTGCCCGCCGCATTGACCTGACTTCGCTGCAATTGTTTGTCGC
GGTGTGCGAGCTCGGCAGCATTGGCAAGGCGGCCGAACGCGAATTCATCGCGGCATCGGCCGTCAGCAAGCGCCTCAGCG
ACCTGGAGGCTGCGCTGGACACGCCGCTGCTGTACCGCCACACCCGCGGCGTCGACTTGACACCCGCCGGGCAAAGCCTG
TTGCACCATGCGCGGTCCGTGCTTTTCAGCCTGGAAAAAATGCAGGGCGAACTCAGCGAGTACGCCGCCGGCGTGCGCGG
CCATGTGCGGGTACACGCCAGCATTTCGGCGATCGTGCAGTTTTTACCCGAAGACCTGGGCGCCTTCATCCGCCGCCATT
CCGAAATCAAGATTGACCTGGAAGAACACCTGAGTACGGAAGTCGTGCGCGCCGTGCAGGAGGGCGCTGCGGACCTGGGT
ATCTGCAACACGGCCGATGGGGTGGGCGACCTGCAGACACTGCCTTACCGACAAGACCAGCTGGTGCTGATCGTGCCGCG
CGGCCATGTGCTGGGCGCGCAGGATGCCATCGCGTTTGAAGACAGCCTGGAGTTCGACCATGTGGGCCTGCACTCGAACA
GCTCGATATACCTGGCCATGCGCGAGGCCGCCGCGGCGCTGGGCCGCACCATCAAGCTGCGCATCCATGTCACGGGCCTG
GACGCCATGTGCCGCATGATCCACAACGGCCTGGGCGTGGGCGTGATGCCGCAGCGCGCCTTCGAACTCATGCATGACGT
GGGCGAGCTGGAATCCATCGCCCTGACGGATGACTGGGCAGCGCGCCAGATCCAGCTGGTGGCGCGGGATTTTTCCACCC
TGCCCCTGACTGCCCGCCTGCTGGTCGAGCACCTGACCCTGCCCGCGCCCGCCGCGAAGCCCGCAAAAACGCTTGCAAAA
ACCACAGTGGCAGGTGCCCGCTCACCCGCCTAA

Upstream 100 bases:

>100_bases
ATTGCCGTGGTCCCAGTTCACCGGCAAGCCACCCATCGCATATCGCGATGACAAAACGATGGATATCAGTTCAAAATACA
GGGGTACATCGTGAACCGCG

Downstream 100 bases:

>100_bases
AATTGAAAACCACGAAGGAAAACCATGGGACGCACCCTCTACGACAAAATCTGGGACGAGCACGTTGTTCACACCGAAGA
AGACGGCACGTCCATTCTTT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MTLTPMKSSERNFARRIDLTSLQLFVAVCELGSIGKAAEREFIAASAVSKRLSDLEAALDTPLLYRHTRGVDLTPAGQSL
LHHARSVLFSLEKMQGELSEYAAGVRGHVRVHASISAIVQFLPEDLGAFIRRHSEIKIDLEEHLSTEVVRAVQEGAADLG
ICNTADGVGDLQTLPYRQDQLVLIVPRGHVLGAQDAIAFEDSLEFDHVGLHSNSSIYLAMREAAAALGRTIKLRIHVTGL
DAMCRMIHNGLGVGVMPQRAFELMHDVGELESIALTDDWAARQIQLVARDFSTLPLTARLLVEHLTLPAPAAKPAKTLAK
TTVAGARSPA

Sequences:

>Translated_330_residues
MTLTPMKSSERNFARRIDLTSLQLFVAVCELGSIGKAAEREFIAASAVSKRLSDLEAALDTPLLYRHTRGVDLTPAGQSL
LHHARSVLFSLEKMQGELSEYAAGVRGHVRVHASISAIVQFLPEDLGAFIRRHSEIKIDLEEHLSTEVVRAVQEGAADLG
ICNTADGVGDLQTLPYRQDQLVLIVPRGHVLGAQDAIAFEDSLEFDHVGLHSNSSIYLAMREAAAALGRTIKLRIHVTGL
DAMCRMIHNGLGVGVMPQRAFELMHDVGELESIALTDDWAARQIQLVARDFSTLPLTARLLVEHLTLPAPAAKPAKTLAK
TTVAGARSPA
>Mature_329_residues
TLTPMKSSERNFARRIDLTSLQLFVAVCELGSIGKAAEREFIAASAVSKRLSDLEAALDTPLLYRHTRGVDLTPAGQSLL
HHARSVLFSLEKMQGELSEYAAGVRGHVRVHASISAIVQFLPEDLGAFIRRHSEIKIDLEEHLSTEVVRAVQEGAADLGI
CNTADGVGDLQTLPYRQDQLVLIVPRGHVLGAQDAIAFEDSLEFDHVGLHSNSSIYLAMREAAAALGRTIKLRIHVTGLD
AMCRMIHNGLGVGVMPQRAFELMHDVGELESIALTDDWAARQIQLVARDFSTLPLTARLLVEHLTLPAPAAKPAKTLAKT
TVAGARSPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI145693105, Length=240, Percent_Identity=25, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788748, Length=286, Percent_Identity=26.9230769230769, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788887, Length=289, Percent_Identity=25.2595155709343, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787806, Length=302, Percent_Identity=24.1721854304636, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081904, Length=159, Percent_Identity=30.8176100628931, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787530, Length=258, Percent_Identity=24.8062015503876, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786401, Length=140, Percent_Identity=32.1428571428571, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786713, Length=95, Percent_Identity=41.0526315789474, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787601, Length=157, Percent_Identity=25.4777070063694, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1787879, Length=286, Percent_Identity=25.1748251748252, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI157672245, Length=178, Percent_Identity=25.2808988764045, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35782; Mature: 35650

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTPMKSSERNFARRIDLTSLQLFVAVCELGSIGKAAEREFIAASAVSKRLSDLEAALD
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
TPLLYRHTRGVDLTPAGQSLLHHARSVLFSLEKMQGELSEYAAGVRGHVRVHASISAIVQ
CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
FLPEDLGAFIRRHSEIKIDLEEHLSTEVVRAVQEGAADLGICNTADGVGDLQTLPYRQDQ
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
LVLIVPRGHVLGAQDAIAFEDSLEFDHVGLHSNSSIYLAMREAAAALGRTIKLRIHVTGL
EEEEECCCCEECCCCCEEECCCCCCCEECCCCCCEEEEEEHHHHHHHCCEEEEEEEEECH
DAMCRMIHNGLGVGVMPQRAFELMHDVGELESIALTDDWAARQIQLVARDFSTLPLTARL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCCHHHHH
LVEHLTLPAPAAKPAKTLAKTTVAGARSPA
HHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLTPMKSSERNFARRIDLTSLQLFVAVCELGSIGKAAEREFIAASAVSKRLSDLEAALD
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
TPLLYRHTRGVDLTPAGQSLLHHARSVLFSLEKMQGELSEYAAGVRGHVRVHASISAIVQ
CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
FLPEDLGAFIRRHSEIKIDLEEHLSTEVVRAVQEGAADLGICNTADGVGDLQTLPYRQDQ
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
LVLIVPRGHVLGAQDAIAFEDSLEFDHVGLHSNSSIYLAMREAAAALGRTIKLRIHVTGL
EEEEECCCCEECCCCCEEECCCCCCCEECCCCCCEEEEEEHHHHHHHCCEEEEEEEEECH
DAMCRMIHNGLGVGVMPQRAFELMHDVGELESIALTDDWAARQIQLVARDFSTLPLTARL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCCHHHHH
LVEHLTLPAPAAKPAKTLAKTTVAGARSPA
HHHHHCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]